RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 TRAPPC4Q9Y296 219 aa18.88■□□□□ 0.61
TPM1-208ENST00000404484 RPH3AQ9Y2J0 694 aaPredicted RBP18.88■□□□□ 0.61
TPM1-208ENST00000404484 A0A1W2PRG6 482 aa18.87■□□□□ 0.61
TPM1-208ENST00000404484 OR2M5A3KFT3 312 aa18.87■□□□□ 0.61
TPM1-208ENST00000404484 F10P00742 488 aa18.87■□□□□ 0.61
TPM1-208ENST00000404484 IGHMP01871 453 aa18.87■□□□□ 0.61
TPM1-208ENST00000404484 IMPDH2P12268 514 aa18.87■□□□□ 0.61
TPM1-208ENST00000404484 AHCYP23526 432 aa18.87■□□□□ 0.61
TPM1-208ENST00000404484 PSMB9P28065 219 aa18.87■□□□□ 0.61
TPM1-208ENST00000404484 GPR85P60893 370 aa18.87■□□□□ 0.61
TPM1-208ENST00000404484 RPS7P62081 194 aaKnown RBP18.87■□□□□ 0.61
TPM1-208ENST00000404484 POU4F2Q12837 409 aa18.87■□□□□ 0.61
TPM1-208ENST00000404484 KRR1Q13601 381 aaKnown RBP18.87■□□□□ 0.61
TPM1-208ENST00000404484 ADCK1Q86TW2 530 aa18.87■□□□□ 0.61
TPM1-208ENST00000404484 CYB561A3Q8NBI2 242 aa18.87■□□□□ 0.61
TPM1-208ENST00000404484 OR14L1PQ8NHC6 308 aa18.87■□□□□ 0.61
TPM1-208ENST00000404484 RASD2Q96D21 266 aa18.87■□□□□ 0.61
TPM1-208ENST00000404484 DNAJA3Q96EY1 480 aa18.87■□□□□ 0.61
TPM1-208ENST00000404484 OR5B2Q96R09 309 aa18.87■□□□□ 0.61
TPM1-208ENST00000404484 MND1Q9BWT6 205 aa18.87■□□□□ 0.61
TPM1-208ENST00000404484 OR2B2Q9GZK3 357 aa18.87■□□□□ 0.61
TPM1-208ENST00000404484 MED20Q9H944 212 aa18.87■□□□□ 0.61
TPM1-208ENST00000404484 PLA2G3Q9NZ20 509 aa18.87■□□□□ 0.61
TPM1-208ENST00000404484 EXOGQ9Y2C4 368 aaKnown RBP18.87■□□□□ 0.61
TPM1-208ENST00000404484 PCDHGA9Q9Y5G4 932 aaKnown RBP18.87■□□□□ 0.61
TPM1-208ENST00000404484 CEPT1Q9Y6K0 416 aa18.87■□□□□ 0.61
TPM1-208ENST00000404484 NPIPB13A6NJU9 1138 aa18.86■□□□□ 0.61
TPM1-208ENST00000404484 B8ZZF3 427 aa18.86■□□□□ 0.61
TPM1-208ENST00000404484 NPIPB4C9JG80 1138 aa18.86■□□□□ 0.61
TPM1-208ENST00000404484 C11orf98E9PRG8 122 aa18.86■□□□□ 0.61
TPM1-208ENST00000404484 ZNF701M0R085 212 aaPredicted RBP18.86■□□□□ 0.61
TPM1-208ENST00000404484 XKRYO14609 159 aa18.86■□□□□ 0.61
TPM1-208ENST00000404484 NOL3O60936 208 aaKnown RBP18.86■□□□□ 0.61
TPM1-208ENST00000404484 INMTO95050 263 aa18.86■□□□□ 0.61
TPM1-208ENST00000404484 SLC2A5P22732 501 aa18.86■□□□□ 0.61
TPM1-208ENST00000404484 SLC25A1P53007 311 aa18.86■□□□□ 0.61
TPM1-208ENST00000404484 TMEM176BQ3YBM2 270 aaPredicted RBP18.86■□□□□ 0.61
TPM1-208ENST00000404484 SLC35D3Q5M8T2 416 aa18.86■□□□□ 0.61
TPM1-208ENST00000404484 SLC25A25Q6KCM7 469 aa18.86■□□□□ 0.61
TPM1-208ENST00000404484 CLVS1Q8IUQ0 354 aaPredicted RBP18.86■□□□□ 0.61
TPM1-208ENST00000404484 NPEPL1Q8NDH3 523 aa18.86■□□□□ 0.61
TPM1-208ENST00000404484 MDS2Q8NDY4 140 aa18.86■□□□□ 0.61
TPM1-208ENST00000404484 ZNF420Q8TAQ5 688 aaPredicted RBP18.86■□□□□ 0.61
TPM1-208ENST00000404484 HAS2Q92819 552 aa18.86■□□□□ 0.61
TPM1-208ENST00000404484 TSPAN32Q96QS1 320 aa18.86■□□□□ 0.61
TPM1-208ENST00000404484 SNX18Q96RF0 628 aa18.86■□□□□ 0.61
TPM1-208ENST00000404484 OR51V1Q9H2C8 321 aa18.86■□□□□ 0.61
TPM1-208ENST00000404484 TXNIPQ9H3M7 391 aa18.86■□□□□ 0.61
TPM1-208ENST00000404484 TMEM185BQ9H7F4 350 aa18.86■□□□□ 0.61
TPM1-208ENST00000404484 HAO2Q9NYQ3 351 aa18.86■□□□□ 0.61
TPM1-208ENST00000404484 A0A1W2PNV4 684 aa18.85■□□□□ 0.61
TPM1-208ENST00000404484 LINC01387J3KSC0 135 aa18.85■□□□□ 0.61
TPM1-208ENST00000404484 MYL12BO14950 172 aa18.85■□□□□ 0.61
TPM1-208ENST00000404484 NME2P1O60361 137 aa18.85■□□□□ 0.61
TPM1-208ENST00000404484 PMS2P2O95744 297 aa18.85■□□□□ 0.61
TPM1-208ENST00000404484 RENP00797 406 aa18.85■□□□□ 0.61
TPM1-208ENST00000404484 SP1P08047 785 aa18.85■□□□□ 0.61
TPM1-208ENST00000404484 NME2P22392 152 aa18.85■□□□□ 0.61
TPM1-208ENST00000404484 GDF1P27539 372 aa18.85■□□□□ 0.61
TPM1-208ENST00000404484 SFTPDP35247 375 aa18.85■□□□□ 0.61
TPM1-208ENST00000404484 GP2P55259 537 aaKnown RBP18.85■□□□□ 0.61
TPM1-208ENST00000404484 OR2B6P58173 313 aa18.85■□□□□ 0.61
TPM1-208ENST00000404484 RPL27P61353 136 aaKnown RBP18.85■□□□□ 0.61
TPM1-208ENST00000404484 RAC1P63000 192 aa18.85■□□□□ 0.61
TPM1-208ENST00000404484 SLC35A1P78382 337 aa18.85■□□□□ 0.61
TPM1-208ENST00000404484 ARG2P78540 354 aa18.85■□□□□ 0.61
TPM1-208ENST00000404484 FOXO1Q12778 655 aa18.85■□□□□ 0.61
TPM1-208ENST00000404484 C1DQ13901 141 aaKnown RBP18.85■□□□□ 0.61
TPM1-208ENST00000404484 FAM205BPQ63HN1 556 aa18.85■□□□□ 0.61
TPM1-208ENST00000404484 LEG1Q6P5S2 330 aa18.85■□□□□ 0.61
TPM1-208ENST00000404484 ARIH2OSQ8N7S6 290 aa18.85■□□□□ 0.61
TPM1-208ENST00000404484 PROKR2Q8NFJ6 384 aa18.85■□□□□ 0.61
TPM1-208ENST00000404484 MIB2Q96AX9 1013 aa18.85■□□□□ 0.61
TPM1-208ENST00000404484 NMNAT3Q96T66 252 aa18.85■□□□□ 0.61
TPM1-208ENST00000404484 TEAD3Q99594 435 aa18.85■□□□□ 0.61
TPM1-208ENST00000404484 ZNF552Q9H707 407 aaPredicted RBP18.85■□□□□ 0.61
TPM1-208ENST00000404484 FANCFQ9NPI8 374 aa18.85■□□□□ 0.61
TPM1-208ENST00000404484 TNFRSF10DQ9UBN6 386 aa18.85■□□□□ 0.61
TPM1-208ENST00000404484 SEC14L4Q9UDX3 406 aa18.85■□□□□ 0.61
TPM1-208ENST00000404484 RSL24D1Q9UHA3 163 aaKnown RBP18.85■□□□□ 0.61
TPM1-208ENST00000404484 CCDC182A6NF36 153 aa18.85■□□□□ 0.61
TPM1-208ENST00000404484 KLRC4-KLRK1H3BQV0 150 aa18.85■□□□□ 0.61
TPM1-208ENST00000404484 H3BSA7 217 aa18.85■□□□□ 0.61
TPM1-208ENST00000404484 SEC14L5O43304 696 aa18.85■□□□□ 0.61
TPM1-208ENST00000404484 TRMUO75648 421 aaKnown RBP18.85■□□□□ 0.61
TPM1-208ENST00000404484 DAP3P51398 398 aaKnown RBP18.85■□□□□ 0.61
TPM1-208ENST00000404484 SLC16A1P53985 500 aa18.85■□□□□ 0.61
TPM1-208ENST00000404484 FOXK1P85037 733 aa18.85■□□□□ 0.61
TPM1-208ENST00000404484 TMPPEQ6ZT21 453 aa18.85■□□□□ 0.61
TPM1-208ENST00000404484 ASB18Q6ZVZ8 466 aa18.85■□□□□ 0.61
TPM1-208ENST00000404484 DDOQ99489 341 aa18.85■□□□□ 0.61
TPM1-208ENST00000404484 JAM3Q9BX67 310 aa18.85■□□□□ 0.61
TPM1-208ENST00000404484 HCAR1Q9BXC0 346 aa18.85■□□□□ 0.61
TPM1-208ENST00000404484 NMNAT2Q9BZQ4 307 aa18.85■□□□□ 0.61
TPM1-208ENST00000404484 ZNF346Q9UL40 294 aaKnown RBP18.85■□□□□ 0.61
TPM1-208ENST00000404484 TNRC6AQ8NDV7 1962 aaKnown RBP18.84■□□□□ 0.61
TPM1-208ENST00000404484 A6NIZ1 184 aa18.84■□□□□ 0.61
TPM1-208ENST00000404484 SULT2B1O00204 365 aa18.84■□□□□ 0.61
TPM1-208ENST00000404484 SERPINI2O75830 405 aa18.84■□□□□ 0.61
TPM1-208ENST00000404484 PTHP01270 115 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms