RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 RAB35Q15286 201 aa11.69□□□□□ -0.54
VCX3A-202ENST00000398729 CEACAM16Q2WEN9 425 aa11.69□□□□□ -0.54
VCX3A-202ENST00000398729 MS4A18Q3C1V0 323 aa11.69□□□□□ -0.54
VCX3A-202ENST00000398729 C3orf36Q3SXR2 165 aa11.69□□□□□ -0.54
VCX3A-202ENST00000398729 COQ5Q5HYK3 327 aa11.69□□□□□ -0.54
VCX3A-202ENST00000398729 ENTPD8Q5MY95 495 aa11.69□□□□□ -0.54
VCX3A-202ENST00000398729 LINC00114Q6XXX2 140 aa11.69□□□□□ -0.54
VCX3A-202ENST00000398729 OR8J3Q8NGG0 315 aa11.69□□□□□ -0.54
VCX3A-202ENST00000398729 ADAMTS16Q8TE57 1224 aa11.69□□□□□ -0.54
VCX3A-202ENST00000398729 TAMM41Q96BW9 452 aa11.69□□□□□ -0.54
VCX3A-202ENST00000398729 LRRC58Q96CX6 371 aa11.69□□□□□ -0.54
VCX3A-202ENST00000398729 MOGAT1Q96PD6 335 aa11.69□□□□□ -0.54
VCX3A-202ENST00000398729 OR2M2Q96R28 347 aa11.69□□□□□ -0.54
VCX3A-202ENST00000398729 ECSITQ9BQ95 431 aa11.69□□□□□ -0.54
VCX3A-202ENST00000398729 KATNB1Q9BVA0 655 aa11.69□□□□□ -0.54
VCX3A-202ENST00000398729 CRLF2Q9HC73 371 aa11.69□□□□□ -0.54
VCX3A-202ENST00000398729 GPR35Q9HC97 309 aa11.69□□□□□ -0.54
VCX3A-202ENST00000398729 NOX1Q9Y5S8 564 aa11.69□□□□□ -0.54
VCX3A-202ENST00000398729 ALPK2Q86TB3 2170 aa11.68□□□□□ -0.54
VCX3A-202ENST00000398729 TRAPPC13A5PLN9 417 aa11.68□□□□□ -0.54
VCX3A-202ENST00000398729 RNF212BA8MTL3 300 aa11.68□□□□□ -0.54
VCX3A-202ENST00000398729 M0R3G1 203 aa11.68□□□□□ -0.54
VCX3A-202ENST00000398729 MRASO14807 208 aa11.68□□□□□ -0.54
VCX3A-202ENST00000398729 HPRP00739 348 aa11.68□□□□□ -0.54
VCX3A-202ENST00000398729 HLA-DOBP13765 273 aa11.68□□□□□ -0.54
VCX3A-202ENST00000398729 CD247P20963 164 aa11.68□□□□□ -0.54
VCX3A-202ENST00000398729 AHCYP23526 432 aa11.68□□□□□ -0.54
VCX3A-202ENST00000398729 TUBA1BP68363 451 aa11.68□□□□□ -0.54
VCX3A-202ENST00000398729 TUBA4AP68366 448 aa11.68□□□□□ -0.54
VCX3A-202ENST00000398729 SF3A3Q12874 501 aaKnown RBP eCLIP11.68□□□□□ -0.54
VCX3A-202ENST00000398729 NPTX1Q15818 432 aa11.68□□□□□ -0.54
VCX3A-202ENST00000398729 HSP90B2PQ58FF3 399 aa11.68□□□□□ -0.54
VCX3A-202ENST00000398729 RABL3Q5HYI8 236 aa11.68□□□□□ -0.54
VCX3A-202ENST00000398729 CARD17Q5XLA6 110 aa11.68□□□□□ -0.54
VCX3A-202ENST00000398729 REP15Q6BDI9 236 aa11.68□□□□□ -0.54
VCX3A-202ENST00000398729 TTC33Q6PID6 262 aaPredicted RBP11.68□□□□□ -0.54
VCX3A-202ENST00000398729 DNM1P46Q6ZS02 220 aa11.68□□□□□ -0.54
VCX3A-202ENST00000398729 TUBA1AQ71U36 451 aa11.68□□□□□ -0.54
VCX3A-202ENST00000398729 CCDC80Q76M96 950 aa11.68□□□□□ -0.54
VCX3A-202ENST00000398729 PXKQ7Z7A4 578 aa11.68□□□□□ -0.54
VCX3A-202ENST00000398729 CCDC36Q8IYA8 594 aa11.68□□□□□ -0.54
VCX3A-202ENST00000398729 TMEM123Q8N131 208 aa11.68□□□□□ -0.54
VCX3A-202ENST00000398729 FAM169BQ8N8A8 192 aa11.68□□□□□ -0.54
VCX3A-202ENST00000398729 PCYOX1LQ8NBM8 494 aa11.68□□□□□ -0.54
VCX3A-202ENST00000398729 MAPK1IP1LQ8NDC0 245 aa11.68□□□□□ -0.54
VCX3A-202ENST00000398729 OR5J2Q8NH18 312 aa11.68□□□□□ -0.54
VCX3A-202ENST00000398729 PROX1Q92786 737 aa11.68□□□□□ -0.54
VCX3A-202ENST00000398729 RHNO1Q9BSD3 238 aa11.68□□□□□ -0.54
VCX3A-202ENST00000398729 EMC6Q9BV81 110 aa11.68□□□□□ -0.54
VCX3A-202ENST00000398729 NELFAQ9H3P2 528 aa11.68□□□□□ -0.54
VCX3A-202ENST00000398729 B3GAT2Q9NPZ5 323 aa11.68□□□□□ -0.54
VCX3A-202ENST00000398729 SAR1AQ9NR31 198 aa11.68□□□□□ -0.54
VCX3A-202ENST00000398729 ZNF446Q9NWS9 450 aa11.68□□□□□ -0.54
VCX3A-202ENST00000398729 CRNNQ9UBG3 495 aaPredicted RBP11.68□□□□□ -0.54
VCX3A-202ENST00000398729 PMF1-BGLAPU3KQ54 211 aa11.68□□□□□ -0.54
VCX3A-202ENST00000398729 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.68□□□□□ -0.54
VCX3A-202ENST00000398729 SLC35F4A4IF30 521 aa11.67□□□□□ -0.54
VCX3A-202ENST00000398729 ZNF726A6NNF4 738 aa11.67□□□□□ -0.54
VCX3A-202ENST00000398729 ZNF99A8MXY4 864 aaPredicted RBP11.67□□□□□ -0.54
VCX3A-202ENST00000398729 LRRN3E7EW58 273 aa11.67□□□□□ -0.54
VCX3A-202ENST00000398729 H7C417 338 aa11.67□□□□□ -0.54
VCX3A-202ENST00000398729 FXYD1O00168 92 aa11.67□□□□□ -0.54
VCX3A-202ENST00000398729 PLPP3O14495 311 aa11.67□□□□□ -0.54
VCX3A-202ENST00000398729 OR6A2O95222 327 aa11.67□□□□□ -0.54
VCX3A-202ENST00000398729 IGLV1-44P01699 117 aa11.67□□□□□ -0.54
VCX3A-202ENST00000398729 CECR9P0C854 216 aa11.67□□□□□ -0.54
VCX3A-202ENST00000398729 ADORA3P0DMS8 318 aa11.67□□□□□ -0.54
VCX3A-202ENST00000398729 DSCR9P59020 149 aa11.67□□□□□ -0.54
VCX3A-202ENST00000398729 NAAAQ02083 359 aa11.67□□□□□ -0.54
VCX3A-202ENST00000398729 GUCY1A3Q02108 690 aa11.67□□□□□ -0.54
VCX3A-202ENST00000398729 CGB2Q6NT52 195 aa11.67□□□□□ -0.54
VCX3A-202ENST00000398729 ERICH5Q6P6B1 374 aa11.67□□□□□ -0.54
VCX3A-202ENST00000398729 WDR88Q6ZMY6 472 aa11.67□□□□□ -0.54
VCX3A-202ENST00000398729 SNX32Q86XE0 403 aa11.67□□□□□ -0.54
VCX3A-202ENST00000398729 CALHM3Q86XJ0 350 aa11.67□□□□□ -0.54
VCX3A-202ENST00000398729 RBM45Q8IUH3 476 aaKnown RBP11.67□□□□□ -0.54
VCX3A-202ENST00000398729 C20orf196Q8IYI0 205 aa11.67□□□□□ -0.54
VCX3A-202ENST00000398729 OR4D11Q8NGI4 311 aa11.67□□□□□ -0.54
VCX3A-202ENST00000398729 ZNF837Q96EG3 531 aaPredicted RBP11.67□□□□□ -0.54
VCX3A-202ENST00000398729 MPP4Q96JB8 637 aa11.67□□□□□ -0.54
VCX3A-202ENST00000398729 LRR1Q96L50 414 aa11.67□□□□□ -0.54
VCX3A-202ENST00000398729 PCDHAC1Q9H158 963 aa11.67□□□□□ -0.54
VCX3A-202ENST00000398729 GID8Q9NWU2 228 aa11.67□□□□□ -0.54
VCX3A-202ENST00000398729 MED29Q9NX70 200 aa11.67□□□□□ -0.54
VCX3A-202ENST00000398729 BAG5Q9UL15 447 aa11.67□□□□□ -0.54
VCX3A-202ENST00000398729 SLC7A7Q9UM01 511 aa11.67□□□□□ -0.54
VCX3A-202ENST00000398729 PLCE1Q9P212 2302 aa11.67□□□□□ -0.54
VCX3A-202ENST00000398729 LOC100653049A0A140TA62 436 aa11.66□□□□□ -0.54
VCX3A-202ENST00000398729 C11orf98E9PRG8 122 aa11.66□□□□□ -0.54
VCX3A-202ENST00000398729 SERPINI2O75830 405 aa11.66□□□□□ -0.54
VCX3A-202ENST00000398729 KRT34O76011 436 aa11.66□□□□□ -0.54
VCX3A-202ENST00000398729 LYPD3O95274 346 aa11.66□□□□□ -0.54
VCX3A-202ENST00000398729 CH25HO95992 272 aa11.66□□□□□ -0.54
VCX3A-202ENST00000398729 IFNA14P01570 189 aa11.66□□□□□ -0.54
VCX3A-202ENST00000398729 IGKV3-15P01624 115 aa11.66□□□□□ -0.54
VCX3A-202ENST00000398729 THY1P04216 161 aa11.66□□□□□ -0.54
VCX3A-202ENST00000398729 TP53P04637 393 aaPredicted RBP11.66□□□□□ -0.54
VCX3A-202ENST00000398729 CBR1P16152 277 aa11.66□□□□□ -0.54
VCX3A-202ENST00000398729 CAPZA2P47755 286 aa11.66□□□□□ -0.54
VCX3A-202ENST00000398729 IDH3GP51553 393 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms