RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 MT-ATP6P00846 226 aa8.14□□□□□ -1.11
HMGN1-202ENST00000380747 HIST1H2ABP04908 130 aa8.14□□□□□ -1.11
HMGN1-202ENST00000380747 THBDP07204 575 aa8.14□□□□□ -1.11
HMGN1-202ENST00000380747 THRBP10828 461 aa8.14□□□□□ -1.11
HMGN1-202ENST00000380747 HSD17B1P14061 328 aa8.14□□□□□ -1.11
HMGN1-202ENST00000380747 CRYGSP22914 178 aa8.14□□□□□ -1.11
HMGN1-202ENST00000380747 AHCYP23526 432 aa8.14□□□□□ -1.11
HMGN1-202ENST00000380747 RBM34P42696 430 aaKnown RBP8.14□□□□□ -1.11
HMGN1-202ENST00000380747 SELENOPP49908 381 aa8.14□□□□□ -1.11
HMGN1-202ENST00000380747 UGT2B15P54855 530 aa8.14□□□□□ -1.11
HMGN1-202ENST00000380747 ST3GAL3Q11203 375 aa8.14□□□□□ -1.11
HMGN1-202ENST00000380747 ZNF74Q16587 644 aa8.14□□□□□ -1.11
HMGN1-202ENST00000380747 TSPO2Q5TGU0 170 aa8.14□□□□□ -1.11
HMGN1-202ENST00000380747 C22orf34Q6ZV56 151 aa8.14□□□□□ -1.11
HMGN1-202ENST00000380747 HIST3H2AQ7L7L0 130 aa8.14□□□□□ -1.11
HMGN1-202ENST00000380747 TRPM8Q7Z2W7 1104 aa8.14□□□□□ -1.11
HMGN1-202ENST00000380747 CYP4Z1Q86W10 505 aa8.14□□□□□ -1.11
HMGN1-202ENST00000380747 CDC20BQ86Y33 519 aa8.14□□□□□ -1.11
HMGN1-202ENST00000380747 UEVLDQ8IX04 471 aa8.14□□□□□ -1.11
HMGN1-202ENST00000380747 SCAIQ8N9R8 606 aa8.14□□□□□ -1.11
HMGN1-202ENST00000380747 ADPRHL1Q8NDY3 354 aa8.14□□□□□ -1.11
HMGN1-202ENST00000380747 PFN4Q8NHR9 129 aa8.14□□□□□ -1.11
HMGN1-202ENST00000380747 TMEM239Q8WW34 195 aa8.14□□□□□ -1.11
HMGN1-202ENST00000380747 EDARADDQ8WWZ3 215 aa8.14□□□□□ -1.11
HMGN1-202ENST00000380747 HIST1H2ACQ93077 130 aa8.14□□□□□ -1.11
HMGN1-202ENST00000380747 SGTBQ96EQ0 304 aa8.14□□□□□ -1.11
HMGN1-202ENST00000380747 NSMCE2Q96MF7 247 aa8.14□□□□□ -1.11
HMGN1-202ENST00000380747 HS6ST2Q96MM7 605 aa8.14□□□□□ -1.11
HMGN1-202ENST00000380747 SLC19A3Q9BZV2 496 aa8.14□□□□□ -1.11
HMGN1-202ENST00000380747 OR10A4Q9H209 315 aa8.14□□□□□ -1.11
HMGN1-202ENST00000380747 SLCO5A1Q9H2Y9 848 aa8.14□□□□□ -1.11
HMGN1-202ENST00000380747 GORASP2Q9H8Y8 452 aa8.14□□□□□ -1.11
HMGN1-202ENST00000380747 NANSQ9NR45 359 aa8.14□□□□□ -1.11
HMGN1-202ENST00000380747 DLL4Q9NR61 685 aa8.14□□□□□ -1.11
HMGN1-202ENST00000380747 DCAF13Q9NV06 445 aaKnown RBP8.14□□□□□ -1.11
HMGN1-202ENST00000380747 MRPL39Q9NYK5 338 aaKnown RBP8.14□□□□□ -1.11
HMGN1-202ENST00000380747 B3GAT1Q9P2W7 334 aa8.14□□□□□ -1.11
HMGN1-202ENST00000380747 CD300AQ9UGN4 299 aa8.14□□□□□ -1.11
HMGN1-202ENST00000380747 A4GNTQ9UNA3 340 aa8.14□□□□□ -1.11
HMGN1-202ENST00000380747 MED31Q9Y3C7 131 aa8.14□□□□□ -1.11
HMGN1-202ENST00000380747 MS4A18H0YCH9 400 aa8.13□□□□□ -1.11
HMGN1-202ENST00000380747 hCG_2039718K7EN88 272 aa8.13□□□□□ -1.11
HMGN1-202ENST00000380747 PLPP3O14495 311 aa8.13□□□□□ -1.11
HMGN1-202ENST00000380747 ARPC2O15144 300 aa8.13□□□□□ -1.11
HMGN1-202ENST00000380747 AKAP8O43823 692 aaKnown RBP8.13□□□□□ -1.11
HMGN1-202ENST00000380747 PIP5K1CO60331 668 aa8.13□□□□□ -1.11
HMGN1-202ENST00000380747 FZD7O75084 574 aa8.13□□□□□ -1.11
HMGN1-202ENST00000380747 SLC43A1O75387 559 aa8.13□□□□□ -1.11
HMGN1-202ENST00000380747 PDE5AO76074 875 aa8.13□□□□□ -1.11
HMGN1-202ENST00000380747 OR7A10O76100 309 aa8.13□□□□□ -1.11
HMGN1-202ENST00000380747 GOSR1O95249 250 aa8.13□□□□□ -1.11
HMGN1-202ENST00000380747 HPRP00739 348 aa8.13□□□□□ -1.11
HMGN1-202ENST00000380747 MT-ND1P03886 318 aa8.13□□□□□ -1.11
HMGN1-202ENST00000380747 HRGP04196 525 aa8.13□□□□□ -1.11
HMGN1-202ENST00000380747 ADORA3P0DMS8 318 aa8.13□□□□□ -1.11
HMGN1-202ENST00000380747 T-ENOLP0DO92 83 aa8.13□□□□□ -1.11
HMGN1-202ENST00000380747 HLA-DOBP13765 273 aa8.13□□□□□ -1.11
HMGN1-202ENST00000380747 CDH2P19022 906 aaPredicted RBP8.13□□□□□ -1.11
HMGN1-202ENST00000380747 COX5AP20674 150 aa8.13□□□□□ -1.11
HMGN1-202ENST00000380747 IST1P53990 364 aa8.13□□□□□ -1.11
HMGN1-202ENST00000380747 FOXG1P55316 489 aaPredicted RBP8.13□□□□□ -1.11
HMGN1-202ENST00000380747 POU3F1Q03052 451 aaPredicted RBP8.13□□□□□ -1.11
HMGN1-202ENST00000380747 LGALS3BPQ08380 585 aa8.13□□□□□ -1.11
HMGN1-202ENST00000380747 PUDPQ08623 228 aa8.13□□□□□ -1.11
HMGN1-202ENST00000380747 TRAM2Q15035 370 aa8.13□□□□□ -1.11
HMGN1-202ENST00000380747 TAB1Q15750 504 aa8.13□□□□□ -1.11
HMGN1-202ENST00000380747 MS4A18Q3C1V0 323 aa8.13□□□□□ -1.11
HMGN1-202ENST00000380747 C20orf204Q6ZNR8 217 aa8.13□□□□□ -1.11
HMGN1-202ENST00000380747 NANOGNBQ7Z5D8 188 aa8.13□□□□□ -1.11
HMGN1-202ENST00000380747 OFCC1Q8IZS5 231 aa8.13□□□□□ -1.11
HMGN1-202ENST00000380747 LRRC17Q8N6Y2 441 aa8.13□□□□□ -1.11
HMGN1-202ENST00000380747 ZNF433Q8N7K0 673 aaPredicted RBP8.13□□□□□ -1.11
HMGN1-202ENST00000380747 FAM86B1Q8N7N1 296 aa8.13□□□□□ -1.11
HMGN1-202ENST00000380747 POMGNT2Q8NAT1 580 aa8.13□□□□□ -1.11
HMGN1-202ENST00000380747 OR5J2Q8NH18 312 aa8.13□□□□□ -1.11
HMGN1-202ENST00000380747 HSD17B8Q92506 261 aa8.13□□□□□ -1.11
HMGN1-202ENST00000380747 NRGNQ92686 78 aa8.13□□□□□ -1.11
HMGN1-202ENST00000380747 ZNF426Q9BUY5 554 aa8.13□□□□□ -1.11
HMGN1-202ENST00000380747 FKRPQ9H9S5 495 aa8.13□□□□□ -1.11
HMGN1-202ENST00000380747 MEPEQ9NQ76 525 aaPredicted RBP8.13□□□□□ -1.11
HMGN1-202ENST00000380747 TAS2R16Q9NYV7 291 aa8.13□□□□□ -1.11
HMGN1-202ENST00000380747 MALT1Q9UDY8 824 aa8.13□□□□□ -1.11
HMGN1-202ENST00000380747 ZNF229Q9UJW7 825 aa8.13□□□□□ -1.11
HMGN1-202ENST00000380747 FAM32AQ9Y421 112 aaKnown RBP8.13□□□□□ -1.11
HMGN1-202ENST00000380747 ENPP4Q9Y6X5 453 aa8.13□□□□□ -1.11
HMGN1-202ENST00000380747 CSPG4Q6UVK1 2322 aa8.13□□□□□ -1.11
HMGN1-202ENST00000380747 LOC102725191A0A1B0GVB3 256 aa8.12□□□□□ -1.11
HMGN1-202ENST00000380747 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.12□□□□□ -1.11
HMGN1-202ENST00000380747 OR6C65A6NJZ3 312 aa8.12□□□□□ -1.11
HMGN1-202ENST00000380747 ZNF726A6NNF4 738 aa8.12□□□□□ -1.11
HMGN1-202ENST00000380747 DEFB108AA8MXU0 73 aa8.12□□□□□ -1.11
HMGN1-202ENST00000380747 ZNF587BE7ETH6 402 aa8.12□□□□□ -1.11
HMGN1-202ENST00000380747 BLOC1S5-TXNDC5H3BN57 136 aa8.12□□□□□ -1.11
HMGN1-202ENST00000380747 FFAR1O14842 300 aa8.12□□□□□ -1.11
HMGN1-202ENST00000380747 RNF13O43567 381 aa8.12□□□□□ -1.11
HMGN1-202ENST00000380747 TRAF3IP2O43734 574 aaPredicted RBP8.12□□□□□ -1.11
HMGN1-202ENST00000380747 UPK3AO75631 287 aa8.12□□□□□ -1.11
HMGN1-202ENST00000380747 UBOX5O94941 541 aa8.12□□□□□ -1.11
HMGN1-202ENST00000380747 ITGA5P08648 1049 aa8.12□□□□□ -1.11
HMGN1-202ENST00000380747 IFI30P13284 250 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms