RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 H0YGG7 62 aa11.53□□□□□ -0.56
CHD3-203ENST00000380358 FBXO46Q6PJ61 603 aaPredicted RBP11.53□□□□□ -0.56
CHD3-203ENST00000380358 METAP1DQ6UB28 335 aaPredicted RBP11.53□□□□□ -0.56
CHD3-203ENST00000380358 PLPP5Q8NEB5 264 aa11.53□□□□□ -0.56
CHD3-203ENST00000380358 FAM71CQ8NEG0 241 aa11.53□□□□□ -0.56
CHD3-203ENST00000380358 OR7G3Q8NG95 312 aa11.53□□□□□ -0.56
CHD3-203ENST00000380358 OR1S2Q8NGQ3 325 aa11.53□□□□□ -0.56
CHD3-203ENST00000380358 FBXO17Q96EF6 278 aa11.53□□□□□ -0.56
CHD3-203ENST00000380358 RSRP1Q9BUV0 290 aa11.53□□□□□ -0.56
CHD3-203ENST00000380358 TUBB1Q9H4B7 451 aa11.53□□□□□ -0.56
CHD3-203ENST00000380358 ANKRD19PQ9H560 264 aa11.53□□□□□ -0.56
CHD3-203ENST00000380358 ZNF576Q9H609 170 aa11.53□□□□□ -0.56
CHD3-203ENST00000380358 ZFP57Q9NU63 452 aa11.53□□□□□ -0.56
CHD3-203ENST00000380358 SRPK3Q9UPE1 567 aa11.53□□□□□ -0.56
CHD3-203ENST00000380358 ROBO1Q9Y6N7 1651 aa11.53□□□□□ -0.56
CHD3-203ENST00000380358 EGFP01133 1207 aa11.53□□□□□ -0.56
CHD3-203ENST00000380358 GLB1P16278 677 aa11.53□□□□□ -0.56
CHD3-203ENST00000380358 DTYMKP23919 212 aa11.53□□□□□ -0.56
CHD3-203ENST00000380358 TAGLN2P37802 199 aaKnown RBP11.53□□□□□ -0.56
CHD3-203ENST00000380358 FOXA1P55317 472 aa11.53□□□□□ -0.56
CHD3-203ENST00000380358 SYPL1Q16563 259 aa11.53□□□□□ -0.56
CHD3-203ENST00000380358 LEXMQ3ZCV2 418 aa11.53□□□□□ -0.56
CHD3-203ENST00000380358 Q6ZRG5 221 aa11.53□□□□□ -0.56
CHD3-203ENST00000380358 GLCCI1Q86VQ1 547 aa11.53□□□□□ -0.56
CHD3-203ENST00000380358 ADGRG5Q8IZF4 528 aa11.53□□□□□ -0.56
CHD3-203ENST00000380358 ARSGQ96EG1 525 aa11.53□□□□□ -0.56
CHD3-203ENST00000380358 SPO11Q9Y5K1 396 aa11.53□□□□□ -0.56
CHD3-203ENST00000380358 PROZP22891 400 aa11.52□□□□□ -0.56
CHD3-203ENST00000380358 Q6ZTK2 550 aa11.52□□□□□ -0.56
CHD3-203ENST00000380358 OLIG3Q7RTU3 272 aa11.52□□□□□ -0.56
CHD3-203ENST00000380358 IFI44Q8TCB0 444 aa11.52□□□□□ -0.56
CHD3-203ENST00000380358 UCN3Q969E3 161 aa11.52□□□□□ -0.56
CHD3-203ENST00000380358 C1orf74Q96LT6 269 aa11.52□□□□□ -0.56
CHD3-203ENST00000380358 RCE1Q9Y256 329 aa11.52□□□□□ -0.56
CHD3-203ENST00000380358 ERCC6L2Q5T890 1561 aa11.52□□□□□ -0.56
CHD3-203ENST00000380358 MROH6A6NGR9 719 aa11.52□□□□□ -0.56
CHD3-203ENST00000380358 ZNF814B7Z6K7 855 aa11.52□□□□□ -0.56
CHD3-203ENST00000380358 F6UZH7 168 aa11.52□□□□□ -0.56
CHD3-203ENST00000380358 TMX2-CTNND1H3BSU7 103 aa11.52□□□□□ -0.56
CHD3-203ENST00000380358 SNRPBP14678 240 aaKnown RBP11.52□□□□□ -0.56
CHD3-203ENST00000380358 SPATA46Q5T0L3 261 aa11.52□□□□□ -0.56
CHD3-203ENST00000380358 PRR14Q9BWN1 585 aa11.52□□□□□ -0.56
CHD3-203ENST00000380358 PGAP2Q9UHJ9 254 aa11.52□□□□□ -0.56
CHD3-203ENST00000380358 PRSS21Q9Y6M0 314 aa11.52□□□□□ -0.56
CHD3-203ENST00000380358 GPR31O00270 319 aa11.52□□□□□ -0.57
CHD3-203ENST00000380358 NPC1O15118 1278 aa11.52□□□□□ -0.57
CHD3-203ENST00000380358 ZNF749O43361 778 aa11.52□□□□□ -0.57
CHD3-203ENST00000380358 KCNAB3O43448 404 aa11.52□□□□□ -0.57
CHD3-203ENST00000380358 GPR32O75388 356 aa11.52□□□□□ -0.57
CHD3-203ENST00000380358 AKR7A3O95154 331 aa11.52□□□□□ -0.57
CHD3-203ENST00000380358 PARS2Q7L3T8 475 aaKnown RBP11.52□□□□□ -0.57
CHD3-203ENST00000380358 FBXL16Q8N461 479 aa11.52□□□□□ -0.57
CHD3-203ENST00000380358 SLC15A4Q8N697 577 aa11.52□□□□□ -0.57
CHD3-203ENST00000380358 ATP13A2Q9NQ11 1180 aa11.52□□□□□ -0.57
CHD3-203ENST00000380358 ASCC3Q8N3C0 2202 aaKnown RBP11.52□□□□□ -0.57
CHD3-203ENST00000380358 NINQ8N4C6 2090 aa11.52□□□□□ -0.57
CHD3-203ENST00000380358 KLRC4-KLRK1H3BQV0 150 aa11.52□□□□□ -0.57
CHD3-203ENST00000380358 DNASE2O00115 360 aaPredicted RBP11.52□□□□□ -0.57
CHD3-203ENST00000380358 GATCO43716 136 aaKnown RBP11.52□□□□□ -0.57
CHD3-203ENST00000380358 PRKYO43930 277 aa11.52□□□□□ -0.57
CHD3-203ENST00000380358 CT45A10P0DMU9 189 aa11.52□□□□□ -0.57
CHD3-203ENST00000380358 ICAM2P13598 275 aa11.52□□□□□ -0.57
CHD3-203ENST00000380358 PCGF2P35227 344 aa11.52□□□□□ -0.57
CHD3-203ENST00000380358 CLDN8P56748 225 aa11.52□□□□□ -0.57
CHD3-203ENST00000380358 CCDC74BQ96LY2 380 aa11.52□□□□□ -0.57
CHD3-203ENST00000380358 ARRDC1-AS1Q9H2J1 176 aa11.52□□□□□ -0.57
CHD3-203ENST00000380358 ZNF334Q9HCZ1 680 aaPredicted RBP11.52□□□□□ -0.57
CHD3-203ENST00000380358 ACOT13Q9NPJ3 140 aa11.52□□□□□ -0.57
CHD3-203ENST00000380358 UBQLN4Q9NRR5 601 aa11.52□□□□□ -0.57
CHD3-203ENST00000380358 B3GAT1Q9P2W7 334 aa11.52□□□□□ -0.57
CHD3-203ENST00000380358 MRPL19P49406 292 aaKnown RBP11.52□□□□□ -0.57
CHD3-203ENST00000380358 MFAP5Q13361 173 aa11.52□□□□□ -0.57
CHD3-203ENST00000380358 IDO2Q6ZQW0 420 aa11.52□□□□□ -0.57
CHD3-203ENST00000380358 PLPP7Q8NBV4 271 aa11.52□□□□□ -0.57
CHD3-203ENST00000380358 GPR32P1Q8NGA4 272 aa11.52□□□□□ -0.57
CHD3-203ENST00000380358 MOB3AQ96BX8 217 aa11.52□□□□□ -0.57
CHD3-203ENST00000380358 C8orf44Q96CB5 159 aa11.52□□□□□ -0.57
CHD3-203ENST00000380358 CMBLQ96DG6 245 aa11.52□□□□□ -0.57
CHD3-203ENST00000380358 SMIM12Q96EX1 92 aa11.52□□□□□ -0.57
CHD3-203ENST00000380358 RNF170Q96K19 258 aa11.52□□□□□ -0.57
CHD3-203ENST00000380358 OR8B4Q96RC9 309 aa11.52□□□□□ -0.57
CHD3-203ENST00000380358 OR51J1Q9H342 316 aa11.52□□□□□ -0.57
CHD3-203ENST00000380358 OR52D1Q9H346 318 aa11.52□□□□□ -0.57
CHD3-203ENST00000380358 EPHX3Q9H6B9 360 aa11.52□□□□□ -0.57
CHD3-203ENST00000380358 AIG1Q9NVV5 245 aa11.52□□□□□ -0.57
CHD3-203ENST00000380358 DLC1Q96QB1 1528 aa11.52□□□□□ -0.57
CHD3-203ENST00000380358 CTSAP10619 480 aa11.52□□□□□ -0.57
CHD3-203ENST00000380358 GGT1P19440 569 aa11.52□□□□□ -0.57
CHD3-203ENST00000380358 HTR3AP46098 478 aa11.52□□□□□ -0.57
CHD3-203ENST00000380358 CYB561P49447 251 aa11.52□□□□□ -0.57
CHD3-203ENST00000380358 NPY4RP50391 375 aa11.52□□□□□ -0.57
CHD3-203ENST00000380358 MANEALQ5VSG8 457 aa11.52□□□□□ -0.57
CHD3-203ENST00000380358 LYPD8Q6UX82 237 aa11.52□□□□□ -0.57
CHD3-203ENST00000380358 C17orf107Q6ZR85 190 aa11.52□□□□□ -0.57
CHD3-203ENST00000380358 C19orf47Q8N9M1 422 aaKnown RBP11.52□□□□□ -0.57
CHD3-203ENST00000380358 SLC30A7Q8NEW0 376 aa11.52□□□□□ -0.57
CHD3-203ENST00000380358 ST8SIA4Q92187 359 aa11.52□□□□□ -0.57
CHD3-203ENST00000380358 ZNF587Q96SQ5 575 aaPredicted RBP11.52□□□□□ -0.57
CHD3-203ENST00000380358 BARHL1Q9BZE3 327 aa11.52□□□□□ -0.57
CHD3-203ENST00000380358 NDRG3Q9UGV2 375 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms