RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 ZNF740Q8NDX6 193 aa1.84□□□□□ -2.11
CD47-203ENST00000398258 NPBQ8NG41 125 aa1.84□□□□□ -2.11
CD47-203ENST00000398258 KCNG3Q8TAE7 436 aa1.84□□□□□ -2.11
CD47-203ENST00000398258 FAM151AQ8WW52 585 aa1.84□□□□□ -2.11
CD47-203ENST00000398258 ARPC1AQ92747 370 aa1.84□□□□□ -2.11
CD47-203ENST00000398258 SMARCD2Q92925 531 aa1.84□□□□□ -2.11
CD47-203ENST00000398258 MARC2Q969Z3 335 aa1.84□□□□□ -2.11
CD47-203ENST00000398258 RPUSD4Q96CM3 377 aaKnown RBP1.84□□□□□ -2.11
CD47-203ENST00000398258 LRRC58Q96CX6 371 aa1.84□□□□□ -2.11
CD47-203ENST00000398258 MS4A4EQ96PG1 132 aa1.84□□□□□ -2.11
CD47-203ENST00000398258 OR8B4Q96RC9 309 aa1.84□□□□□ -2.11
CD47-203ENST00000398258 SORT1Q99523 831 aa1.84□□□□□ -2.11
CD47-203ENST00000398258 NRTNQ99748 197 aa1.84□□□□□ -2.11
CD47-203ENST00000398258 KCTD14Q9BQ13 255 aaPredicted RBP1.84□□□□□ -2.11
CD47-203ENST00000398258 RACGAP1Q9H0H5 632 aa1.84□□□□□ -2.11
CD47-203ENST00000398258 SRMSQ9H3Y6 488 aa1.84□□□□□ -2.11
CD47-203ENST00000398258 PDFQ9HBH1 243 aa1.84□□□□□ -2.11
CD47-203ENST00000398258 EML4Q9HC35 981 aaKnown RBP1.84□□□□□ -2.11
CD47-203ENST00000398258 CCL28Q9NRJ3 127 aa1.84□□□□□ -2.11
CD47-203ENST00000398258 KLHL28Q9NXS3 571 aa1.84□□□□□ -2.11
CD47-203ENST00000398258 SLC2A8Q9NY64 477 aa1.84□□□□□ -2.11
CD47-203ENST00000398258 CALYQ9NYX4 217 aa1.84□□□□□ -2.11
CD47-203ENST00000398258 NSD2O96028 1365 aa1.84□□□□□ -2.12
CD47-203ENST00000398258 C12orf71A8MTZ7 269 aa1.83□□□□□ -2.12
CD47-203ENST00000398258 CCL21O00585 134 aa1.83□□□□□ -2.12
CD47-203ENST00000398258 TRAF3IP2O43734 574 aaPredicted RBP1.83□□□□□ -2.12
CD47-203ENST00000398258 TOM1O60784 492 aa1.83□□□□□ -2.12
CD47-203ENST00000398258 CIB2O75838 187 aa1.83□□□□□ -2.12
CD47-203ENST00000398258 ACTL6AO96019 429 aa1.83□□□□□ -2.12
CD47-203ENST00000398258 UBTFL1P0CB47 393 aaPredicted RBP1.83□□□□□ -2.12
CD47-203ENST00000398258 CRISP2P16562 243 aa1.83□□□□□ -2.12
CD47-203ENST00000398258 TCN1P20061 433 aaPredicted RBP1.83□□□□□ -2.12
CD47-203ENST00000398258 GDI1P31150 447 aa1.83□□□□□ -2.12
CD47-203ENST00000398258 OTX1P32242 354 aaPredicted RBP1.83□□□□□ -2.12
CD47-203ENST00000398258 VDAC2P45880 294 aaPredicted RBP1.83□□□□□ -2.12
CD47-203ENST00000398258 CAV2P51636 162 aa1.83□□□□□ -2.12
CD47-203ENST00000398258 GPX6P59796 221 aa1.83□□□□□ -2.12
CD47-203ENST00000398258 PRPS1P60891 318 aa1.83□□□□□ -2.12
CD47-203ENST00000398258 TIMM10P62072 90 aa1.83□□□□□ -2.12
CD47-203ENST00000398258 IRX3P78415 501 aaPredicted RBP1.83□□□□□ -2.12
CD47-203ENST00000398258 ARHGAP19Q14CB8 494 aa1.83□□□□□ -2.12
CD47-203ENST00000398258 ZNF630Q2M218 657 aaPredicted RBP1.83□□□□□ -2.12
CD47-203ENST00000398258 ARMC12Q5T9G4 340 aa1.83□□□□□ -2.12
CD47-203ENST00000398258 GPR157Q5UAW9 335 aa1.83□□□□□ -2.12
CD47-203ENST00000398258 RNASEKQ6P5S7 137 aaKnown RBP1.83□□□□□ -2.12
CD47-203ENST00000398258 TRIM40Q6P9F5 258 aa1.83□□□□□ -2.12
CD47-203ENST00000398258 Q6ZN92 141 aa1.83□□□□□ -2.12
CD47-203ENST00000398258 ACP7Q6ZNF0 438 aa1.83□□□□□ -2.12
CD47-203ENST00000398258 LRRC74BQ6ZQY2 392 aa1.83□□□□□ -2.12
CD47-203ENST00000398258 Q6ZSR3 168 aa1.83□□□□□ -2.12
CD47-203ENST00000398258 MFSD6LQ8IWD5 586 aa1.83□□□□□ -2.12
CD47-203ENST00000398258 ZNF557Q8N988 423 aaPredicted RBP1.83□□□□□ -2.12
CD47-203ENST00000398258 OR7G2Q8NG99 324 aa1.83□□□□□ -2.12
CD47-203ENST00000398258 OR4C5Q8NGB2 326 aa1.83□□□□□ -2.12
CD47-203ENST00000398258 OR9G1Q8NH87 305 aa1.83□□□□□ -2.12
CD47-203ENST00000398258 PLPPR1Q8TBJ4 325 aa1.83□□□□□ -2.12
CD47-203ENST00000398258 GPR151Q8TDV0 419 aa1.83□□□□□ -2.12
CD47-203ENST00000398258 PIBF1Q8WXW3 757 aa1.83□□□□□ -2.12
CD47-203ENST00000398258 ELSPBP1Q96BH3 223 aa1.83□□□□□ -2.12
CD47-203ENST00000398258 CYYR1Q96J86 154 aa1.83□□□□□ -2.12
CD47-203ENST00000398258 PELOQ9BRX2 385 aaKnown RBP1.83□□□□□ -2.12
CD47-203ENST00000398258 NXF3Q9H4D5 531 aaKnown RBP1.83□□□□□ -2.12
CD47-203ENST00000398258 RNF167Q9H6Y7 350 aa1.83□□□□□ -2.12
CD47-203ENST00000398258 KCNIP1Q9NZI2 227 aa1.83□□□□□ -2.12
CD47-203ENST00000398258 NYAP2Q9P242 653 aa1.83□□□□□ -2.12
CD47-203ENST00000398258 MTRF1LQ9UGC7 380 aaKnown RBP1.83□□□□□ -2.12
CD47-203ENST00000398258 TRAF3IP3Q9Y228 551 aa1.83□□□□□ -2.12
CD47-203ENST00000398258 STARD10Q9Y365 291 aa1.83□□□□□ -2.12
CD47-203ENST00000398258 HEATR9A2RTY3 570 aa1.82□□□□□ -2.12
CD47-203ENST00000398258 PEX7O00628 323 aa1.82□□□□□ -2.12
CD47-203ENST00000398258 MRPS12O15235 138 aaKnown RBP1.82□□□□□ -2.12
CD47-203ENST00000398258 SOX15O60248 233 aa1.82□□□□□ -2.12
CD47-203ENST00000398258 MGRN1O60291 552 aa1.82□□□□□ -2.12
CD47-203ENST00000398258 AGTP01019 485 aa1.82□□□□□ -2.12
CD47-203ENST00000398258 KRT14P02533 472 aa1.82□□□□□ -2.12
CD47-203ENST00000398258 IGHV4-34P06331 123 aa1.82□□□□□ -2.12
CD47-203ENST00000398258 CD1EP15812 388 aa1.82□□□□□ -2.12
CD47-203ENST00000398258 ZNF17P17021 662 aa1.82□□□□□ -2.12
CD47-203ENST00000398258 FMO3P31513 532 aa1.82□□□□□ -2.12
CD47-203ENST00000398258 IFNA8P32881 189 aa1.82□□□□□ -2.12
CD47-203ENST00000398258 BTCP35070 178 aa1.82□□□□□ -2.12
CD47-203ENST00000398258 TNNT2P45379 298 aaPredicted RBP1.82□□□□□ -2.12
CD47-203ENST00000398258 GPR6P46095 362 aaPredicted RBP1.82□□□□□ -2.12
CD47-203ENST00000398258 UGT2B15P54855 530 aa1.82□□□□□ -2.12
CD47-203ENST00000398258 CCNA1P78396 465 aa1.82□□□□□ -2.12
CD47-203ENST00000398258 MRPS22P82650 360 aaKnown RBP1.82□□□□□ -2.12
CD47-203ENST00000398258 ACVR1Q04771 509 aa1.82□□□□□ -2.12
CD47-203ENST00000398258 ENPEPQ07075 957 aa1.82□□□□□ -2.12
CD47-203ENST00000398258 SRSF5Q13243 272 aaKnown RBP1.82□□□□□ -2.12
CD47-203ENST00000398258 KIAA0087Q14695 138 aa1.82□□□□□ -2.12
CD47-203ENST00000398258 XKR7Q5GH72 579 aa1.82□□□□□ -2.12
CD47-203ENST00000398258 LRRC66Q68CR7 880 aa1.82□□□□□ -2.12
CD47-203ENST00000398258 CERS6Q6ZMG9 384 aa1.82□□□□□ -2.12
CD47-203ENST00000398258 PEX26Q7Z412 305 aa1.82□□□□□ -2.12
CD47-203ENST00000398258 LHFPL3Q86UP9 236 aa1.82□□□□□ -2.12
CD47-203ENST00000398258 GTPBP8Q8N3Z3 284 aaPredicted RBP1.82□□□□□ -2.12
CD47-203ENST00000398258 ZADH2Q8N4Q0 377 aa1.82□□□□□ -2.12
CD47-203ENST00000398258 CEP112Q8N8E3 955 aa1.82□□□□□ -2.12
CD47-203ENST00000398258 ACOT4Q8N9L9 421 aa1.82□□□□□ -2.12
CD47-203ENST00000398258 DCAF4L2Q8NA75 395 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms