RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 ARFRP1Q13795 201 aa14.78□□□□□ -0.04
PCDH1-203ENST00000394536 KCTD18Q6PI47 426 aaPredicted RBP14.78□□□□□ -0.04
PCDH1-203ENST00000394536 DPY19L2P2Q6ZN68 376 aa14.78□□□□□ -0.04
PCDH1-203ENST00000394536 LRRC69Q6ZNQ3 347 aa14.78□□□□□ -0.04
PCDH1-203ENST00000394536 CFAP77Q6ZQR2 320 aa14.78□□□□□ -0.04
PCDH1-203ENST00000394536 MED25Q71SY5 747 aa14.78□□□□□ -0.04
PCDH1-203ENST00000394536 ZNF546Q86UE3 836 aa14.78□□□□□ -0.04
PCDH1-203ENST00000394536 ZNF584Q8IVC4 421 aa14.78□□□□□ -0.04
PCDH1-203ENST00000394536 SLC37A2Q8TED4 501 aa14.78□□□□□ -0.04
PCDH1-203ENST00000394536 RABL2BQ9UNT1 228 aa14.78□□□□□ -0.04
PCDH1-203ENST00000394536 METTL21EPA6NDL7 271 aa14.78□□□□□ -0.04
PCDH1-203ENST00000394536 AHSA1O95433 338 aa14.78□□□□□ -0.04
PCDH1-203ENST00000394536 OPN1LWP04000 364 aa14.78□□□□□ -0.04
PCDH1-203ENST00000394536 ADRB1P08588 477 aa14.78□□□□□ -0.04
PCDH1-203ENST00000394536 THEGLP0DJG4 465 aa14.78□□□□□ -0.04
PCDH1-203ENST00000394536 PEBP1P30086 187 aaKnown RBP14.78□□□□□ -0.04
PCDH1-203ENST00000394536 TAS2R20P59543 309 aa14.78□□□□□ -0.04
PCDH1-203ENST00000394536 ALKBH1Q13686 389 aaKnown RBP14.78□□□□□ -0.04
PCDH1-203ENST00000394536 TMEM205Q6UW68 189 aa14.78□□□□□ -0.04
PCDH1-203ENST00000394536 RELL2Q8NC24 303 aaPredicted RBP14.78□□□□□ -0.04
PCDH1-203ENST00000394536 TMEM41AQ96HV5 264 aa14.78□□□□□ -0.04
PCDH1-203ENST00000394536 OR2A5Q96R48 311 aa14.78□□□□□ -0.04
PCDH1-203ENST00000394536 SLC39A1Q9NY26 324 aa14.78□□□□□ -0.04
PCDH1-203ENST00000394536 MLXQ9UH92 298 aa14.78□□□□□ -0.04
PCDH1-203ENST00000394536 UNC13CQ8NB66 2214 aa14.78□□□□□ -0.04
PCDH1-203ENST00000394536 RHPN2P1A8MT19 583 aa14.77□□□□□ -0.04
PCDH1-203ENST00000394536 AIPO00170 330 aa14.77□□□□□ -0.04
PCDH1-203ENST00000394536 ZIC2O95409 532 aaPredicted RBP14.77□□□□□ -0.04
PCDH1-203ENST00000394536 GPANK1O95872 356 aa14.77□□□□□ -0.04
PCDH1-203ENST00000394536 CD14P08571 375 aa14.77□□□□□ -0.04
PCDH1-203ENST00000394536 SLC35E2P0CK97 266 aa14.77□□□□□ -0.04
PCDH1-203ENST00000394536 UBL4AP11441 157 aa14.77□□□□□ -0.04
PCDH1-203ENST00000394536 ST6GAL1P15907 406 aa14.77□□□□□ -0.04
PCDH1-203ENST00000394536 TACR3P29371 465 aa14.77□□□□□ -0.04
PCDH1-203ENST00000394536 POU3F4P49335 361 aa14.77□□□□□ -0.04
PCDH1-203ENST00000394536 PPP1CAP62136 330 aa14.77□□□□□ -0.04
PCDH1-203ENST00000394536 GUCA2AQ02747 115 aa14.77□□□□□ -0.04
PCDH1-203ENST00000394536 MEP1BQ16820 701 aa14.77□□□□□ -0.04
PCDH1-203ENST00000394536 NHLRC1Q6VVB1 395 aa14.77□□□□□ -0.04
PCDH1-203ENST00000394536 OVCH1Q7RTY7 1134 aa14.77□□□□□ -0.04
PCDH1-203ENST00000394536 NUP54Q7Z3B4 507 aa14.77□□□□□ -0.04
PCDH1-203ENST00000394536 KCTD20Q7Z5Y7 419 aa14.77□□□□□ -0.04
PCDH1-203ENST00000394536 TAS2R8Q9NYW2 309 aa14.77□□□□□ -0.04
PCDH1-203ENST00000394536 GSKIPQ9P0R6 139 aa14.77□□□□□ -0.04
PCDH1-203ENST00000394536 MKL2Q9ULH7 1088 aa14.77□□□□□ -0.04
PCDH1-203ENST00000394536 SLC17A4Q9Y2C5 497 aa14.77□□□□□ -0.04
PCDH1-203ENST00000394536 S100A11P31949 105 aa14.77□□□□□ -0.05
PCDH1-203ENST00000394536 C1orf189Q5VU69 101 aa14.77□□□□□ -0.05
PCDH1-203ENST00000394536 ZNF454Q8N9F8 522 aa14.77□□□□□ -0.05
PCDH1-203ENST00000394536 SPERTQ8NA61 448 aa14.77□□□□□ -0.05
PCDH1-203ENST00000394536 OR5M1Q8NGP8 315 aa14.77□□□□□ -0.05
PCDH1-203ENST00000394536 SLC2A12Q8TD20 617 aa14.77□□□□□ -0.05
PCDH1-203ENST00000394536 HHIPL1Q96JK4 782 aa14.77□□□□□ -0.05
PCDH1-203ENST00000394536 PRSS27Q9BQR3 290 aa14.77□□□□□ -0.05
PCDH1-203ENST00000394536 SDHAF2Q9NX18 166 aa14.77□□□□□ -0.05
PCDH1-203ENST00000394536 FLRT3Q9NZU0 649 aa14.77□□□□□ -0.05
PCDH1-203ENST00000394536 RBMS2Q15434 407 aaKnown RBP14.77□□□□□ -0.05
PCDH1-203ENST00000394536 RNASE10Q5GAN6 216 aaKnown RBP14.77□□□□□ -0.05
PCDH1-203ENST00000394536 DMKNQ6E0U4 476 aaPredicted RBP14.77□□□□□ -0.05
PCDH1-203ENST00000394536 VASNQ6EMK4 673 aa14.77□□□□□ -0.05
PCDH1-203ENST00000394536 OR10K2Q6IF99 312 aa14.77□□□□□ -0.05
PCDH1-203ENST00000394536 ZNF425Q6IV72 752 aa14.77□□□□□ -0.05
PCDH1-203ENST00000394536 TMEM184AQ6ZMB5 413 aa14.77□□□□□ -0.05
PCDH1-203ENST00000394536 MAMSTRQ6ZN01 415 aa14.77□□□□□ -0.05
PCDH1-203ENST00000394536 PM20D2Q8IYS1 436 aa14.77□□□□□ -0.05
PCDH1-203ENST00000394536 TMEM52Q8NDY8 209 aa14.77□□□□□ -0.05
PCDH1-203ENST00000394536 STACQ99469 402 aa14.77□□□□□ -0.05
PCDH1-203ENST00000394536 OR10A5Q9H207 317 aa14.77□□□□□ -0.05
PCDH1-203ENST00000394536 PPA2Q9H2U2 334 aa14.77□□□□□ -0.05
PCDH1-203ENST00000394536 TREM1Q9NP99 234 aa14.77□□□□□ -0.05
PCDH1-203ENST00000394536 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.76□□□□□ -0.05
PCDH1-203ENST00000394536 SDC3O75056 442 aa14.76□□□□□ -0.05
PCDH1-203ENST00000394536 GLCEO94923 617 aa14.76□□□□□ -0.05
PCDH1-203ENST00000394536 AKAIN1P0CW23 69 aa14.76□□□□□ -0.05
PCDH1-203ENST00000394536 RIDAP52758 137 aaKnown RBP14.76□□□□□ -0.05
PCDH1-203ENST00000394536 CXADRP78310 365 aa14.76□□□□□ -0.05
PCDH1-203ENST00000394536 SFRP5Q5T4F7 317 aa14.76□□□□□ -0.05
PCDH1-203ENST00000394536 SLC6A19Q695T7 634 aa14.76□□□□□ -0.05
PCDH1-203ENST00000394536 TSSK4Q6SA08 328 aa14.76□□□□□ -0.05
PCDH1-203ENST00000394536 GSG1LQ6UXU4 331 aa14.76□□□□□ -0.05
PCDH1-203ENST00000394536 STAC2Q6ZMT1 411 aa14.76□□□□□ -0.05
PCDH1-203ENST00000394536 LIX1LQ8IVB5 337 aa14.76□□□□□ -0.05
PCDH1-203ENST00000394536 GIMAP5Q96F15 307 aa14.76□□□□□ -0.05
PCDH1-203ENST00000394536 KLHDC7BQ96G42 594 aa14.76□□□□□ -0.05
PCDH1-203ENST00000394536 SCMH1Q96GD3 660 aa14.76□□□□□ -0.05
PCDH1-203ENST00000394536 SLC25A44Q96H78 314 aaPredicted RBP14.76□□□□□ -0.05
PCDH1-203ENST00000394536 CGGBP1Q9UFW8 167 aaPredicted RBP14.76□□□□□ -0.05
PCDH1-203ENST00000394536 TP53BP1Q12888 1972 aaPredicted RBP14.76□□□□□ -0.05
PCDH1-203ENST00000394536 FITM1A5D6W6 292 aa14.76□□□□□ -0.05
PCDH1-203ENST00000394536 PYCARD-AS1I3L0S3 204 aa14.76□□□□□ -0.05
PCDH1-203ENST00000394536 BLKP51451 505 aa14.76□□□□□ -0.05
PCDH1-203ENST00000394536 PRKXP51817 358 aa14.76□□□□□ -0.05
PCDH1-203ENST00000394536 DYRK1AQ13627 763 aa14.76□□□□□ -0.05
PCDH1-203ENST00000394536 GK2Q14410 553 aaPredicted RBP14.76□□□□□ -0.05
PCDH1-203ENST00000394536 AANATQ16613 207 aa14.76□□□□□ -0.05
PCDH1-203ENST00000394536 IDO2Q6ZQW0 420 aa14.76□□□□□ -0.05
PCDH1-203ENST00000394536 TMEM151BQ8IW70 566 aa14.76□□□□□ -0.05
PCDH1-203ENST00000394536 CCDC36Q8IYA8 594 aa14.76□□□□□ -0.05
PCDH1-203ENST00000394536 FAM181AQ8N9Y4 354 aa14.76□□□□□ -0.05
PCDH1-203ENST00000394536 ACBD4Q8NC06 268 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms