RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 LSP1P33241 339 aa13.79□□□□□ -0.2
VCX3A-201ENST00000381089 MDH1P40925 334 aaKnown RBP13.79□□□□□ -0.2
VCX3A-201ENST00000381089 GALK2Q01415 458 aa13.79□□□□□ -0.2
VCX3A-201ENST00000381089 GSG1Q2KHT4 349 aa13.79□□□□□ -0.2
VCX3A-201ENST00000381089 FAM69AQ5T7M9 428 aa13.79□□□□□ -0.2
VCX3A-201ENST00000381089 GKAP1Q5VSY0 366 aaPredicted RBP13.79□□□□□ -0.2
VCX3A-201ENST00000381089 NET1Q7Z628 596 aaPredicted RBP13.79□□□□□ -0.2
VCX3A-201ENST00000381089 SERPINA11Q86U17 422 aa13.79□□□□□ -0.2
VCX3A-201ENST00000381089 CLIP4Q8N3C7 705 aa13.79□□□□□ -0.2
VCX3A-201ENST00000381089 C3orf56Q8N813 242 aa13.79□□□□□ -0.2
VCX3A-201ENST00000381089 SLC38A5Q8WUX1 472 aa13.79□□□□□ -0.2
VCX3A-201ENST00000381089 RDH5Q92781 318 aa13.79□□□□□ -0.2
VCX3A-201ENST00000381089 SLC38A4Q969I6 547 aa13.79□□□□□ -0.2
VCX3A-201ENST00000381089 SLC35B4Q969S0 331 aa13.79□□□□□ -0.2
VCX3A-201ENST00000381089 HIF1ANQ9NWT6 349 aa13.79□□□□□ -0.2
VCX3A-201ENST00000381089 HAO1Q9UJM8 370 aa13.79□□□□□ -0.2
VCX3A-201ENST00000381089 VENTXO95231 258 aa13.78□□□□□ -0.2
VCX3A-201ENST00000381089 MSMBP08118 114 aa13.78□□□□□ -0.2
VCX3A-201ENST00000381089 ALDOCP09972 364 aaKnown RBP13.78□□□□□ -0.2
VCX3A-201ENST00000381089 ETFAP13804 333 aa13.78□□□□□ -0.2
VCX3A-201ENST00000381089 MAPK11Q15759 364 aa13.78□□□□□ -0.2
VCX3A-201ENST00000381089 PDCD4Q53EL6 469 aaKnown RBP13.78□□□□□ -0.2
VCX3A-201ENST00000381089 ZNF311Q5JNZ3 666 aa13.78□□□□□ -0.2
VCX3A-201ENST00000381089 H1FNTQ75WM6 255 aaPredicted RBP13.78□□□□□ -0.2
VCX3A-201ENST00000381089 UEVLDQ8IX04 471 aa13.78□□□□□ -0.2
VCX3A-201ENST00000381089 SEMA6DQ8NFY4 1073 aa13.78□□□□□ -0.2
VCX3A-201ENST00000381089 OR51F2Q8NH61 342 aa13.78□□□□□ -0.2
VCX3A-201ENST00000381089 SGMS2Q8NHU3 365 aa13.78□□□□□ -0.2
VCX3A-201ENST00000381089 GCDHQ92947 438 aaPredicted RBP13.78□□□□□ -0.2
VCX3A-201ENST00000381089 KTI12Q96EK9 354 aaPredicted RBP13.78□□□□□ -0.2
VCX3A-201ENST00000381089 C7orf26Q96N11 449 aa13.78□□□□□ -0.2
VCX3A-201ENST00000381089 OR2M2Q96R28 347 aa13.78□□□□□ -0.2
VCX3A-201ENST00000381089 JMJD8Q96S16 334 aa13.78□□□□□ -0.2
VCX3A-201ENST00000381089 PTDSS2Q9BVG9 487 aa13.78□□□□□ -0.2
VCX3A-201ENST00000381089 MRPL37Q9BZE1 423 aaKnown RBP13.78□□□□□ -0.2
VCX3A-201ENST00000381089 RMND5AQ9H871 391 aa13.78□□□□□ -0.2
VCX3A-201ENST00000381089 C12orf10Q9HB07 376 aa13.78□□□□□ -0.2
VCX3A-201ENST00000381089 FBXL3Q9UKT7 428 aa13.78□□□□□ -0.2
VCX3A-201ENST00000381089 LOC102725191A0A1B0GVB3 256 aa13.77□□□□□ -0.21
VCX3A-201ENST00000381089 TRIM77I1YAP6 450 aa13.77□□□□□ -0.21
VCX3A-201ENST00000381089 M0R082 166 aa13.77□□□□□ -0.21
VCX3A-201ENST00000381089 M0R3G1 203 aa13.77□□□□□ -0.21
VCX3A-201ENST00000381089 RAB36O95755 333 aa13.77□□□□□ -0.21
VCX3A-201ENST00000381089 VIMP08670 466 aaKnown RBP13.77□□□□□ -0.21
VCX3A-201ENST00000381089 ANPEPP15144 967 aa13.77□□□□□ -0.21
VCX3A-201ENST00000381089 NQO1P15559 274 aaKnown RBP13.77□□□□□ -0.21
VCX3A-201ENST00000381089 IL12AP29459 219 aa13.77□□□□□ -0.21
VCX3A-201ENST00000381089 GLRXP35754 106 aa13.77□□□□□ -0.21
VCX3A-201ENST00000381089 TMEM33P57088 247 aa13.77□□□□□ -0.21
VCX3A-201ENST00000381089 MFSD13AQ14CX5 517 aa13.77□□□□□ -0.21
VCX3A-201ENST00000381089 RPS26P11Q5JNZ5 115 aaPredicted RBP13.77□□□□□ -0.21
VCX3A-201ENST00000381089 ELFN2Q5R3F8 820 aa13.77□□□□□ -0.21
VCX3A-201ENST00000381089 CLDND2Q8NHS1 167 aa13.77□□□□□ -0.21
VCX3A-201ENST00000381089 ZNF417Q8TAU3 575 aa13.77□□□□□ -0.21
VCX3A-201ENST00000381089 THOC1Q96FV9 657 aaKnown RBP13.77□□□□□ -0.21
VCX3A-201ENST00000381089 TMEM19Q96HH6 336 aa13.77□□□□□ -0.21
VCX3A-201ENST00000381089 LRRC37BQ96QE4 947 aa13.77□□□□□ -0.21
VCX3A-201ENST00000381089 ZNF587Q96SQ5 575 aaPredicted RBP13.77□□□□□ -0.21
VCX3A-201ENST00000381089 ZNF416Q9BWM5 594 aa13.77□□□□□ -0.21
VCX3A-201ENST00000381089 DENND2DQ9H6A0 471 aaPredicted RBP13.77□□□□□ -0.21
VCX3A-201ENST00000381089 NARFLQ9H6Q4 476 aa13.77□□□□□ -0.21
VCX3A-201ENST00000381089 TPT1P8Q9HAU6 139 aa13.77□□□□□ -0.21
VCX3A-201ENST00000381089 LPAR2Q9HBW0 351 aa13.77□□□□□ -0.21
VCX3A-201ENST00000381089 B3GAT1Q9P2W7 334 aa13.77□□□□□ -0.21
VCX3A-201ENST00000381089 ZNF346Q9UL40 294 aaKnown RBP13.77□□□□□ -0.21
VCX3A-201ENST00000381089 PCDHB10Q9UN67 800 aa13.77□□□□□ -0.21
VCX3A-201ENST00000381089 POFUT2Q9Y2G5 429 aa13.77□□□□□ -0.21
VCX3A-201ENST00000381089 DYSFO75923 2080 aa13.76□□□□□ -0.21
VCX3A-201ENST00000381089 TRAV36DV7A0A075B6V5 113 aa13.76□□□□□ -0.21
VCX3A-201ENST00000381089 TRAV20A0A0B4J274 112 aa13.76□□□□□ -0.21
VCX3A-201ENST00000381089 ZNF503-AS2A6NEH8 195 aa13.76□□□□□ -0.21
VCX3A-201ENST00000381089 TRPC5OSA6NMA1 111 aa13.76□□□□□ -0.21
VCX3A-201ENST00000381089 PPIHO43447 177 aaKnown RBP13.76□□□□□ -0.21
VCX3A-201ENST00000381089 SEC14L2O76054 403 aa13.76□□□□□ -0.21
VCX3A-201ENST00000381089 HLA-HP01893 362 aa13.76□□□□□ -0.21
VCX3A-201ENST00000381089 IGFBP1P08833 259 aaPredicted RBP13.76□□□□□ -0.21
VCX3A-201ENST00000381089 ZCCHC18P0CG32 403 aa13.76□□□□□ -0.21
VCX3A-201ENST00000381089 IDO1P14902 403 aa13.76□□□□□ -0.21
VCX3A-201ENST00000381089 GRPRP30550 384 aa13.76□□□□□ -0.21
VCX3A-201ENST00000381089 COMPP49747 757 aaPredicted RBP13.76□□□□□ -0.21
VCX3A-201ENST00000381089 MRPS11P82912 194 aaKnown RBP13.76□□□□□ -0.21
VCX3A-201ENST00000381089 EGR4Q05215 589 aa13.76□□□□□ -0.21
VCX3A-201ENST00000381089 SF3A3Q12874 501 aaKnown RBP eCLIP13.76□□□□□ -0.21
VCX3A-201ENST00000381089 CARD17Q5XLA6 110 aa13.76□□□□□ -0.21
VCX3A-201ENST00000381089 C6orf89Q6UWU4 347 aa13.76□□□□□ -0.21
VCX3A-201ENST00000381089 ZNF813Q6ZN06 617 aa13.76□□□□□ -0.21
VCX3A-201ENST00000381089 MAVSQ7Z434 540 aa13.76□□□□□ -0.21
VCX3A-201ENST00000381089 TMEM123Q8N131 208 aa13.76□□□□□ -0.21
VCX3A-201ENST00000381089 ADPRHL1Q8NDY3 354 aa13.76□□□□□ -0.21
VCX3A-201ENST00000381089 DNAJA4Q8WW22 397 aaPredicted RBP13.76□□□□□ -0.21
VCX3A-201ENST00000381089 ZNF837Q96EG3 531 aaPredicted RBP13.76□□□□□ -0.21
VCX3A-201ENST00000381089 ITCHQ96J02 903 aa13.76□□□□□ -0.21
VCX3A-201ENST00000381089 LRR1Q96L50 414 aa13.76□□□□□ -0.21
VCX3A-201ENST00000381089 SYT3Q9BQG1 590 aa13.76□□□□□ -0.21
VCX3A-201ENST00000381089 RBM4Q9BWF3 364 aaKnown RBP13.76□□□□□ -0.21
VCX3A-201ENST00000381089 RAD21L1Q9H4I0 556 aa13.76□□□□□ -0.21
VCX3A-201ENST00000381089 B3GNT2Q9NY97 397 aa13.76□□□□□ -0.21
VCX3A-201ENST00000381089 SELENONQ9NZV5 590 aa13.76□□□□□ -0.21
VCX3A-201ENST00000381089 SEC14L4Q9UDX3 406 aa13.76□□□□□ -0.21
VCX3A-201ENST00000381089 GPR160Q9UJ42 338 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms