RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 PTGDSP41222 190 aa13.71□□□□□ -0.21
COL25A1-201ENST00000399126 KLHL22Q53GT1 634 aa13.71□□□□□ -0.21
COL25A1-201ENST00000399126 C3orf38Q5JPI3 329 aa13.71□□□□□ -0.21
COL25A1-201ENST00000399126 ATCAYQ86WG3 371 aa13.71□□□□□ -0.21
COL25A1-201ENST00000399126 GATAD2BQ8WXI9 593 aa13.71□□□□□ -0.21
COL25A1-201ENST00000399126 TM9SF4Q92544 642 aa13.71□□□□□ -0.21
COL25A1-201ENST00000399126 TBX5Q99593 518 aa13.71□□□□□ -0.21
COL25A1-201ENST00000399126 CHCHD6Q9BRQ6 235 aa13.71□□□□□ -0.21
COL25A1-201ENST00000399126 KATNB1Q9BVA0 655 aa13.71□□□□□ -0.21
COL25A1-201ENST00000399126 MRPL39Q9NYK5 338 aaKnown RBP13.71□□□□□ -0.21
COL25A1-201ENST00000399126 TAS2R10Q9NYW0 307 aa13.71□□□□□ -0.21
COL25A1-201ENST00000399126 H2AFY2Q9P0M6 372 aaPredicted RBP13.71□□□□□ -0.21
COL25A1-201ENST00000399126 CCDC182A6NF36 153 aa13.71□□□□□ -0.22
COL25A1-201ENST00000399126 RIIAD1A6NNX1 92 aa13.71□□□□□ -0.22
COL25A1-201ENST00000399126 PRR23D1E9PI22 279 aaPredicted RBP13.71□□□□□ -0.22
COL25A1-201ENST00000399126 PRR23D2P0DMB1 279 aaPredicted RBP13.71□□□□□ -0.22
COL25A1-201ENST00000399126 OTX2P32243 289 aa13.71□□□□□ -0.22
COL25A1-201ENST00000399126 RPS7P62081 194 aaKnown RBP13.71□□□□□ -0.22
COL25A1-201ENST00000399126 GALEQ14376 348 aa13.71□□□□□ -0.22
COL25A1-201ENST00000399126 SLC22A16Q86VW1 577 aa13.71□□□□□ -0.22
COL25A1-201ENST00000399126 ADGRG3Q86Y34 549 aa13.71□□□□□ -0.22
COL25A1-201ENST00000399126 PROKR2Q8NFJ6 384 aa13.71□□□□□ -0.22
COL25A1-201ENST00000399126 ZNRF4Q8WWF5 429 aa13.71□□□□□ -0.22
COL25A1-201ENST00000399126 TMCO6Q96DC7 493 aa13.71□□□□□ -0.22
COL25A1-201ENST00000399126 ARL5BQ96KC2 179 aa13.71□□□□□ -0.22
COL25A1-201ENST00000399126 ZNF649Q9BS31 505 aa13.71□□□□□ -0.22
COL25A1-201ENST00000399126 LAMA5O15230 3695 aa13.71□□□□□ -0.22
COL25A1-201ENST00000399126 TMEM72A0PK05 275 aa13.7□□□□□ -0.22
COL25A1-201ENST00000399126 PLD2O14939 933 aa13.7□□□□□ -0.22
COL25A1-201ENST00000399126 DKK1O94907 266 aa13.7□□□□□ -0.22
COL25A1-201ENST00000399126 MT-CO3P00414 261 aa13.7□□□□□ -0.22
COL25A1-201ENST00000399126 ASAH2BP0C7U1 165 aa13.7□□□□□ -0.22
COL25A1-201ENST00000399126 MYL12AP19105 171 aa13.7□□□□□ -0.22
COL25A1-201ENST00000399126 C17orf67Q0P5P2 114 aa13.7□□□□□ -0.22
COL25A1-201ENST00000399126 ZNF791Q3KP31 576 aaPredicted RBP13.7□□□□□ -0.22
COL25A1-201ENST00000399126 HES3Q5TGS1 186 aa13.7□□□□□ -0.22
COL25A1-201ENST00000399126 C6orf15Q6UXA7 325 aaPredicted RBP13.7□□□□□ -0.22
COL25A1-201ENST00000399126 MEPCEQ7L2J0 689 aaKnown RBP13.7□□□□□ -0.22
COL25A1-201ENST00000399126 TAAR9Q96RI9 348 aa13.7□□□□□ -0.22
COL25A1-201ENST00000399126 SECISBP2Q96T21 854 aaKnown RBP13.7□□□□□ -0.22
COL25A1-201ENST00000399126 NMNAT3Q96T66 252 aa13.7□□□□□ -0.22
COL25A1-201ENST00000399126 TMEM246Q9BRR3 403 aa13.7□□□□□ -0.22
COL25A1-201ENST00000399126 FAM86C1Q9NVL1 165 aa13.7□□□□□ -0.22
COL25A1-201ENST00000399126 ZNF221Q9UK13 617 aa13.7□□□□□ -0.22
COL25A1-201ENST00000399126 TCFL5Q9UL49 500 aa13.7□□□□□ -0.22
COL25A1-201ENST00000399126 RPH3AQ9Y2J0 694 aaPredicted RBP13.7□□□□□ -0.22
COL25A1-201ENST00000399126 TMED7-TICAM2A0A0A6YYA0 188 aa13.7□□□□□ -0.22
COL25A1-201ENST00000399126 C12orf71A8MTZ7 269 aa13.7□□□□□ -0.22
COL25A1-201ENST00000399126 SUSD5O60279 629 aa13.7□□□□□ -0.22
COL25A1-201ENST00000399126 DLGAP3O95886 979 aa13.7□□□□□ -0.22
COL25A1-201ENST00000399126 LALBAP00709 142 aa13.7□□□□□ -0.22
COL25A1-201ENST00000399126 FBXO45P0C2W1 286 aa13.7□□□□□ -0.22
COL25A1-201ENST00000399126 HK1P19367 917 aa13.7□□□□□ -0.22
COL25A1-201ENST00000399126 SLC2A5P22732 501 aa13.7□□□□□ -0.22
COL25A1-201ENST00000399126 PRAMEF20Q5VT98 475 aa13.7□□□□□ -0.22
COL25A1-201ENST00000399126 LIPKQ5VXJ0 399 aa13.7□□□□□ -0.22
COL25A1-201ENST00000399126 TMEM99Q8N816 258 aa13.7□□□□□ -0.22
COL25A1-201ENST00000399126 ZFP41Q8N8Y5 198 aa13.7□□□□□ -0.22
COL25A1-201ENST00000399126 FAM98AQ8NCA5 519 aaKnown RBP13.7□□□□□ -0.22
COL25A1-201ENST00000399126 MARVELD3Q96A59 401 aa13.7□□□□□ -0.22
COL25A1-201ENST00000399126 PTDSS2Q9BVG9 487 aa13.7□□□□□ -0.22
COL25A1-201ENST00000399126 NRIP3Q9NQ35 241 aa13.7□□□□□ -0.22
COL25A1-201ENST00000399126 TMED7Q9Y3B3 224 aa13.7□□□□□ -0.22
COL25A1-201ENST00000399126 OR6C65A6NJZ3 312 aa13.69□□□□□ -0.22
COL25A1-201ENST00000399126 SCG5P05408 212 aa13.69□□□□□ -0.22
COL25A1-201ENST00000399126 CYC1P08574 325 aa13.69□□□□□ -0.22
COL25A1-201ENST00000399126 F8A1P23610 371 aa13.69□□□□□ -0.22
COL25A1-201ENST00000399126 IFITM3Q01628 133 aa13.69□□□□□ -0.22
COL25A1-201ENST00000399126 RNLSQ5VYX0 342 aa13.69□□□□□ -0.22
COL25A1-201ENST00000399126 IL20RBQ6UXL0 311 aa13.69□□□□□ -0.22
COL25A1-201ENST00000399126 PPP1R32Q7Z5V6 425 aa13.69□□□□□ -0.22
COL25A1-201ENST00000399126 RNF138Q8WVD3 245 aa13.69□□□□□ -0.22
COL25A1-201ENST00000399126 SLC25A36Q96CQ1 311 aa13.69□□□□□ -0.22
COL25A1-201ENST00000399126 SPACA9Q96E40 222 aaPredicted RBP13.69□□□□□ -0.22
COL25A1-201ENST00000399126 TRMT61AQ96FX7 289 aaKnown RBP13.69□□□□□ -0.22
COL25A1-201ENST00000399126 Q96M85 177 aa13.69□□□□□ -0.22
COL25A1-201ENST00000399126 TEAD3Q99594 435 aa13.69□□□□□ -0.22
COL25A1-201ENST00000399126 SPRY4Q9C004 299 aa13.69□□□□□ -0.22
COL25A1-201ENST00000399126 METTL7AQ9H8H3 244 aa13.69□□□□□ -0.22
COL25A1-201ENST00000399126 AKIP1Q9NQ31 210 aa13.69□□□□□ -0.22
COL25A1-201ENST00000399126 GLRX2Q9NS18 164 aa13.69□□□□□ -0.22
COL25A1-201ENST00000399126 HPF1Q9NWY4 346 aa13.69□□□□□ -0.22
COL25A1-201ENST00000399126 HIF3AQ9Y2N7 669 aa13.69□□□□□ -0.22
COL25A1-201ENST00000399126 YARS2Q9Y2Z4 477 aaKnown RBP13.69□□□□□ -0.22
COL25A1-201ENST00000399126 PMF1-BGLAPU3KQ54 211 aa13.69□□□□□ -0.22
COL25A1-201ENST00000399126 FREM3P0C091 2139 aa13.69□□□□□ -0.22
COL25A1-201ENST00000399126 NSG1A0A0A6YYJ2 146 aa13.69□□□□□ -0.22
COL25A1-201ENST00000399126 TEX13CA0A0J9YWL9 993 aa13.69□□□□□ -0.22
COL25A1-201ENST00000399126 CCNKO75909 580 aa13.69□□□□□ -0.22
COL25A1-201ENST00000399126 E2F1Q01094 437 aa13.69□□□□□ -0.22
COL25A1-201ENST00000399126 RPL18Q07020 188 aaKnown RBP13.69□□□□□ -0.22
COL25A1-201ENST00000399126 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.69□□□□□ -0.22
COL25A1-201ENST00000399126 CARTPTQ16568 116 aa13.69□□□□□ -0.22
COL25A1-201ENST00000399126 GID4Q8IVV7 300 aa13.69□□□□□ -0.22
COL25A1-201ENST00000399126 LINC00518Q8N0U6 118 aa13.69□□□□□ -0.22
COL25A1-201ENST00000399126 LRRC75AQ8NAA5 344 aa13.69□□□□□ -0.22
COL25A1-201ENST00000399126 LIN37Q96GY3 246 aaPredicted RBP13.69□□□□□ -0.22
COL25A1-201ENST00000399126 CCNL2Q96S94 520 aaPredicted RBP13.69□□□□□ -0.22
COL25A1-201ENST00000399126 ZNF346Q9UL40 294 aaKnown RBP13.69□□□□□ -0.22
COL25A1-201ENST00000399126 EXOGQ9Y2C4 368 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms