RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 F5H0A9 414 aaPredicted RBP9□□□□□ -0.97
TRIM39-203ENST00000396547 H7C1C5 153 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 CTDSPLO15194 276 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 PAK4O96013 591 aaPredicted RBP9□□□□□ -0.97
TRIM39-203ENST00000396547 SLC6A6P31641 620 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 FAUP35544 74 aaKnown RBP9□□□□□ -0.97
TRIM39-203ENST00000396547 LCN6P62502 163 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 RBMS2Q15434 407 aaKnown RBP9□□□□□ -0.97
TRIM39-203ENST00000396547 ELFN2Q5R3F8 820 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 STAC2Q6ZMT1 411 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 Q7L0L9 218 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 ZNF627Q7L945 461 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 RD3Q7Z3Z2 195 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 C12orf40Q86WS4 652 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 NRROSQ86YC3 692 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 LRRC25Q8N386 305 aaPredicted RBP9□□□□□ -0.97
TRIM39-203ENST00000396547 NKD1Q969G9 470 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 PCBD2Q9H0N5 130 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 TMEM74BQ9NUR3 256 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 KLF15Q9UIH9 416 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 CES1P1Q9UKY3 287 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 ZNF281Q9Y2X9 895 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 A0A1B0GW55 424 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 A0A1B0GWA3 101 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 SNRPGP15A8MWD9 76 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 SIGLEC6O43699 453 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 PRKNO60260 465 aaPredicted RBP9□□□□□ -0.97
TRIM39-203ENST00000396547 OR2T7P0C7T2 308 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 DUX4L2P0CJ85 424 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 DUX4L3P0CJ86 424 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 DUX4L4P0CJ87 422 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 DUX4L5P0CJ88 424 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 DUX4L6P0CJ89 424 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 DUX4L7P0CJ90 424 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 CD53P19397 219 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 EPHA4P54764 986 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 OR7A5Q15622 319 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 MLF2Q15773 248 aaPredicted RBP9□□□□□ -0.97
TRIM39-203ENST00000396547 EIPR1Q53HC9 387 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 ALG10BQ5I7T1 473 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 DCST2Q5T1A1 773 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 TMEM17Q86X19 198 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 ZNF676Q8N7Q3 588 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 KREMEN2Q8NCW0 462 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 OR1S2Q8NGQ3 325 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 OR2T27Q8NH04 317 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 PAQR8Q8TEZ7 354 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 LCORQ96JN0 433 aaPredicted RBP9□□□□□ -0.97
TRIM39-203ENST00000396547 JAM3Q9BX67 310 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 TREM1Q9NP99 234 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 PRSS16Q9NQE7 514 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 DUX4Q9UBX2 424 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 GPR34Q9UPC5 381 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 NOP16Q9Y3C1 178 aaKnown RBP9□□□□□ -0.97
TRIM39-203ENST00000396547 TRPM6Q9BX84 2022 aa8.99□□□□□ -0.97
TRIM39-203ENST00000396547 DOCK9Q9BZ29 2069 aa8.99□□□□□ -0.97
TRIM39-203ENST00000396547 ARPC4-TTLL3A0A0A6YYG9 625 aa8.99□□□□□ -0.97
TRIM39-203ENST00000396547 PRR32B1ATL7 298 aa8.99□□□□□ -0.97
TRIM39-203ENST00000396547 F8W036 122 aa8.99□□□□□ -0.97
TRIM39-203ENST00000396547 CXCL14O95715 111 aa8.99□□□□□ -0.97
TRIM39-203ENST00000396547 NGFRP08138 427 aa8.99□□□□□ -0.97
TRIM39-203ENST00000396547 CPMP14384 443 aa8.99□□□□□ -0.97
TRIM39-203ENST00000396547 ADRA2CP18825 462 aa8.99□□□□□ -0.97
TRIM39-203ENST00000396547 MAOBP27338 520 aa8.99□□□□□ -0.97
TRIM39-203ENST00000396547 ACTA2P62736 377 aa8.99□□□□□ -0.97
TRIM39-203ENST00000396547 TRA2BP62995 288 aaKnown RBP8.99□□□□□ -0.97
TRIM39-203ENST00000396547 ACTG2P63267 376 aa8.99□□□□□ -0.97
TRIM39-203ENST00000396547 EEF1A1P68104 462 aaKnown RBP8.99□□□□□ -0.97
TRIM39-203ENST00000396547 BLOC1S1P78537 153 aa8.99□□□□□ -0.97
TRIM39-203ENST00000396547 ZNF234Q14588 700 aa8.99□□□□□ -0.97
TRIM39-203ENST00000396547 MANEAQ5SRI9 462 aa8.99□□□□□ -0.97
TRIM39-203ENST00000396547 METRNLQ641Q3 311 aa8.99□□□□□ -0.97
TRIM39-203ENST00000396547 NUDT18Q6ZVK8 323 aa8.99□□□□□ -0.97
TRIM39-203ENST00000396547 SPRED2Q7Z698 418 aa8.99□□□□□ -0.97
TRIM39-203ENST00000396547 KRT77Q7Z794 578 aa8.99□□□□□ -0.97
TRIM39-203ENST00000396547 ZNF761Q86XN6 746 aaPredicted RBP8.99□□□□□ -0.97
TRIM39-203ENST00000396547 PUSL1Q8N0Z8 303 aaKnown RBP8.99□□□□□ -0.97
TRIM39-203ENST00000396547 TEX19Q8NA77 164 aa8.99□□□□□ -0.97
TRIM39-203ENST00000396547 STEAP2Q8NFT2 490 aa8.99□□□□□ -0.97
TRIM39-203ENST00000396547 CASTOR1Q8WTX7 329 aa8.99□□□□□ -0.97
TRIM39-203ENST00000396547 C3orf49Q96BT1 292 aa8.99□□□□□ -0.97
TRIM39-203ENST00000396547 ZNF681Q96N22 645 aa8.99□□□□□ -0.97
TRIM39-203ENST00000396547 MS4A4EQ96PG1 132 aa8.99□□□□□ -0.97
TRIM39-203ENST00000396547 VRK1Q99986 396 aaPredicted RBP8.99□□□□□ -0.97
TRIM39-203ENST00000396547 ESRP2Q9H6T0 727 aaKnown RBP8.99□□□□□ -0.97
TRIM39-203ENST00000396547 SLC22A11Q9NSA0 550 aa8.99□□□□□ -0.97
TRIM39-203ENST00000396547 COMMD9Q9P000 198 aa8.99□□□□□ -0.97
TRIM39-203ENST00000396547 TRAV8-7A0A075B6U6 113 aa8.99□□□□□ -0.97
TRIM39-203ENST00000396547 OR6C68A6NDL8 312 aa8.99□□□□□ -0.97
TRIM39-203ENST00000396547 TMEM200CA6NKL6 621 aa8.99□□□□□ -0.97
TRIM39-203ENST00000396547 OR2AT4A6NND4 320 aa8.99□□□□□ -0.97
TRIM39-203ENST00000396547 HMSDA8MTL9 139 aa8.99□□□□□ -0.97
TRIM39-203ENST00000396547 FADS1O60427 444 aa8.99□□□□□ -0.97
TRIM39-203ENST00000396547 SNRNP200O75643 2136 aaKnown RBP8.99□□□□□ -0.97
TRIM39-203ENST00000396547 GPANK1O95872 356 aa8.99□□□□□ -0.97
TRIM39-203ENST00000396547 PRNPP04156 253 aa8.99□□□□□ -0.97
TRIM39-203ENST00000396547 IL5P05113 134 aa8.99□□□□□ -0.97
TRIM39-203ENST00000396547 ZNF806P0C7X5 589 aa8.99□□□□□ -0.97
TRIM39-203ENST00000396547 SLC2A5P22732 501 aa8.99□□□□□ -0.97
TRIM39-203ENST00000396547 DDX6P26196 483 aaKnown RBP eCLIP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms