RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 NTMQ9P121 344 aa12.13□□□□□ -0.47
NFKB1-202ENST00000394820 ERVK-19Q9WJR5 959 aa12.13□□□□□ -0.47
NFKB1-202ENST00000394820 ASB4Q9Y574 426 aa12.13□□□□□ -0.47
NFKB1-202ENST00000394820 VPS13AQ96RL7 3174 aa12.13□□□□□ -0.47
NFKB1-202ENST00000394820 DLX5P56178 289 aa12.13□□□□□ -0.47
NFKB1-202ENST00000394820 CHAF1BQ13112 559 aa12.13□□□□□ -0.47
NFKB1-202ENST00000394820 FAM122CQ6P4D5 195 aa12.13□□□□□ -0.47
NFKB1-202ENST00000394820 ARHGAP11AQ6P4F7 1023 aa12.13□□□□□ -0.47
NFKB1-202ENST00000394820 TMUB2Q71RG4 321 aa12.13□□□□□ -0.47
NFKB1-202ENST00000394820 PRSS42Q7Z5A4 293 aa12.13□□□□□ -0.47
NFKB1-202ENST00000394820 ZNF619Q8N2I2 560 aa12.13□□□□□ -0.47
NFKB1-202ENST00000394820 PPP1R14AQ96A00 147 aa12.13□□□□□ -0.47
NFKB1-202ENST00000394820 RSPO3Q9BXY4 272 aaPredicted RBP12.13□□□□□ -0.47
NFKB1-202ENST00000394820 TANC1Q9C0D5 1861 aa12.13□□□□□ -0.47
NFKB1-202ENST00000394820 TDRD6O60522 2096 aaKnown RBP12.13□□□□□ -0.47
NFKB1-202ENST00000394820 A0A0B4J2A0 478 aa12.13□□□□□ -0.47
NFKB1-202ENST00000394820 FGF17O60258 216 aa12.13□□□□□ -0.47
NFKB1-202ENST00000394820 ADH1BP00325 375 aa12.13□□□□□ -0.47
NFKB1-202ENST00000394820 LPLP06858 475 aa12.13□□□□□ -0.47
NFKB1-202ENST00000394820 TPMTP51580 245 aa12.13□□□□□ -0.47
NFKB1-202ENST00000394820 BTG1P62324 171 aa12.13□□□□□ -0.47
NFKB1-202ENST00000394820 SNRPNP63162 240 aaKnown RBP12.13□□□□□ -0.47
NFKB1-202ENST00000394820 ACTC1P68032 377 aa12.13□□□□□ -0.47
NFKB1-202ENST00000394820 ACTA1P68133 377 aa12.13□□□□□ -0.47
NFKB1-202ENST00000394820 ARHGAP19Q14CB8 494 aa12.13□□□□□ -0.47
NFKB1-202ENST00000394820 DECR1Q16698 335 aa12.13□□□□□ -0.47
NFKB1-202ENST00000394820 TIGD3Q6B0B8 471 aa12.13□□□□□ -0.47
NFKB1-202ENST00000394820 TSSK4Q6SA08 328 aa12.13□□□□□ -0.47
NFKB1-202ENST00000394820 PELI1Q96FA3 418 aa12.13□□□□□ -0.47
NFKB1-202ENST00000394820 ALG12Q9BV10 488 aa12.13□□□□□ -0.47
NFKB1-202ENST00000394820 IL20Q9NYY1 176 aa12.13□□□□□ -0.47
NFKB1-202ENST00000394820 SHPKQ9UHJ6 478 aa12.13□□□□□ -0.47
NFKB1-202ENST00000394820 SF3B6Q9Y3B4 125 aaKnown RBP12.13□□□□□ -0.47
NFKB1-202ENST00000394820 PRSS38A1L453 326 aa12.12□□□□□ -0.47
NFKB1-202ENST00000394820 M0R036 132 aa12.12□□□□□ -0.47
NFKB1-202ENST00000394820 FBXO24O75426 580 aa12.12□□□□□ -0.47
NFKB1-202ENST00000394820 HTR3BO95264 441 aa12.12□□□□□ -0.47
NFKB1-202ENST00000394820 CD3DP04234 171 aa12.12□□□□□ -0.47
NFKB1-202ENST00000394820 NTSR1P30989 418 aa12.12□□□□□ -0.47
NFKB1-202ENST00000394820 PCBP4P57723 403 aaKnown RBP12.12□□□□□ -0.47
NFKB1-202ENST00000394820 TEKQ02763 1124 aa12.12□□□□□ -0.47
NFKB1-202ENST00000394820 TMEM35AQ53FP2 167 aa12.12□□□□□ -0.47
NFKB1-202ENST00000394820 TMEM196Q5HYL7 178 aa12.12□□□□□ -0.47
NFKB1-202ENST00000394820 TMEM201Q5SNT2 666 aa12.12□□□□□ -0.47
NFKB1-202ENST00000394820 OR10R2Q8NGX6 335 aa12.12□□□□□ -0.47
NFKB1-202ENST00000394820 RBP7Q96R05 134 aa12.12□□□□□ -0.47
NFKB1-202ENST00000394820 Q9N2J8 555 aa12.12□□□□□ -0.47
NFKB1-202ENST00000394820 NRIP3Q9NQ35 241 aa12.12□□□□□ -0.47
NFKB1-202ENST00000394820 NCDNQ9UBB6 729 aa12.12□□□□□ -0.47
NFKB1-202ENST00000394820 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.12□□□□□ -0.47
NFKB1-202ENST00000394820 TNFSF12O43508 249 aa12.12□□□□□ -0.47
NFKB1-202ENST00000394820 APBB3O95704 486 aa12.12□□□□□ -0.47
NFKB1-202ENST00000394820 HLA-AP01891 365 aaKnown RBP12.12□□□□□ -0.47
NFKB1-202ENST00000394820 CXCR1P25024 350 aa12.12□□□□□ -0.47
NFKB1-202ENST00000394820 SWI5Q1ZZU3 235 aa12.12□□□□□ -0.47
NFKB1-202ENST00000394820 TMEM65Q6PI78 240 aa12.12□□□□□ -0.47
NFKB1-202ENST00000394820 TRILQ7L0X0 811 aa12.12□□□□□ -0.47
NFKB1-202ENST00000394820 CSNK1A1LQ8N752 337 aa12.12□□□□□ -0.47
NFKB1-202ENST00000394820 ADOQ96SZ5 270 aa12.12□□□□□ -0.47
NFKB1-202ENST00000394820 AICDAQ9GZX7 198 aa12.12□□□□□ -0.47
NFKB1-202ENST00000394820 GDE1Q9NZC3 331 aa12.12□□□□□ -0.47
NFKB1-202ENST00000394820 CAMK2AQ9UQM7 478 aa12.12□□□□□ -0.47
NFKB1-202ENST00000394820 SLC22A13Q9Y226 551 aa12.12□□□□□ -0.47
NFKB1-202ENST00000394820 REV3LO60673 3130 aa12.12□□□□□ -0.47
NFKB1-202ENST00000394820 KDM4EB2RXH2 506 aaPredicted RBP12.12□□□□□ -0.47
NFKB1-202ENST00000394820 F12P00748 615 aaPredicted RBP12.12□□□□□ -0.47
NFKB1-202ENST00000394820 LIMS1P48059 325 aa12.12□□□□□ -0.47
NFKB1-202ENST00000394820 ARRB1P49407 418 aaPredicted RBP12.12□□□□□ -0.47
NFKB1-202ENST00000394820 C21orf58P58505 322 aa12.12□□□□□ -0.47
NFKB1-202ENST00000394820 CAMK2DQ13557 499 aa12.12□□□□□ -0.47
NFKB1-202ENST00000394820 RBM39Q14498 530 aaKnown RBP12.12□□□□□ -0.47
NFKB1-202ENST00000394820 CAMKVQ8NCB2 501 aa12.12□□□□□ -0.47
NFKB1-202ENST00000394820 ARHGEF17Q96PE2 2063 aaPredicted RBP12.11□□□□□ -0.47
NFKB1-202ENST00000394820 ACOT7O00154 380 aa12.11□□□□□ -0.47
NFKB1-202ENST00000394820 RENP00797 406 aa12.11□□□□□ -0.47
NFKB1-202ENST00000394820 CD34P28906 385 aa12.11□□□□□ -0.47
NFKB1-202ENST00000394820 DLSTP36957 453 aa12.11□□□□□ -0.47
NFKB1-202ENST00000394820 TNFRSF17Q02223 184 aa12.11□□□□□ -0.47
NFKB1-202ENST00000394820 AIMP2Q13155 320 aaKnown RBP12.11□□□□□ -0.47
NFKB1-202ENST00000394820 ABHD13Q7L211 337 aa12.11□□□□□ -0.47
NFKB1-202ENST00000394820 MARCH3Q86UD3 253 aa12.11□□□□□ -0.47
NFKB1-202ENST00000394820 SPAG16Q8N0X2 631 aa12.11□□□□□ -0.47
NFKB1-202ENST00000394820 ZSCAN1Q8NBB4 408 aa12.11□□□□□ -0.47
NFKB1-202ENST00000394820 OR10AC1Q8NH08 325 aa12.11□□□□□ -0.47
NFKB1-202ENST00000394820 WASH6PQ9NQA3 447 aa12.11□□□□□ -0.47
NFKB1-202ENST00000394820 WBP1LQ9NX94 342 aa12.11□□□□□ -0.47
NFKB1-202ENST00000394820 COL9A1P20849 921 aa12.11□□□□□ -0.47
NFKB1-202ENST00000394820 ADPRHP54922 357 aa12.11□□□□□ -0.47
NFKB1-202ENST00000394820 SEC61A1P61619 476 aaKnown RBP12.11□□□□□ -0.47
NFKB1-202ENST00000394820 FUT5Q11128 374 aa12.11□□□□□ -0.47
NFKB1-202ENST00000394820 TNK1Q13470 666 aa12.11□□□□□ -0.47
NFKB1-202ENST00000394820 PLA1AQ53H76 456 aa12.11□□□□□ -0.47
NFKB1-202ENST00000394820 EXOSC6Q5RKV6 272 aaKnown RBP12.11□□□□□ -0.47
NFKB1-202ENST00000394820 MRM1Q6IN84 353 aaKnown RBP12.11□□□□□ -0.47
NFKB1-202ENST00000394820 WDR88Q6ZMY6 472 aa12.11□□□□□ -0.47
NFKB1-202ENST00000394820 STEAP2Q8NFT2 490 aa12.11□□□□□ -0.47
NFKB1-202ENST00000394820 OR4S1Q8NGB4 309 aa12.11□□□□□ -0.47
NFKB1-202ENST00000394820 DGAT2Q96PD7 388 aa12.11□□□□□ -0.47
NFKB1-202ENST00000394820 MED18Q9BUE0 208 aa12.11□□□□□ -0.47
NFKB1-202ENST00000394820 ZFP64Q9NPA5 681 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms