RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 SLC35B4Q969S0 331 aa7.55□□□□□ -1.2
CAPN3-208ENST00000397204 SLC25A36Q96CQ1 311 aa7.55□□□□□ -1.2
CAPN3-208ENST00000397204 LRR1Q96L50 414 aa7.55□□□□□ -1.2
CAPN3-208ENST00000397204 TEX37Q96LM6 180 aa7.55□□□□□ -1.2
CAPN3-208ENST00000397204 ALKBH3Q96Q83 286 aaPredicted RBP7.55□□□□□ -1.2
CAPN3-208ENST00000397204 SPATA9Q9BWV2 254 aa7.55□□□□□ -1.2
CAPN3-208ENST00000397204 NELFAQ9H3P2 528 aa7.55□□□□□ -1.2
CAPN3-208ENST00000397204 SEC61A2Q9H9S3 476 aa7.55□□□□□ -1.2
CAPN3-208ENST00000397204 GPR35Q9HC97 309 aa7.55□□□□□ -1.2
CAPN3-208ENST00000397204 THUMPD1Q9NXG2 353 aaKnown RBP7.55□□□□□ -1.2
CAPN3-208ENST00000397204 P2RX2Q9UBL9 471 aa7.55□□□□□ -1.2
CAPN3-208ENST00000397204 REV1Q9UBZ9 1251 aa7.55□□□□□ -1.2
CAPN3-208ENST00000397204 HAO1Q9UJM8 370 aa7.55□□□□□ -1.2
CAPN3-208ENST00000397204 USP22Q9UPT9 525 aa7.55□□□□□ -1.2
CAPN3-208ENST00000397204 IFT52Q9Y366 437 aa7.55□□□□□ -1.2
CAPN3-208ENST00000397204 WDR91A4D1P6 747 aa7.54□□□□□ -1.2
CAPN3-208ENST00000397204 ZNF99A8MXY4 864 aaPredicted RBP7.54□□□□□ -1.2
CAPN3-208ENST00000397204 LYNX1G3V0Z9 82 aa7.54□□□□□ -1.2
CAPN3-208ENST00000397204 RFXANKO14593 260 aa7.54□□□□□ -1.2
CAPN3-208ENST00000397204 FZD7O75084 574 aa7.54□□□□□ -1.2
CAPN3-208ENST00000397204 VENTXO95231 258 aa7.54□□□□□ -1.2
CAPN3-208ENST00000397204 GSNP06396 782 aa7.54□□□□□ -1.2
CAPN3-208ENST00000397204 CELA3BP08861 270 aa7.54□□□□□ -1.2
CAPN3-208ENST00000397204 LYNX1P0DP58 116 aa7.54□□□□□ -1.2
CAPN3-208ENST00000397204 PNMTP11086 282 aa7.54□□□□□ -1.2
CAPN3-208ENST00000397204 PRG2P13727 222 aa7.54□□□□□ -1.2
CAPN3-208ENST00000397204 GLRXP35754 106 aa7.54□□□□□ -1.2
CAPN3-208ENST00000397204 SLC1A6P48664 564 aa7.54□□□□□ -1.2
CAPN3-208ENST00000397204 CRISP3P54108 245 aa7.54□□□□□ -1.2
CAPN3-208ENST00000397204 EGR4Q05215 589 aa7.54□□□□□ -1.2
CAPN3-208ENST00000397204 TRIP10Q15642 601 aa7.54□□□□□ -1.2
CAPN3-208ENST00000397204 CHI3L2Q15782 390 aa7.54□□□□□ -1.2
CAPN3-208ENST00000397204 REP15Q6BDI9 236 aa7.54□□□□□ -1.2
CAPN3-208ENST00000397204 C5orf46Q6UWT4 87 aa7.54□□□□□ -1.2
CAPN3-208ENST00000397204 ZNF836Q6ZNA1 936 aa7.54□□□□□ -1.2
CAPN3-208ENST00000397204 USP43Q70EL4 1123 aa7.54□□□□□ -1.2
CAPN3-208ENST00000397204 H1FNTQ75WM6 255 aaPredicted RBP7.54□□□□□ -1.2
CAPN3-208ENST00000397204 ZNF627Q7L945 461 aa7.54□□□□□ -1.2
CAPN3-208ENST00000397204 MDP1Q86V88 176 aa7.54□□□□□ -1.2
CAPN3-208ENST00000397204 KDM8Q8N371 416 aa7.54□□□□□ -1.2
CAPN3-208ENST00000397204 TEX29Q8N6K0 151 aa7.54□□□□□ -1.2
CAPN3-208ENST00000397204 GLB1L3Q8NCI6 653 aaPredicted RBP7.54□□□□□ -1.2
CAPN3-208ENST00000397204 SGMS2Q8NHU3 365 aa7.54□□□□□ -1.2
CAPN3-208ENST00000397204 SLC38A5Q8WUX1 472 aa7.54□□□□□ -1.2
CAPN3-208ENST00000397204 RDH5Q92781 318 aa7.54□□□□□ -1.2
CAPN3-208ENST00000397204 ZMYND19Q96E35 227 aaPredicted RBP7.54□□□□□ -1.2
CAPN3-208ENST00000397204 ZBTB18Q99592 522 aa7.54□□□□□ -1.2
CAPN3-208ENST00000397204 TMEM109Q9BVC6 243 aa7.54□□□□□ -1.2
CAPN3-208ENST00000397204 NUF2Q9BZD4 464 aa7.54□□□□□ -1.2
CAPN3-208ENST00000397204 C20orf27Q9GZN8 174 aa7.54□□□□□ -1.2
CAPN3-208ENST00000397204 RACGAP1Q9H0H5 632 aa7.54□□□□□ -1.2
CAPN3-208ENST00000397204 DENND2DQ9H6A0 471 aaPredicted RBP7.54□□□□□ -1.2
CAPN3-208ENST00000397204 C7orf69Q9H7B7 122 aa7.54□□□□□ -1.2
CAPN3-208ENST00000397204 MEAF6Q9HAF1 191 aa7.54□□□□□ -1.2
CAPN3-208ENST00000397204 C12orf10Q9HB07 376 aa7.54□□□□□ -1.2
CAPN3-208ENST00000397204 CACYBPQ9HB71 228 aaKnown RBP7.54□□□□□ -1.2
CAPN3-208ENST00000397204 CRLF2Q9HC73 371 aa7.54□□□□□ -1.2
CAPN3-208ENST00000397204 AIG1Q9NVV5 245 aa7.54□□□□□ -1.2
CAPN3-208ENST00000397204 HIF1ANQ9NWT6 349 aa7.54□□□□□ -1.2
CAPN3-208ENST00000397204 B3GNT2Q9NY97 397 aa7.54□□□□□ -1.2
CAPN3-208ENST00000397204 ZNF443Q9Y2A4 671 aaPredicted RBP7.54□□□□□ -1.2
CAPN3-208ENST00000397204 DSPPQ9NZW4 1301 aa7.53□□□□□ -1.2
CAPN3-208ENST00000397204 TMEM89A2RUT3 159 aa7.53□□□□□ -1.2
CAPN3-208ENST00000397204 TMEM247A6NEH6 219 aa7.53□□□□□ -1.2
CAPN3-208ENST00000397204 M0R233 179 aa7.53□□□□□ -1.2
CAPN3-208ENST00000397204 AIM2O14862 343 aa7.53□□□□□ -1.2
CAPN3-208ENST00000397204 AKAP8O43823 692 aaKnown RBP7.53□□□□□ -1.2
CAPN3-208ENST00000397204 IGLV1-40P01703 118 aa7.53□□□□□ -1.2
CAPN3-208ENST00000397204 TFP02787 698 aa7.53□□□□□ -1.2
CAPN3-208ENST00000397204 IL6P05231 212 aa7.53□□□□□ -1.2
CAPN3-208ENST00000397204 ZCCHC18P0CG32 403 aa7.53□□□□□ -1.2
CAPN3-208ENST00000397204 ZNF35P13682 527 aa7.53□□□□□ -1.2
CAPN3-208ENST00000397204 ANPEPP15144 967 aa7.53□□□□□ -1.2
CAPN3-208ENST00000397204 ACHEP22303 614 aa7.53□□□□□ -1.2
CAPN3-208ENST00000397204 GTF2E2P29084 291 aaKnown RBP7.53□□□□□ -1.2
CAPN3-208ENST00000397204 IL12AP29459 219 aa7.53□□□□□ -1.2
CAPN3-208ENST00000397204 CDKN2CP42773 168 aa7.53□□□□□ -1.2
CAPN3-208ENST00000397204 CRATP43155 626 aa7.53□□□□□ -1.2
CAPN3-208ENST00000397204 GPR6P46095 362 aaPredicted RBP7.53□□□□□ -1.2
CAPN3-208ENST00000397204 RPS5P46782 204 aaKnown RBP7.53□□□□□ -1.2
CAPN3-208ENST00000397204 CAPZA2P47755 286 aa7.53□□□□□ -1.2
CAPN3-208ENST00000397204 MVDP53602 400 aa7.53□□□□□ -1.2
CAPN3-208ENST00000397204 DSTNP60981 165 aa7.53□□□□□ -1.2
CAPN3-208ENST00000397204 MRPS11P82912 194 aaKnown RBP7.53□□□□□ -1.2
CAPN3-208ENST00000397204 IL1RL1Q01638 556 aa7.53□□□□□ -1.2
CAPN3-208ENST00000397204 NPRL3Q12980 569 aa7.53□□□□□ -1.2
CAPN3-208ENST00000397204 SNTB2Q13425 540 aaKnown RBP7.53□□□□□ -1.2
CAPN3-208ENST00000397204 CEACAM16Q2WEN9 425 aa7.53□□□□□ -1.2
CAPN3-208ENST00000397204 TRMT5Q32P41 509 aaKnown RBP7.53□□□□□ -1.2
CAPN3-208ENST00000397204 PDCD4Q53EL6 469 aaKnown RBP7.53□□□□□ -1.2
CAPN3-208ENST00000397204 ELFN2Q5R3F8 820 aa7.53□□□□□ -1.2
CAPN3-208ENST00000397204 FAM69AQ5T7M9 428 aa7.53□□□□□ -1.2
CAPN3-208ENST00000397204 ATG16L1Q676U5 607 aa7.53□□□□□ -1.2
CAPN3-208ENST00000397204 RINLQ6ZS11 566 aa7.53□□□□□ -1.2
CAPN3-208ENST00000397204 MYPOPQ86VE0 399 aaPredicted RBP7.53□□□□□ -1.2
CAPN3-208ENST00000397204 SNX32Q86XE0 403 aa7.53□□□□□ -1.2
CAPN3-208ENST00000397204 CDK20Q8IZL9 346 aa7.53□□□□□ -1.2
CAPN3-208ENST00000397204 C3orf56Q8N813 242 aa7.53□□□□□ -1.2
CAPN3-208ENST00000397204 PNPT1Q8TCS8 783 aaKnown RBP7.53□□□□□ -1.2
CAPN3-208ENST00000397204 FAM216AQ8WUB2 273 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 190.4 ms