RNA–Protein interactions for RNA: ENST00000394241.3

TGFA-202, Transcript of transforming growth factor alpha, humanhuman

TSL 3

Gene TGFA, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-202ENST00000394241 ZNF43P17038 809 aa14.3□□□□□ -0.12
TGFA-202ENST00000394241 FUT1P19526 365 aa14.3□□□□□ -0.12
TGFA-202ENST00000394241 LSM11P83369 360 aaKnown RBP eCLIP14.3□□□□□ -0.12
TGFA-202ENST00000394241 C1DQ13901 141 aaKnown RBP14.3□□□□□ -0.12
TGFA-202ENST00000394241 CCNIQ14094 377 aa14.3□□□□□ -0.12
TGFA-202ENST00000394241 SEC23BQ15437 767 aa14.3□□□□□ -0.12
TGFA-202ENST00000394241 FBXL19-AS1Q494R0 122 aa14.3□□□□□ -0.12
TGFA-202ENST00000394241 TBPL2Q6SJ96 375 aa14.3□□□□□ -0.12
TGFA-202ENST00000394241 CASP12Q6UXS9 341 aa14.3□□□□□ -0.12
TGFA-202ENST00000394241 TFAP2EQ6VUC0 442 aa14.3□□□□□ -0.12
TGFA-202ENST00000394241 UEVLDQ8IX04 471 aa14.3□□□□□ -0.12
TGFA-202ENST00000394241 KDM8Q8N371 416 aa14.3□□□□□ -0.12
TGFA-202ENST00000394241 LRRC17Q8N6Y2 441 aa14.3□□□□□ -0.12
TGFA-202ENST00000394241 OR4K5Q8NGD3 323 aa14.3□□□□□ -0.12
TGFA-202ENST00000394241 LIPHQ8WWY8 451 aa14.3□□□□□ -0.12
TGFA-202ENST00000394241 TMEM45BQ96B21 275 aa14.3□□□□□ -0.12
TGFA-202ENST00000394241 ZNF775Q96BV0 537 aaPredicted RBP14.3□□□□□ -0.12
TGFA-202ENST00000394241 OXGR1Q96P68 337 aa14.3□□□□□ -0.12
TGFA-202ENST00000394241 FUZQ9BT04 418 aa14.3□□□□□ -0.12
TGFA-202ENST00000394241 PLSCR4Q9NRQ2 329 aa14.3□□□□□ -0.12
TGFA-202ENST00000394241 B3GAT1Q9P2W7 334 aa14.3□□□□□ -0.12
TGFA-202ENST00000394241 LOC102725191A0A1B0GVB3 256 aa14.29□□□□□ -0.12
TGFA-202ENST00000394241 EFCAB9A8MZ26 197 aa14.29□□□□□ -0.12
TGFA-202ENST00000394241 AKAP8O43823 692 aaKnown RBP14.29□□□□□ -0.12
TGFA-202ENST00000394241 OR10H3O60404 316 aa14.29□□□□□ -0.12
TGFA-202ENST00000394241 MRPL33O75394 65 aaKnown RBP14.29□□□□□ -0.12
TGFA-202ENST00000394241 MAKP20794 623 aa14.29□□□□□ -0.12
TGFA-202ENST00000394241 AHCYP23526 432 aa14.29□□□□□ -0.12
TGFA-202ENST00000394241 IFNGR2P38484 337 aa14.29□□□□□ -0.12
TGFA-202ENST00000394241 GPR4P46093 362 aa14.29□□□□□ -0.12
TGFA-202ENST00000394241 SLC9A3P48764 834 aa14.29□□□□□ -0.12
TGFA-202ENST00000394241 POU3F1Q03052 451 aaPredicted RBP14.29□□□□□ -0.12
TGFA-202ENST00000394241 GK3PQ14409 553 aa14.29□□□□□ -0.12
TGFA-202ENST00000394241 EXOC3L2Q2M3D2 409 aa14.29□□□□□ -0.12
TGFA-202ENST00000394241 CREB3L2Q70SY1 520 aa14.29□□□□□ -0.12
TGFA-202ENST00000394241 ZNF100Q8IYN0 542 aa14.29□□□□□ -0.12
TGFA-202ENST00000394241 PAPD5Q8NDF8 572 aaKnown RBP14.29□□□□□ -0.12
TGFA-202ENST00000394241 APH1AQ96BI3 265 aa14.29□□□□□ -0.12
TGFA-202ENST00000394241 FAM46AQ96IP4 442 aaKnown RBP14.29□□□□□ -0.12
TGFA-202ENST00000394241 RBM24Q9BX46 236 aaKnown RBP14.29□□□□□ -0.12
TGFA-202ENST00000394241 RASSF1Q9NS23 344 aa14.29□□□□□ -0.12
TGFA-202ENST00000394241 PARPBPQ9NWS1 579 aa14.29□□□□□ -0.12
TGFA-202ENST00000394241 FOXD3Q9UJU5 478 aaPredicted RBP14.29□□□□□ -0.12
TGFA-202ENST00000394241 SAMHD1Q9Y3Z3 626 aaKnown RBP14.29□□□□□ -0.12
TGFA-202ENST00000394241 NOX1Q9Y5S8 564 aa14.29□□□□□ -0.12
TGFA-202ENST00000394241 STAB1Q9NY15 2570 aa14.29□□□□□ -0.12
TGFA-202ENST00000394241 A8MXE2 369 aa14.28□□□□□ -0.12
TGFA-202ENST00000394241 C11orf98E9PRG8 122 aa14.28□□□□□ -0.12
TGFA-202ENST00000394241 MS4A18H0YCH9 400 aa14.28□□□□□ -0.12
TGFA-202ENST00000394241 BLOC1S5-TXNDC5H3BN57 136 aa14.28□□□□□ -0.12
TGFA-202ENST00000394241 GNGT2O14610 69 aa14.28□□□□□ -0.12
TGFA-202ENST00000394241 RNF13O43567 381 aa14.28□□□□□ -0.12
TGFA-202ENST00000394241 TRAF3IP2O43734 574 aaPredicted RBP14.28□□□□□ -0.12
TGFA-202ENST00000394241 HPRP00739 348 aa14.28□□□□□ -0.12
TGFA-202ENST00000394241 OR3A2P47893 321 aa14.28□□□□□ -0.12
TGFA-202ENST00000394241 LIMS1P48059 325 aa14.28□□□□□ -0.12
TGFA-202ENST00000394241 ACTR3P61158 418 aa14.28□□□□□ -0.12
TGFA-202ENST00000394241 ZP4Q12836 540 aa14.28□□□□□ -0.12
TGFA-202ENST00000394241 MS4A18Q3C1V0 323 aa14.28□□□□□ -0.12
TGFA-202ENST00000394241 BEND4Q6ZU67 534 aa14.28□□□□□ -0.12
TGFA-202ENST00000394241 TMPRSS11FQ6ZWK6 438 aa14.28□□□□□ -0.12
TGFA-202ENST00000394241 PXKQ7Z7A4 578 aa14.28□□□□□ -0.12
TGFA-202ENST00000394241 OAFQ86UD1 273 aa14.28□□□□□ -0.12
TGFA-202ENST00000394241 MEX3DQ86XN8 651 aaKnown RBP14.28□□□□□ -0.12
TGFA-202ENST00000394241 CDC20BQ86Y33 519 aa14.28□□□□□ -0.12
TGFA-202ENST00000394241 HRNRQ86YZ3 2850 aaPredicted RBP14.28□□□□□ -0.12
TGFA-202ENST00000394241 EPHX4Q8IUS5 362 aa14.28□□□□□ -0.12
TGFA-202ENST00000394241 LINC00471Q8N535 108 aa14.28□□□□□ -0.12
TGFA-202ENST00000394241 ZNF610Q8N9Z0 462 aa14.28□□□□□ -0.12
TGFA-202ENST00000394241 ANKK1Q8NFD2 765 aa14.28□□□□□ -0.12
TGFA-202ENST00000394241 RNASE6Q93091 150 aaKnown RBP14.28□□□□□ -0.12
TGFA-202ENST00000394241 SLCO4A1Q96BD0 722 aa14.28□□□□□ -0.12
TGFA-202ENST00000394241 ZNF385AQ96PM9 386 aaKnown RBP14.28□□□□□ -0.12
TGFA-202ENST00000394241 FANCFQ9NPI8 374 aa14.28□□□□□ -0.12
TGFA-202ENST00000394241 RCE1Q9Y256 329 aa14.28□□□□□ -0.12
TGFA-202ENST00000394241 HIF3AQ9Y2N7 669 aa14.28□□□□□ -0.12
TGFA-202ENST00000394241 SERPINI2O75830 405 aa14.27□□□□□ -0.13
TGFA-202ENST00000394241 CCNB2O95067 398 aa14.27□□□□□ -0.13
TGFA-202ENST00000394241 UQCRC1P31930 480 aa14.27□□□□□ -0.13
TGFA-202ENST00000394241 OMPP47874 163 aa14.27□□□□□ -0.13
TGFA-202ENST00000394241 HMGA2P52926 109 aa14.27□□□□□ -0.13
TGFA-202ENST00000394241 CLDN17P56750 224 aa14.27□□□□□ -0.13
TGFA-202ENST00000394241 RPL18Q07020 188 aaKnown RBP14.27□□□□□ -0.13
TGFA-202ENST00000394241 KPNB1Q14974 876 aaKnown RBP14.27□□□□□ -0.13
TGFA-202ENST00000394241 ANKDD1AQ495B1 522 aa14.27□□□□□ -0.13
TGFA-202ENST00000394241 ZNF474Q6S9Z5 364 aaPredicted RBP14.27□□□□□ -0.13
TGFA-202ENST00000394241 PAMR1Q6UXH9 720 aa14.27□□□□□ -0.13
TGFA-202ENST00000394241 AAED1Q7RTV5 226 aa14.27□□□□□ -0.13
TGFA-202ENST00000394241 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.27□□□□□ -0.13
TGFA-202ENST00000394241 ZIC4Q8N9L1 334 aa14.27□□□□□ -0.13
TGFA-202ENST00000394241 OR4C15Q8NGM1 316 aa14.27□□□□□ -0.13
TGFA-202ENST00000394241 OR13C2Q8NGS9 318 aa14.27□□□□□ -0.13
TGFA-202ENST00000394241 DUS3LQ96G46 650 aaKnown RBP14.27□□□□□ -0.13
TGFA-202ENST00000394241 NDEL1Q9GZM8 345 aa14.27□□□□□ -0.13
TGFA-202ENST00000394241 GALNT8Q9NY28 637 aa14.27□□□□□ -0.13
TGFA-202ENST00000394241 VNN3Q9NY84 501 aa14.27□□□□□ -0.13
TGFA-202ENST00000394241 TAS2R5Q9NYW4 299 aa14.27□□□□□ -0.13
TGFA-202ENST00000394241 U3KQV3 271 aa14.27□□□□□ -0.13
TGFA-202ENST00000394241 TRAV27A0A087WT01 109 aa14.26□□□□□ -0.13
TGFA-202ENST00000394241 FAM171A2A8MVW0 826 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms