RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 SHEQ5VZ18 495 aa11.11□□□□□ -0.63
GGPS1-203ENST00000391855 ANKRD16Q6P6B7 361 aa11.11□□□□□ -0.63
GGPS1-203ENST00000391855 C16orf89Q6UX73 402 aa11.11□□□□□ -0.63
GGPS1-203ENST00000391855 HDDC2Q7Z4H3 204 aa11.11□□□□□ -0.63
GGPS1-203ENST00000391855 DEPDC4Q8N2C3 294 aa11.11□□□□□ -0.63
GGPS1-203ENST00000391855 WDR31Q8NA23 367 aa11.11□□□□□ -0.63
GGPS1-203ENST00000391855 SGTBQ96EQ0 304 aa11.11□□□□□ -0.63
GGPS1-203ENST00000391855 CXorf56Q9H5V9 222 aa11.11□□□□□ -0.63
GGPS1-203ENST00000391855 FAIMQ9NVQ4 179 aa11.11□□□□□ -0.63
GGPS1-203ENST00000391855 ADA2Q9NZK5 511 aa11.11□□□□□ -0.63
GGPS1-203ENST00000391855 MAGEL2Q9UJ55 1249 aa11.11□□□□□ -0.63
GGPS1-203ENST00000391855 A4GNTQ9UNA3 340 aa11.11□□□□□ -0.63
GGPS1-203ENST00000391855 SAMD4AQ9UPU9 718 aaKnown RBP11.11□□□□□ -0.63
GGPS1-203ENST00000391855 ARPC4-TTLL3A0A0A6YYG9 625 aa11.1□□□□□ -0.63
GGPS1-203ENST00000391855 ABCD4O14678 606 aa11.1□□□□□ -0.63
GGPS1-203ENST00000391855 OR7A10O76100 309 aa11.1□□□□□ -0.63
GGPS1-203ENST00000391855 PLAUP00749 431 aa11.1□□□□□ -0.63
GGPS1-203ENST00000391855 ASAH2BP0C7U1 165 aa11.1□□□□□ -0.63
GGPS1-203ENST00000391855 CD40P25942 277 aa11.1□□□□□ -0.63
GGPS1-203ENST00000391855 UGT2B15P54855 530 aa11.1□□□□□ -0.63
GGPS1-203ENST00000391855 KRT72Q14CN4 511 aa11.1□□□□□ -0.63
GGPS1-203ENST00000391855 TRAM2Q15035 370 aa11.1□□□□□ -0.63
GGPS1-203ENST00000391855 TBRG1Q3YBR2 411 aa11.1□□□□□ -0.63
GGPS1-203ENST00000391855 ZNF672Q499Z4 452 aaPredicted RBP11.1□□□□□ -0.63
GGPS1-203ENST00000391855 FKBP9P1Q75LS8 142 aa11.1□□□□□ -0.63
GGPS1-203ENST00000391855 SLC46A3Q7Z3Q1 461 aa11.1□□□□□ -0.63
GGPS1-203ENST00000391855 CYP4Z1Q86W10 505 aa11.1□□□□□ -0.63
GGPS1-203ENST00000391855 NKAIN4Q8IVV8 208 aa11.1□□□□□ -0.63
GGPS1-203ENST00000391855 CCDC36Q8IYA8 594 aa11.1□□□□□ -0.63
GGPS1-203ENST00000391855 C20orf196Q8IYI0 205 aa11.1□□□□□ -0.63
GGPS1-203ENST00000391855 KBTBD8Q8NFY9 601 aa11.1□□□□□ -0.63
GGPS1-203ENST00000391855 TMEM255BQ8WV15 326 aa11.1□□□□□ -0.63
GGPS1-203ENST00000391855 LIPHQ8WWY8 451 aa11.1□□□□□ -0.63
GGPS1-203ENST00000391855 HSH2DQ96JZ2 352 aa11.1□□□□□ -0.63
GGPS1-203ENST00000391855 CCT8L2Q96SF2 557 aa11.1□□□□□ -0.63
GGPS1-203ENST00000391855 FNDC11Q9BVV2 318 aa11.1□□□□□ -0.63
GGPS1-203ENST00000391855 ANKRD19PQ9H560 264 aa11.1□□□□□ -0.63
GGPS1-203ENST00000391855 GPR35Q9HC97 309 aa11.1□□□□□ -0.63
GGPS1-203ENST00000391855 MEPEQ9NQ76 525 aaPredicted RBP11.1□□□□□ -0.63
GGPS1-203ENST00000391855 GMPR2Q9P2T1 348 aaKnown RBP11.1□□□□□ -0.63
GGPS1-203ENST00000391855 STX18Q9P2W9 335 aaKnown RBP11.1□□□□□ -0.63
GGPS1-203ENST00000391855 AKAP6Q13023 2319 aa11.1□□□□□ -0.63
GGPS1-203ENST00000391855 TACC2O95359 2948 aa11.1□□□□□ -0.63
GGPS1-203ENST00000391855 OTOGQ6ZRI0 2925 aa11.1□□□□□ -0.63
GGPS1-203ENST00000391855 SLC35F4A4IF30 521 aa11.09□□□□□ -0.63
GGPS1-203ENST00000391855 ZNF99A8MXY4 864 aaPredicted RBP11.09□□□□□ -0.63
GGPS1-203ENST00000391855 RNF13O43567 381 aa11.09□□□□□ -0.63
GGPS1-203ENST00000391855 SHOX2O60902 331 aaPredicted RBP11.09□□□□□ -0.63
GGPS1-203ENST00000391855 ENTPD5O75356 428 aa11.09□□□□□ -0.63
GGPS1-203ENST00000391855 HLA-DOBP13765 273 aa11.09□□□□□ -0.63
GGPS1-203ENST00000391855 HSD17B1P14061 328 aa11.09□□□□□ -0.63
GGPS1-203ENST00000391855 PAX1P15863 534 aa11.09□□□□□ -0.63
GGPS1-203ENST00000391855 CDH2P19022 906 aaPredicted RBP11.09□□□□□ -0.63
GGPS1-203ENST00000391855 CSNK1A1P48729 337 aa11.09□□□□□ -0.63
GGPS1-203ENST00000391855 ZNF83P51522 516 aa11.09□□□□□ -0.63
GGPS1-203ENST00000391855 CDH11P55287 796 aa11.09□□□□□ -0.63
GGPS1-203ENST00000391855 RPS4XP62701 263 aaKnown RBP11.09□□□□□ -0.63
GGPS1-203ENST00000391855 FXNQ16595 210 aa11.09□□□□□ -0.63
GGPS1-203ENST00000391855 C3orf36Q3SXR2 165 aa11.09□□□□□ -0.63
GGPS1-203ENST00000391855 GLYATQ6IB77 296 aa11.09□□□□□ -0.63
GGPS1-203ENST00000391855 NHLRC1Q6VVB1 395 aa11.09□□□□□ -0.63
GGPS1-203ENST00000391855 SLC35D2Q76EJ3 337 aa11.09□□□□□ -0.63
GGPS1-203ENST00000391855 LINGO2Q7L985 606 aa11.09□□□□□ -0.63
GGPS1-203ENST00000391855 VTCN1Q7Z7D3 282 aa11.09□□□□□ -0.63
GGPS1-203ENST00000391855 TGIF2LYQ8IUE0 185 aa11.09□□□□□ -0.63
GGPS1-203ENST00000391855 FAM169BQ8N8A8 192 aa11.09□□□□□ -0.63
GGPS1-203ENST00000391855 CCDC197Q8NCU1 140 aa11.09□□□□□ -0.63
GGPS1-203ENST00000391855 OR6N1Q8NGY5 312 aa11.09□□□□□ -0.63
GGPS1-203ENST00000391855 OR6X1Q8NH79 312 aa11.09□□□□□ -0.63
GGPS1-203ENST00000391855 IGFBPL1Q8WX77 278 aa11.09□□□□□ -0.63
GGPS1-203ENST00000391855 BCL2L2Q92843 193 aaPredicted RBP11.09□□□□□ -0.63
GGPS1-203ENST00000391855 GSX2Q9BZM3 304 aa11.09□□□□□ -0.63
GGPS1-203ENST00000391855 GORASP2Q9H8Y8 452 aa11.09□□□□□ -0.63
GGPS1-203ENST00000391855 CRLF2Q9HC73 371 aa11.09□□□□□ -0.63
GGPS1-203ENST00000391855 MED29Q9NX70 200 aa11.09□□□□□ -0.63
GGPS1-203ENST00000391855 CSMD1Q96PZ7 3565 aa11.09□□□□□ -0.63
GGPS1-203ENST00000391855 HRNRQ86YZ3 2850 aaPredicted RBP11.09□□□□□ -0.63
GGPS1-203ENST00000391855 PRRC2AP48634 2157 aaKnown RBP11.09□□□□□ -0.63
GGPS1-203ENST00000391855 CSMD2Q7Z408 3487 aa11.09□□□□□ -0.63
GGPS1-203ENST00000391855 A0A1W2PR80 420 aa11.09□□□□□ -0.63
GGPS1-203ENST00000391855 A0A1W2PRG6 482 aa11.09□□□□□ -0.63
GGPS1-203ENST00000391855 NPIPB13A6NJU9 1138 aa11.09□□□□□ -0.63
GGPS1-203ENST00000391855 CENPBD1B2RD01 187 aa11.09□□□□□ -0.63
GGPS1-203ENST00000391855 SHISA9B4DS77 424 aa11.09□□□□□ -0.63
GGPS1-203ENST00000391855 NPIPB4C9JG80 1138 aa11.09□□□□□ -0.63
GGPS1-203ENST00000391855 C11orf98E9PRG8 122 aa11.09□□□□□ -0.63
GGPS1-203ENST00000391855 M0R1B8 84 aa11.09□□□□□ -0.63
GGPS1-203ENST00000391855 SERPINI2O75830 405 aa11.09□□□□□ -0.63
GGPS1-203ENST00000391855 NR2C1P13056 603 aa11.09□□□□□ -0.63
GGPS1-203ENST00000391855 FUT1P19526 365 aa11.09□□□□□ -0.63
GGPS1-203ENST00000391855 BIDP55957 195 aa11.09□□□□□ -0.63
GGPS1-203ENST00000391855 NKX6-1P78426 367 aaPredicted RBP11.09□□□□□ -0.63
GGPS1-203ENST00000391855 MXRA7P84157 204 aa11.09□□□□□ -0.63
GGPS1-203ENST00000391855 LGALS3BPQ08380 585 aa11.09□□□□□ -0.63
GGPS1-203ENST00000391855 CEACAM16Q2WEN9 425 aa11.09□□□□□ -0.63
GGPS1-203ENST00000391855 ANKDD1AQ495B1 522 aa11.09□□□□□ -0.63
GGPS1-203ENST00000391855 HIKESHIQ53FT3 197 aa11.09□□□□□ -0.63
GGPS1-203ENST00000391855 PRSS57Q6UWY2 283 aa11.09□□□□□ -0.63
GGPS1-203ENST00000391855 RNF113BQ8IZP6 322 aaKnown RBP11.09□□□□□ -0.63
GGPS1-203ENST00000391855 PFN4Q8NHR9 129 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms