RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 AKAP8O43823 692 aaKnown RBP13.18□□□□□ -0.3
CHMP3-202ENST00000393773 PNPP00491 289 aa13.18□□□□□ -0.3
CHMP3-202ENST00000393773 HPRP00739 348 aa13.18□□□□□ -0.3
CHMP3-202ENST00000393773 TCN1P20061 433 aaPredicted RBP13.18□□□□□ -0.3
CHMP3-202ENST00000393773 EPHA1P21709 976 aa13.18□□□□□ -0.3
CHMP3-202ENST00000393773 GRPRP30550 384 aa13.18□□□□□ -0.3
CHMP3-202ENST00000393773 GLRXP35754 106 aa13.18□□□□□ -0.3
CHMP3-202ENST00000393773 SLC1A6P48664 564 aa13.18□□□□□ -0.3
CHMP3-202ENST00000393773 SEC24CP53992 1094 aa13.18□□□□□ -0.3
CHMP3-202ENST00000393773 DSTNP60981 165 aa13.18□□□□□ -0.3
CHMP3-202ENST00000393773 MRPS11P82912 194 aaKnown RBP13.18□□□□□ -0.3
CHMP3-202ENST00000393773 IFFO1Q0D2I5 559 aa13.18□□□□□ -0.3
CHMP3-202ENST00000393773 GTDC1Q4AE62 458 aa13.18□□□□□ -0.3
CHMP3-202ENST00000393773 FAM69AQ5T7M9 428 aa13.18□□□□□ -0.3
CHMP3-202ENST00000393773 PEG10Q86TG7 708 aaKnown RBP13.18□□□□□ -0.3
CHMP3-202ENST00000393773 C20orf196Q8IYI0 205 aa13.18□□□□□ -0.3
CHMP3-202ENST00000393773 C3orf56Q8N813 242 aa13.18□□□□□ -0.3
CHMP3-202ENST00000393773 ADPRHL1Q8NDY3 354 aa13.18□□□□□ -0.3
CHMP3-202ENST00000393773 RDH5Q92781 318 aa13.18□□□□□ -0.3
CHMP3-202ENST00000393773 TAAR8Q969N4 342 aa13.18□□□□□ -0.3
CHMP3-202ENST00000393773 SLC35B4Q969S0 331 aa13.18□□□□□ -0.3
CHMP3-202ENST00000393773 RSPO3Q9BXY4 272 aaPredicted RBP13.18□□□□□ -0.3
CHMP3-202ENST00000393773 ROPN1BQ9BZX4 212 aaPredicted RBP13.18□□□□□ -0.3
CHMP3-202ENST00000393773 MS4A5Q9H3V2 200 aa13.18□□□□□ -0.3
CHMP3-202ENST00000393773 ROPN1Q9HAT0 212 aaPredicted RBP13.18□□□□□ -0.3
CHMP3-202ENST00000393773 TREM2Q9NZC2 230 aa13.18□□□□□ -0.3
CHMP3-202ENST00000393773 KLHL14Q9P2G3 628 aa13.18□□□□□ -0.3
CHMP3-202ENST00000393773 PCDHB10Q9UN67 800 aa13.18□□□□□ -0.3
CHMP3-202ENST00000393773 TRAV20A0A0B4J274 112 aa13.17□□□□□ -0.3
CHMP3-202ENST00000393773 LOC102725191A0A1B0GVB3 256 aa13.17□□□□□ -0.3
CHMP3-202ENST00000393773 AVPP01185 164 aa13.17□□□□□ -0.3
CHMP3-202ENST00000393773 CD79AP11912 226 aa13.17□□□□□ -0.3
CHMP3-202ENST00000393773 HLA-DOBP13765 273 aa13.17□□□□□ -0.3
CHMP3-202ENST00000393773 B4GALT1P15291 398 aa13.17□□□□□ -0.3
CHMP3-202ENST00000393773 HTR2AP28223 471 aa13.17□□□□□ -0.3
CHMP3-202ENST00000393773 CRATP43155 626 aa13.17□□□□□ -0.3
CHMP3-202ENST00000393773 C1DQ13901 141 aaKnown RBP13.17□□□□□ -0.3
CHMP3-202ENST00000393773 CARD17Q5XLA6 110 aa13.17□□□□□ -0.3
CHMP3-202ENST00000393773 REP15Q6BDI9 236 aa13.17□□□□□ -0.3
CHMP3-202ENST00000393773 KIRREL3Q8IZU9 778 aa13.17□□□□□ -0.3
CHMP3-202ENST00000393773 GCDHQ92947 438 aaPredicted RBP13.17□□□□□ -0.3
CHMP3-202ENST00000393773 SLC38A4Q969I6 547 aa13.17□□□□□ -0.3
CHMP3-202ENST00000393773 VPS33AQ96AX1 596 aa13.17□□□□□ -0.3
CHMP3-202ENST00000393773 RBM4Q9BWF3 364 aaKnown RBP13.17□□□□□ -0.3
CHMP3-202ENST00000393773 C12orf10Q9HB07 376 aa13.17□□□□□ -0.3
CHMP3-202ENST00000393773 PNPOQ9NVS9 261 aa13.17□□□□□ -0.3
CHMP3-202ENST00000393773 FZR1Q9UM11 496 aa13.17□□□□□ -0.3
CHMP3-202ENST00000393773 ARHGAP32A7KAX9 2087 aa13.16□□□□□ -0.3
CHMP3-202ENST00000393773 LOC105371242A0A075B767 164 aa13.16□□□□□ -0.3
CHMP3-202ENST00000393773 A0A0G2JPF8 293 aa13.16□□□□□ -0.3
CHMP3-202ENST00000393773 HNRNPCL2B2RXH8 293 aa13.16□□□□□ -0.3
CHMP3-202ENST00000393773 HNRNPCL3B7ZW38 293 aa13.16□□□□□ -0.3
CHMP3-202ENST00000393773 TRIM77I1YAP6 450 aa13.16□□□□□ -0.3
CHMP3-202ENST00000393773 OR2T1O43869 369 aa13.16□□□□□ -0.3
CHMP3-202ENST00000393773 HNRNPCL1O60812 293 aaKnown RBP13.16□□□□□ -0.3
CHMP3-202ENST00000393773 ZCCHC18P0CG32 403 aa13.16□□□□□ -0.3
CHMP3-202ENST00000393773 HNRNPCL4P0DMR1 293 aa13.16□□□□□ -0.3
CHMP3-202ENST00000393773 BGNP21810 368 aa13.16□□□□□ -0.3
CHMP3-202ENST00000393773 PTDSS1P48651 473 aaKnown RBP13.16□□□□□ -0.3
CHMP3-202ENST00000393773 RPS23P62266 143 aaKnown RBP13.16□□□□□ -0.3
CHMP3-202ENST00000393773 PIGFQ07326 219 aa13.16□□□□□ -0.3
CHMP3-202ENST00000393773 MFSD13AQ14CX5 517 aa13.16□□□□□ -0.3
CHMP3-202ENST00000393773 C5orf46Q6UWT4 87 aa13.16□□□□□ -0.3
CHMP3-202ENST00000393773 NHLRC1Q6VVB1 395 aa13.16□□□□□ -0.3
CHMP3-202ENST00000393773 ZNF813Q6ZN06 617 aa13.16□□□□□ -0.3
CHMP3-202ENST00000393773 H1FNTQ75WM6 255 aaPredicted RBP13.16□□□□□ -0.3
CHMP3-202ENST00000393773 COMTD1Q86VU5 262 aa13.16□□□□□ -0.3
CHMP3-202ENST00000393773 ZNF584Q8IVC4 421 aa13.16□□□□□ -0.3
CHMP3-202ENST00000393773 GLB1L3Q8NCI6 653 aaPredicted RBP13.16□□□□□ -0.3
CHMP3-202ENST00000393773 SLC41A3Q96GZ6 507 aa13.16□□□□□ -0.3
CHMP3-202ENST00000393773 EMC6Q9BV81 110 aa13.16□□□□□ -0.3
CHMP3-202ENST00000393773 ZNF385DQ9H6B1 395 aa13.16□□□□□ -0.3
CHMP3-202ENST00000393773 TPT1P8Q9HAU6 139 aa13.16□□□□□ -0.3
CHMP3-202ENST00000393773 IFT52Q9Y366 437 aa13.16□□□□□ -0.3
CHMP3-202ENST00000393773 TRAV36DV7A0A075B6V5 113 aa13.15□□□□□ -0.3
CHMP3-202ENST00000393773 A0A1B0GWA3 101 aa13.15□□□□□ -0.3
CHMP3-202ENST00000393773 MS4A18H0YCH9 400 aa13.15□□□□□ -0.3
CHMP3-202ENST00000393773 PPIHO43447 177 aaKnown RBP13.15□□□□□ -0.3
CHMP3-202ENST00000393773 NUDT7P0C024 238 aa13.15□□□□□ -0.3
CHMP3-202ENST00000393773 NAT2P11245 290 aa13.15□□□□□ -0.3
CHMP3-202ENST00000393773 CBLP22681 906 aa13.15□□□□□ -0.3
CHMP3-202ENST00000393773 GIPRP48546 466 aa13.15□□□□□ -0.3
CHMP3-202ENST00000393773 TMEM33P57088 247 aa13.15□□□□□ -0.3
CHMP3-202ENST00000393773 TRMT5Q32P41 509 aaKnown RBP13.15□□□□□ -0.3
CHMP3-202ENST00000393773 MS4A18Q3C1V0 323 aa13.15□□□□□ -0.3
CHMP3-202ENST00000393773 ZNF311Q5JNZ3 666 aa13.15□□□□□ -0.3
CHMP3-202ENST00000393773 C1QL2Q7Z5L3 287 aa13.15□□□□□ -0.3
CHMP3-202ENST00000393773 UEVLDQ8IX04 471 aa13.15□□□□□ -0.3
CHMP3-202ENST00000393773 LSMEM1Q8N8F7 131 aa13.15□□□□□ -0.3
CHMP3-202ENST00000393773 LRR1Q96L50 414 aa13.15□□□□□ -0.3
CHMP3-202ENST00000393773 ZBTB18Q99592 522 aa13.15□□□□□ -0.3
CHMP3-202ENST00000393773 ZNF416Q9BWM5 594 aa13.15□□□□□ -0.3
CHMP3-202ENST00000393773 TMPRSS13Q9BYE2 586 aa13.15□□□□□ -0.3
CHMP3-202ENST00000393773 DENND2DQ9H6A0 471 aaPredicted RBP13.15□□□□□ -0.3
CHMP3-202ENST00000393773 ARMC7Q9H6L4 198 aa13.15□□□□□ -0.3
CHMP3-202ENST00000393773 ESM1Q9NQ30 184 aa13.15□□□□□ -0.3
CHMP3-202ENST00000393773 MED29Q9NX70 200 aa13.15□□□□□ -0.3
CHMP3-202ENST00000393773 SLC7A8Q9UHI5 535 aa13.15□□□□□ -0.3
CHMP3-202ENST00000393773 NOX1Q9Y5S8 564 aa13.15□□□□□ -0.3
CHMP3-202ENST00000393773 PRKDCP78527 4128 aaKnown RBP13.15□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms