RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 MRPL10Q7Z7H8 261 aaKnown RBP12.98□□□□□ -0.33
COL4A3-202ENST00000396578 FAM185AQ8N0U4 392 aa12.98□□□□□ -0.33
COL4A3-202ENST00000396578 DHRS4Q9BTZ2 278 aa12.98□□□□□ -0.33
COL4A3-202ENST00000396578 ACSS1Q9NUB1 689 aaPredicted RBP12.98□□□□□ -0.33
COL4A3-202ENST00000396578 SSUH2Q9Y2M2 353 aa12.98□□□□□ -0.33
COL4A3-202ENST00000396578 A0A0A6YYC8 382 aaPredicted RBP12.98□□□□□ -0.33
COL4A3-202ENST00000396578 PRAMEF26H0Y7S4 382 aa12.98□□□□□ -0.33
COL4A3-202ENST00000396578 I3L1I5 382 aaPredicted RBP12.98□□□□□ -0.33
COL4A3-202ENST00000396578 I6L893 689 aaPredicted RBP12.98□□□□□ -0.33
COL4A3-202ENST00000396578 ZFAND5O76080 213 aa12.98□□□□□ -0.33
COL4A3-202ENST00000396578 OR8G3PP0DMU2 310 aa12.98□□□□□ -0.33
COL4A3-202ENST00000396578 OR13C7P0DN81 318 aa12.98□□□□□ -0.33
COL4A3-202ENST00000396578 BAK1Q16611 211 aa12.98□□□□□ -0.33
COL4A3-202ENST00000396578 CELF2-AS1Q8N7Q2 184 aa12.98□□□□□ -0.33
COL4A3-202ENST00000396578 OR52E1Q8NGJ3 308 aa12.98□□□□□ -0.33
COL4A3-202ENST00000396578 TMEM106AQ96A25 262 aa12.98□□□□□ -0.33
COL4A3-202ENST00000396578 MUCL1Q96DR8 90 aa12.98□□□□□ -0.33
COL4A3-202ENST00000396578 PLK3Q9H4B4 646 aa12.98□□□□□ -0.33
COL4A3-202ENST00000396578 A6NL46 340 aa12.98□□□□□ -0.33
COL4A3-202ENST00000396578 CSO75390 466 aaKnown RBP12.98□□□□□ -0.33
COL4A3-202ENST00000396578 CCR6P51684 374 aa12.98□□□□□ -0.33
COL4A3-202ENST00000396578 BTNL8Q6UX41 500 aa12.98□□□□□ -0.33
COL4A3-202ENST00000396578 KLHDC8BQ8IXV7 354 aa12.98□□□□□ -0.33
COL4A3-202ENST00000396578 PCNPQ8WW12 178 aaKnown RBP12.98□□□□□ -0.33
COL4A3-202ENST00000396578 ISG20Q96AZ6 181 aaKnown RBP12.98□□□□□ -0.33
COL4A3-202ENST00000396578 NUDT22Q9BRQ3 303 aa12.98□□□□□ -0.33
COL4A3-202ENST00000396578 C16orf70Q9BSU1 422 aa12.98□□□□□ -0.33
COL4A3-202ENST00000396578 TXNRD2Q9NNW7 524 aa12.98□□□□□ -0.33
COL4A3-202ENST00000396578 MTCH1Q9NZJ7 389 aa12.98□□□□□ -0.33
COL4A3-202ENST00000396578 XRCC3O43542 346 aa12.97□□□□□ -0.33
COL4A3-202ENST00000396578 MRPL33O75394 65 aaKnown RBP12.97□□□□□ -0.33
COL4A3-202ENST00000396578 NXPH3O95157 252 aa12.97□□□□□ -0.33
COL4A3-202ENST00000396578 HTR1FP30939 366 aa12.97□□□□□ -0.33
COL4A3-202ENST00000396578 SLC14A2Q15849 920 aa12.97□□□□□ -0.33
COL4A3-202ENST00000396578 SLC5A12Q1EHB4 618 aa12.97□□□□□ -0.33
COL4A3-202ENST00000396578 WWTR1Q9GZV5 400 aa12.97□□□□□ -0.33
COL4A3-202ENST00000396578 SLAMF7Q9NQ25 335 aa12.97□□□□□ -0.33
COL4A3-202ENST00000396578 LAMB4A4D0S4 1761 aa12.97□□□□□ -0.33
COL4A3-202ENST00000396578 AQP9O43315 295 aa12.97□□□□□ -0.33
COL4A3-202ENST00000396578 DAPP51397 102 aa12.97□□□□□ -0.33
COL4A3-202ENST00000396578 ILKQ13418 452 aa12.97□□□□□ -0.33
COL4A3-202ENST00000396578 KIAA0141Q14154 515 aaPredicted RBP12.97□□□□□ -0.33
COL4A3-202ENST00000396578 NR0B2Q15466 257 aa12.97□□□□□ -0.33
COL4A3-202ENST00000396578 Q499Y3 187 aa12.97□□□□□ -0.33
COL4A3-202ENST00000396578 CD276Q5ZPR3 534 aa12.97□□□□□ -0.33
COL4A3-202ENST00000396578 GPR26Q8NDV2 337 aa12.97□□□□□ -0.33
COL4A3-202ENST00000396578 OR52I1Q8NGK6 324 aa12.97□□□□□ -0.33
COL4A3-202ENST00000396578 OR10R2Q8NGX6 335 aa12.97□□□□□ -0.33
COL4A3-202ENST00000396578 KIR2DS5A0A0G2JLQ3 304 aa12.97□□□□□ -0.33
COL4A3-202ENST00000396578 A0A0G2JNG1 304 aa12.97□□□□□ -0.33
COL4A3-202ENST00000396578 NUDT19A8MXV4 375 aa12.97□□□□□ -0.33
COL4A3-202ENST00000396578 KIR2DS3K7RE56 304 aa12.97□□□□□ -0.33
COL4A3-202ENST00000396578 HSD17B6O14756 317 aa12.97□□□□□ -0.33
COL4A3-202ENST00000396578 GSTP1P09211 210 aaKnown RBP12.97□□□□□ -0.33
COL4A3-202ENST00000396578 SPI1P17947 270 aa12.97□□□□□ -0.33
COL4A3-202ENST00000396578 KIR2DS5Q14953 304 aa12.97□□□□□ -0.33
COL4A3-202ENST00000396578 SLC36A2Q495M3 483 aa12.97□□□□□ -0.33
COL4A3-202ENST00000396578 H3F3CQ6NXT2 135 aa12.97□□□□□ -0.33
COL4A3-202ENST00000396578 ADGRE4PQ86SQ3 457 aa12.97□□□□□ -0.33
COL4A3-202ENST00000396578 C3orf30Q96M34 536 aa12.97□□□□□ -0.33
COL4A3-202ENST00000396578 RAB22AQ9UL26 194 aa12.97□□□□□ -0.33
COL4A3-202ENST00000396578 UNCXA6NJT0 531 aa12.97□□□□□ -0.33
COL4A3-202ENST00000396578 SLC16A6O15403 523 aa12.97□□□□□ -0.33
COL4A3-202ENST00000396578 SLC5A2P31639 672 aa12.97□□□□□ -0.33
COL4A3-202ENST00000396578 ZNF140P52738 457 aaPredicted RBP12.97□□□□□ -0.33
COL4A3-202ENST00000396578 NXNL2Q5VZ03 156 aa12.97□□□□□ -0.33
COL4A3-202ENST00000396578 DPPA4Q7L190 304 aa12.97□□□□□ -0.33
COL4A3-202ENST00000396578 ZNRF4Q8WWF5 429 aa12.97□□□□□ -0.33
COL4A3-202ENST00000396578 SUCNR1Q9BXA5 334 aa12.97□□□□□ -0.33
COL4A3-202ENST00000396578 SLC35D1Q9NTN3 355 aa12.97□□□□□ -0.33
COL4A3-202ENST00000396578 OTOFQ9HC10 1997 aa12.97□□□□□ -0.33
COL4A3-202ENST00000396578 VASPP50552 380 aaPredicted RBP12.97□□□□□ -0.33
COL4A3-202ENST00000396578 OR1J2Q8NGS2 313 aa12.97□□□□□ -0.33
COL4A3-202ENST00000396578 C11orf54Q9H0W9 315 aaPredicted RBP12.97□□□□□ -0.33
COL4A3-202ENST00000396578 OR52A4PA6NMU1 304 aa12.97□□□□□ -0.33
COL4A3-202ENST00000396578 SNAI1O95863 264 aaPredicted RBP12.97□□□□□ -0.33
COL4A3-202ENST00000396578 ZNF93P35789 620 aaPredicted RBP12.97□□□□□ -0.33
COL4A3-202ENST00000396578 SLC7A9P82251 487 aa12.97□□□□□ -0.33
COL4A3-202ENST00000396578 C15orf39Q6ZRI6 1047 aa12.97□□□□□ -0.33
COL4A3-202ENST00000396578 SLC35D2Q76EJ3 337 aa12.97□□□□□ -0.33
COL4A3-202ENST00000396578 OR13C9Q8NGT0 318 aa12.97□□□□□ -0.33
COL4A3-202ENST00000396578 ZNF251Q9BRH9 671 aa12.97□□□□□ -0.33
COL4A3-202ENST00000396578 TMPRSS5Q9H3S3 457 aa12.97□□□□□ -0.33
COL4A3-202ENST00000396578 OR52A1Q9UKL2 312 aa12.97□□□□□ -0.33
COL4A3-202ENST00000396578 RGPD5Q99666 1765 aa12.97□□□□□ -0.33
COL4A3-202ENST00000396578 GALR3O60755 368 aaPredicted RBP12.96□□□□□ -0.33
COL4A3-202ENST00000396578 SBK2P0C263 348 aa12.96□□□□□ -0.33
COL4A3-202ENST00000396578 DTYMKP23919 212 aa12.96□□□□□ -0.33
COL4A3-202ENST00000396578 PAX6P26367 422 aa12.96□□□□□ -0.33
COL4A3-202ENST00000396578 C5orf46Q6UWT4 87 aa12.96□□□□□ -0.33
COL4A3-202ENST00000396578 ESPNLQ6ZVH7 1005 aa12.96□□□□□ -0.33
COL4A3-202ENST00000396578 OR2G3Q8NGZ4 309 aa12.96□□□□□ -0.33
COL4A3-202ENST00000396578 NGBQ9NPG2 151 aa12.96□□□□□ -0.33
COL4A3-202ENST00000396578 NALCNQ8IZF0 1738 aa12.96□□□□□ -0.33
COL4A3-202ENST00000396578 GRB2P62993 217 aaKnown RBP12.96□□□□□ -0.33
COL4A3-202ENST00000396578 SPRED3Q2MJR0 410 aa12.96□□□□□ -0.33
COL4A3-202ENST00000396578 DPF1Q92782 380 aa12.96□□□□□ -0.33
COL4A3-202ENST00000396578 V9GYS6 101 aa12.96□□□□□ -0.33
COL4A3-202ENST00000396578 ADRB1P08588 477 aa12.96□□□□□ -0.33
COL4A3-202ENST00000396578 MAMDC4Q6UXC1 1216 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms