RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 ENTPD5O75356 428 aa11.29□□□□□ -0.6
RPAIN-202ENST00000381208 C8BP07358 591 aa11.29□□□□□ -0.6
RPAIN-202ENST00000381208 CECR9P0C854 216 aa11.29□□□□□ -0.6
RPAIN-202ENST00000381208 NQO1P15559 274 aaKnown RBP11.29□□□□□ -0.6
RPAIN-202ENST00000381208 HTR2AP28223 471 aa11.29□□□□□ -0.6
RPAIN-202ENST00000381208 PPOXP50336 477 aa11.29□□□□□ -0.6
RPAIN-202ENST00000381208 IL1RL1Q01638 556 aa11.29□□□□□ -0.6
RPAIN-202ENST00000381208 MST1LQ2TV78 715 aa11.29□□□□□ -0.6
RPAIN-202ENST00000381208 AGKQ53H12 422 aa11.29□□□□□ -0.6
RPAIN-202ENST00000381208 PAGE3Q5JUK9 113 aa11.29□□□□□ -0.6
RPAIN-202ENST00000381208 SLC46A3Q7Z3Q1 461 aa11.29□□□□□ -0.6
RPAIN-202ENST00000381208 ARMC8Q8IUR7 673 aa11.29□□□□□ -0.6
RPAIN-202ENST00000381208 KDM8Q8N371 416 aa11.29□□□□□ -0.6
RPAIN-202ENST00000381208 C11orf65Q8NCR3 313 aa11.29□□□□□ -0.6
RPAIN-202ENST00000381208 TSPEARQ8WU66 669 aa11.29□□□□□ -0.6
RPAIN-202ENST00000381208 SLC41A3Q96GZ6 507 aa11.29□□□□□ -0.6
RPAIN-202ENST00000381208 ANKRD27Q96NW4 1050 aa11.29□□□□□ -0.6
RPAIN-202ENST00000381208 EBF4Q9BQW3 602 aa11.29□□□□□ -0.6
RPAIN-202ENST00000381208 SIKE1Q9BRV8 207 aa11.29□□□□□ -0.6
RPAIN-202ENST00000381208 TMEM43Q9BTV4 400 aa11.29□□□□□ -0.6
RPAIN-202ENST00000381208 RAB1BQ9H0U4 201 aa11.29□□□□□ -0.6
RPAIN-202ENST00000381208 DENND2DQ9H6A0 471 aaPredicted RBP11.29□□□□□ -0.6
RPAIN-202ENST00000381208 CRLF2Q9HC73 371 aa11.29□□□□□ -0.6
RPAIN-202ENST00000381208 GPR35Q9HC97 309 aa11.29□□□□□ -0.6
RPAIN-202ENST00000381208 SLAMF8Q9P0V8 285 aa11.29□□□□□ -0.6
RPAIN-202ENST00000381208 KLHL14Q9P2G3 628 aa11.29□□□□□ -0.6
RPAIN-202ENST00000381208 NOX1Q9Y5S8 564 aa11.29□□□□□ -0.6
RPAIN-202ENST00000381208 ARFGEF3Q5TH69 2177 aa11.29□□□□□ -0.6
RPAIN-202ENST00000381208 STAB1Q9NY15 2570 aa11.29□□□□□ -0.6
RPAIN-202ENST00000381208 A0A096LPE4 126 aa11.28□□□□□ -0.6
RPAIN-202ENST00000381208 A0A1W2PPZ6 126 aa11.28□□□□□ -0.6
RPAIN-202ENST00000381208 FAM181BA6NEQ2 426 aa11.28□□□□□ -0.6
RPAIN-202ENST00000381208 ZNF99A8MXY4 864 aaPredicted RBP11.28□□□□□ -0.6
RPAIN-202ENST00000381208 TRAF3IP2O43734 574 aaPredicted RBP11.28□□□□□ -0.6
RPAIN-202ENST00000381208 MT-ATP6P00846 226 aa11.28□□□□□ -0.6
RPAIN-202ENST00000381208 OR4A8P0C604 315 aa11.28□□□□□ -0.6
RPAIN-202ENST00000381208 FAM157CP0CG43 387 aa11.28□□□□□ -0.6
RPAIN-202ENST00000381208 ARF1P84077 181 aaKnown RBP11.28□□□□□ -0.6
RPAIN-202ENST00000381208 OR1Q1Q15612 314 aa11.28□□□□□ -0.6
RPAIN-202ENST00000381208 CEACAM16Q2WEN9 425 aa11.28□□□□□ -0.6
RPAIN-202ENST00000381208 ZNF613Q6PF04 617 aa11.28□□□□□ -0.6
RPAIN-202ENST00000381208 LINGO2Q7L985 606 aa11.28□□□□□ -0.6
RPAIN-202ENST00000381208 DPP10Q8N608 796 aa11.28□□□□□ -0.6
RPAIN-202ENST00000381208 RNF217Q8TC41 542 aa11.28□□□□□ -0.6
RPAIN-202ENST00000381208 NEU4Q8WWR8 484 aaPredicted RBP11.28□□□□□ -0.6
RPAIN-202ENST00000381208 NANOS1Q8WY41 292 aaKnown RBP11.28□□□□□ -0.6
RPAIN-202ENST00000381208 OR2M2Q96R28 347 aa11.28□□□□□ -0.6
RPAIN-202ENST00000381208 NELFAQ9H3P2 528 aa11.28□□□□□ -0.6
RPAIN-202ENST00000381208 PLK3Q9H4B4 646 aa11.28□□□□□ -0.6
RPAIN-202ENST00000381208 SLC52A3Q9NQ40 469 aa11.28□□□□□ -0.6
RPAIN-202ENST00000381208 MRGBPQ9NV56 204 aa11.28□□□□□ -0.6
RPAIN-202ENST00000381208 INTS9Q9NV88 658 aaKnown RBP11.28□□□□□ -0.6
RPAIN-202ENST00000381208 MRPL39Q9NYK5 338 aaKnown RBP11.28□□□□□ -0.6
RPAIN-202ENST00000381208 FBXL3Q9UKT7 428 aa11.28□□□□□ -0.6
RPAIN-202ENST00000381208 NDUFAF1Q9Y375 327 aa11.28□□□□□ -0.6
RPAIN-202ENST00000381208 IGKV1D-42A0A075B6H8 117 aa11.28□□□□□ -0.6
RPAIN-202ENST00000381208 ZNF726A6NNF4 738 aa11.28□□□□□ -0.6
RPAIN-202ENST00000381208 GPRIN2O60269 458 aa11.28□□□□□ -0.6
RPAIN-202ENST00000381208 MFN2O95140 757 aa11.28□□□□□ -0.6
RPAIN-202ENST00000381208 NPR2P20594 1047 aa11.28□□□□□ -0.6
RPAIN-202ENST00000381208 IDH3GP51553 393 aaPredicted RBP11.28□□□□□ -0.6
RPAIN-202ENST00000381208 LGALS3BPQ08380 585 aa11.28□□□□□ -0.6
RPAIN-202ENST00000381208 PUDPQ08623 228 aa11.28□□□□□ -0.6
RPAIN-202ENST00000381208 PMS2P3Q13401 168 aa11.28□□□□□ -0.6
RPAIN-202ENST00000381208 ADIPOQQ15848 244 aa11.28□□□□□ -0.6
RPAIN-202ENST00000381208 RUNDC3AQ59EK9 446 aa11.28□□□□□ -0.6
RPAIN-202ENST00000381208 DLEU7Q6UYE1 221 aa11.28□□□□□ -0.6
RPAIN-202ENST00000381208 LIAT1Q6ZQX7 453 aa11.28□□□□□ -0.6
RPAIN-202ENST00000381208 PXKQ7Z7A4 578 aa11.28□□□□□ -0.6
RPAIN-202ENST00000381208 C20orf196Q8IYI0 205 aa11.28□□□□□ -0.6
RPAIN-202ENST00000381208 TMEM123Q8N131 208 aa11.28□□□□□ -0.6
RPAIN-202ENST00000381208 TMEM158Q8WZ71 300 aa11.28□□□□□ -0.6
RPAIN-202ENST00000381208 HTRA1Q92743 480 aa11.28□□□□□ -0.6
RPAIN-202ENST00000381208 SORCS2Q96PQ0 1159 aa11.28□□□□□ -0.6
RPAIN-202ENST00000381208 VRK1Q99986 396 aaPredicted RBP11.28□□□□□ -0.6
RPAIN-202ENST00000381208 BEX2Q9BXY8 128 aa11.28□□□□□ -0.6
RPAIN-202ENST00000381208 SPEF1Q9Y4P9 236 aa11.28□□□□□ -0.6
RPAIN-202ENST00000381208 ANK3Q12955 4377 aaKnown RBP11.27□□□□□ -0.61
RPAIN-202ENST00000381208 VWC2LB2RUY7 222 aa11.27□□□□□ -0.61
RPAIN-202ENST00000381208 ANGPT2O15123 496 aa11.27□□□□□ -0.61
RPAIN-202ENST00000381208 CHP2O43745 196 aa11.27□□□□□ -0.61
RPAIN-202ENST00000381208 TPST1O60507 370 aa11.27□□□□□ -0.61
RPAIN-202ENST00000381208 BGLAPP02818 100 aa11.27□□□□□ -0.61
RPAIN-202ENST00000381208 THBS2P35442 1172 aa11.27□□□□□ -0.61
RPAIN-202ENST00000381208 NR4A2P43354 598 aa11.27□□□□□ -0.61
RPAIN-202ENST00000381208 CAPZA2P47755 286 aa11.27□□□□□ -0.61
RPAIN-202ENST00000381208 PCBP3P57721 371 aaKnown RBP11.27□□□□□ -0.61
RPAIN-202ENST00000381208 POU3F1Q03052 451 aaPredicted RBP11.27□□□□□ -0.61
RPAIN-202ENST00000381208 ADRM1Q16186 407 aa11.27□□□□□ -0.61
RPAIN-202ENST00000381208 CYP51A1Q16850 503 aa11.27□□□□□ -0.61
RPAIN-202ENST00000381208 INTS11Q5TA45 600 aaKnown RBP11.27□□□□□ -0.61
RPAIN-202ENST00000381208 VHLLQ6RSH7 139 aa11.27□□□□□ -0.61
RPAIN-202ENST00000381208 ZNF627Q7L945 461 aa11.27□□□□□ -0.61
RPAIN-202ENST00000381208 DHDDSQ86SQ9 333 aa11.27□□□□□ -0.61
RPAIN-202ENST00000381208 PATL1Q86TB9 770 aaKnown RBP11.27□□□□□ -0.61
RPAIN-202ENST00000381208 RASSF5Q8WWW0 418 aa11.27□□□□□ -0.61
RPAIN-202ENST00000381208 CGREF1Q99674 301 aa11.27□□□□□ -0.61
RPAIN-202ENST00000381208 CPPED1Q9BRF8 314 aaPredicted RBP11.27□□□□□ -0.61
RPAIN-202ENST00000381208 SEC14L4Q9UDX3 406 aa11.27□□□□□ -0.61
RPAIN-202ENST00000381208 KCNS2Q9ULS6 477 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms