RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 PDLIM4P50479 330 aa14.37□□□□□ -0.11
PTPRK-208ENST00000392449 ATP4BP51164 291 aa14.37□□□□□ -0.11
PTPRK-208ENST00000392449 NPTX1Q15818 432 aa14.37□□□□□ -0.11
PTPRK-208ENST00000392449 FAM91A1Q658Y4 838 aa14.37□□□□□ -0.11
PTPRK-208ENST00000392449 C5orf46Q6UWT4 87 aa14.37□□□□□ -0.11
PTPRK-208ENST00000392449 NHLRC1Q6VVB1 395 aa14.37□□□□□ -0.11
PTPRK-208ENST00000392449 WDR88Q6ZMY6 472 aa14.37□□□□□ -0.11
PTPRK-208ENST00000392449 IL17RELQ6ZVW7 336 aa14.37□□□□□ -0.11
PTPRK-208ENST00000392449 DHDDSQ86SQ9 333 aa14.37□□□□□ -0.11
PTPRK-208ENST00000392449 SVOPLQ8N434 492 aa14.37□□□□□ -0.11
PTPRK-208ENST00000392449 C10orf53Q8N6V4 93 aa14.37□□□□□ -0.11
PTPRK-208ENST00000392449 HIPK4Q8NE63 616 aa14.37□□□□□ -0.11
PTPRK-208ENST00000392449 PIK3C3Q8NEB9 887 aa14.37□□□□□ -0.11
PTPRK-208ENST00000392449 GPR32P1Q8NGA4 272 aa14.37□□□□□ -0.11
PTPRK-208ENST00000392449 PROX1Q92786 737 aa14.37□□□□□ -0.11
PTPRK-208ENST00000392449 SLC41A3Q96GZ6 507 aa14.37□□□□□ -0.11
PTPRK-208ENST00000392449 ZNF317Q96PQ6 595 aaPredicted RBP14.37□□□□□ -0.11
PTPRK-208ENST00000392449 ZNF607Q96SK3 696 aa14.37□□□□□ -0.11
PTPRK-208ENST00000392449 PLK3Q9H4B4 646 aa14.37□□□□□ -0.11
PTPRK-208ENST00000392449 TMEM27Q9HBJ8 222 aa14.37□□□□□ -0.11
PTPRK-208ENST00000392449 SELENONQ9NZV5 590 aa14.37□□□□□ -0.11
PTPRK-208ENST00000392449 SLC13A4Q9UKG4 626 aa14.37□□□□□ -0.11
PTPRK-208ENST00000392449 FKBP7Q9Y680 259 aa14.37□□□□□ -0.11
PTPRK-208ENST00000392449 STAB1Q9NY15 2570 aa14.36□□□□□ -0.11
PTPRK-208ENST00000392449 IGHV4-61A0A0C4DH41 118 aa14.36□□□□□ -0.11
PTPRK-208ENST00000392449 SLC35F4A4IF30 521 aa14.36□□□□□ -0.11
PTPRK-208ENST00000392449 PRORSD1PA6NEY8 169 aa14.36□□□□□ -0.11
PTPRK-208ENST00000392449 RNF212BA8MTL3 300 aa14.36□□□□□ -0.11
PTPRK-208ENST00000392449 ZNF99A8MXY4 864 aaPredicted RBP14.36□□□□□ -0.11
PTPRK-208ENST00000392449 B9A039 149 aa14.36□□□□□ -0.11
PTPRK-208ENST00000392449 NR4A2P43354 598 aa14.36□□□□□ -0.11
PTPRK-208ENST00000392449 PCBP3P57721 371 aaKnown RBP14.36□□□□□ -0.11
PTPRK-208ENST00000392449 LSM11P83369 360 aaKnown RBP eCLIP14.36□□□□□ -0.11
PTPRK-208ENST00000392449 PIGFQ07326 219 aa14.36□□□□□ -0.11
PTPRK-208ENST00000392449 PMS2P3Q13401 168 aa14.36□□□□□ -0.11
PTPRK-208ENST00000392449 CAMK2DQ13557 499 aa14.36□□□□□ -0.11
PTPRK-208ENST00000392449 DUSP7Q16829 419 aa14.36□□□□□ -0.11
PTPRK-208ENST00000392449 CYP51A1Q16850 503 aa14.36□□□□□ -0.11
PTPRK-208ENST00000392449 CYB5R2Q6BCY4 276 aa14.36□□□□□ -0.11
PTPRK-208ENST00000392449 KRT80Q6KB66 452 aa14.36□□□□□ -0.11
PTPRK-208ENST00000392449 NET1Q7Z628 596 aaPredicted RBP14.36□□□□□ -0.11
PTPRK-208ENST00000392449 TSPYL5Q86VY4 417 aaPredicted RBP14.36□□□□□ -0.11
PTPRK-208ENST00000392449 RBM45Q8IUH3 476 aaKnown RBP14.36□□□□□ -0.11
PTPRK-208ENST00000392449 C20orf196Q8IYI0 205 aa14.36□□□□□ -0.11
PTPRK-208ENST00000392449 ADPRHL1Q8NDY3 354 aa14.36□□□□□ -0.11
PTPRK-208ENST00000392449 OR4D11Q8NGI4 311 aa14.36□□□□□ -0.11
PTPRK-208ENST00000392449 MCHR1Q99705 422 aa14.36□□□□□ -0.11
PTPRK-208ENST00000392449 PIMREGQ9BSJ6 248 aa14.36□□□□□ -0.11
PTPRK-208ENST00000392449 ASPNQ9BXN1 380 aa14.36□□□□□ -0.11
PTPRK-208ENST00000392449 ZNF385DQ9H6B1 395 aa14.36□□□□□ -0.11
PTPRK-208ENST00000392449 CORO2BQ9UQ03 480 aa14.36□□□□□ -0.11
PTPRK-208ENST00000392449 ANGPT4Q9Y264 503 aa14.36□□□□□ -0.11
PTPRK-208ENST00000392449 LOC102725191A0A1B0GVB3 256 aa14.35□□□□□ -0.11
PTPRK-208ENST00000392449 SH3PXD2BA1X283 911 aa14.35□□□□□ -0.11
PTPRK-208ENST00000392449 CPSF4LA6NMK7 179 aaKnown RBP14.35□□□□□ -0.11
PTPRK-208ENST00000392449 C11orf98E9PRG8 122 aa14.35□□□□□ -0.11
PTPRK-208ENST00000392449 hCG_2039718K7EN88 272 aa14.35□□□□□ -0.11
PTPRK-208ENST00000392449 SERPINB7O75635 380 aa14.35□□□□□ -0.11
PTPRK-208ENST00000392449 THY1P04216 161 aa14.35□□□□□ -0.11
PTPRK-208ENST00000392449 B4GALT1P15291 398 aa14.35□□□□□ -0.11
PTPRK-208ENST00000392449 PUDPQ08623 228 aa14.35□□□□□ -0.11
PTPRK-208ENST00000392449 EFNB3Q15768 340 aa14.35□□□□□ -0.11
PTPRK-208ENST00000392449 MSMPQ1L6U9 139 aa14.35□□□□□ -0.11
PTPRK-208ENST00000392449 C3orf36Q3SXR2 165 aa14.35□□□□□ -0.11
PTPRK-208ENST00000392449 PODNL1Q6PEZ8 512 aa14.35□□□□□ -0.11
PTPRK-208ENST00000392449 SPATA21Q7Z572 469 aa14.35□□□□□ -0.11
PTPRK-208ENST00000392449 RANBP3LQ86VV4 465 aaPredicted RBP14.35□□□□□ -0.11
PTPRK-208ENST00000392449 PHC2Q8IXK0 858 aa14.35□□□□□ -0.11
PTPRK-208ENST00000392449 CDK20Q8IZL9 346 aa14.35□□□□□ -0.11
PTPRK-208ENST00000392449 FAM169BQ8N8A8 192 aa14.35□□□□□ -0.11
PTPRK-208ENST00000392449 ANKK1Q8NFD2 765 aa14.35□□□□□ -0.11
PTPRK-208ENST00000392449 NUP37Q8NFH4 326 aa14.35□□□□□ -0.11
PTPRK-208ENST00000392449 OR4F15Q8NGB8 312 aa14.35□□□□□ -0.11
PTPRK-208ENST00000392449 OR6T1Q8NGN1 323 aa14.35□□□□□ -0.11
PTPRK-208ENST00000392449 SPATA3Q8NHX4 192 aa14.35□□□□□ -0.11
PTPRK-208ENST00000392449 VANGL1Q8TAA9 524 aaPredicted RBP14.35□□□□□ -0.11
PTPRK-208ENST00000392449 ANKRD27Q96NW4 1050 aa14.35□□□□□ -0.11
PTPRK-208ENST00000392449 ARHGDIGQ99819 225 aa14.35□□□□□ -0.11
PTPRK-208ENST00000392449 SOX7Q9BT81 388 aa14.35□□□□□ -0.11
PTPRK-208ENST00000392449 CHODLQ9H9P2 273 aa14.35□□□□□ -0.11
PTPRK-208ENST00000392449 INTS9Q9NV88 658 aaKnown RBP14.35□□□□□ -0.11
PTPRK-208ENST00000392449 LEF1Q9UJU2 399 aaPredicted RBP14.35□□□□□ -0.11
PTPRK-208ENST00000392449 TMEM129A0AVI4 362 aa14.34□□□□□ -0.11
PTPRK-208ENST00000392449 M0QX08 132 aa14.34□□□□□ -0.11
PTPRK-208ENST00000392449 PLPP3O14495 311 aa14.34□□□□□ -0.11
PTPRK-208ENST00000392449 AKAP8O43823 692 aaKnown RBP14.34□□□□□ -0.11
PTPRK-208ENST00000392449 PDE5AO76074 875 aa14.34□□□□□ -0.11
PTPRK-208ENST00000392449 IGFBP1P08833 259 aaPredicted RBP14.34□□□□□ -0.11
PTPRK-208ENST00000392449 CD79AP11912 226 aa14.34□□□□□ -0.11
PTPRK-208ENST00000392449 HOXB1P14653 301 aaPredicted RBP14.34□□□□□ -0.11
PTPRK-208ENST00000392449 AHCYP23526 432 aa14.34□□□□□ -0.11
PTPRK-208ENST00000392449 IGFBP5P24593 272 aa14.34□□□□□ -0.11
PTPRK-208ENST00000392449 SNTB2Q13425 540 aaKnown RBP14.34□□□□□ -0.11
PTPRK-208ENST00000392449 ZNF813Q6ZN06 617 aa14.34□□□□□ -0.11
PTPRK-208ENST00000392449 SCAIQ8N9R8 606 aa14.34□□□□□ -0.11
PTPRK-208ENST00000392449 C11orf65Q8NCR3 313 aa14.34□□□□□ -0.11
PTPRK-208ENST00000392449 MSI2Q96DH6 328 aaKnown RBP14.34□□□□□ -0.11
PTPRK-208ENST00000392449 EPYCQ99645 322 aa14.34□□□□□ -0.11
PTPRK-208ENST00000392449 CGREF1Q99674 301 aa14.34□□□□□ -0.11
PTPRK-208ENST00000392449 REPIN1Q9BWE0 567 aaKnown RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms