RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 ZNF229Q9UJW7 825 aa14.71□□□□□ -0.05
HMGN4-201ENST00000377575 A0A096LPE4 126 aa14.7□□□□□ -0.06
HMGN4-201ENST00000377575 A0A1W2PPZ6 126 aa14.7□□□□□ -0.06
HMGN4-201ENST00000377575 ZNF726A6NNF4 738 aa14.7□□□□□ -0.06
HMGN4-201ENST00000377575 FAM171A2A8MVW0 826 aa14.7□□□□□ -0.06
HMGN4-201ENST00000377575 OR5F1O95221 314 aa14.7□□□□□ -0.06
HMGN4-201ENST00000377575 CH25HO95992 272 aa14.7□□□□□ -0.06
HMGN4-201ENST00000377575 HLA-DOBP13765 273 aa14.7□□□□□ -0.06
HMGN4-201ENST00000377575 KDELR2P33947 212 aa14.7□□□□□ -0.06
HMGN4-201ENST00000377575 CDKN1AP38936 164 aa14.7□□□□□ -0.06
HMGN4-201ENST00000377575 RBM34P42696 430 aaKnown RBP14.7□□□□□ -0.06
HMGN4-201ENST00000377575 CEACAM16Q2WEN9 425 aa14.7□□□□□ -0.06
HMGN4-201ENST00000377575 CYBRD1Q53TN4 286 aa14.7□□□□□ -0.06
HMGN4-201ENST00000377575 TSPYL5Q86VY4 417 aaPredicted RBP14.7□□□□□ -0.06
HMGN4-201ENST00000377575 FBXL14Q8N1E6 418 aa14.7□□□□□ -0.06
HMGN4-201ENST00000377575 LZICQ8WZA0 190 aa14.7□□□□□ -0.06
HMGN4-201ENST00000377575 BCL2L2Q92843 193 aaPredicted RBP14.7□□□□□ -0.06
HMGN4-201ENST00000377575 TPD52L3Q96J77 140 aa14.7□□□□□ -0.06
HMGN4-201ENST00000377575 LRR1Q96L50 414 aa14.7□□□□□ -0.06
HMGN4-201ENST00000377575 SLC38A2Q96QD8 506 aa14.7□□□□□ -0.06
HMGN4-201ENST00000377575 HOPXQ9BPY8 73 aaPredicted RBP14.7□□□□□ -0.06
HMGN4-201ENST00000377575 ELAC2Q9BQ52 826 aaKnown RBP14.7□□□□□ -0.06
HMGN4-201ENST00000377575 EFCAB1Q9HAE3 211 aa14.7□□□□□ -0.06
HMGN4-201ENST00000377575 CRLF2Q9HC73 371 aa14.7□□□□□ -0.06
HMGN4-201ENST00000377575 MED29Q9NX70 200 aa14.7□□□□□ -0.06
HMGN4-201ENST00000377575 CMTM6Q9NX76 183 aa14.7□□□□□ -0.06
HMGN4-201ENST00000377575 SETD2Q9BYW2 2564 aaPredicted RBP14.7□□□□□ -0.06
HMGN4-201ENST00000377575 ZFHX3Q15911 3703 aa14.69□□□□□ -0.06
HMGN4-201ENST00000377575 ZNF99A8MXY4 864 aaPredicted RBP14.69□□□□□ -0.06
HMGN4-201ENST00000377575 E7EQL1 145 aa14.69□□□□□ -0.06
HMGN4-201ENST00000377575 C11orf98E9PRG8 122 aa14.69□□□□□ -0.06
HMGN4-201ENST00000377575 H7C1Q1 480 aa14.69□□□□□ -0.06
HMGN4-201ENST00000377575 M0R3G1 203 aa14.69□□□□□ -0.06
HMGN4-201ENST00000377575 NDUFAB1O14561 156 aa14.69□□□□□ -0.06
HMGN4-201ENST00000377575 SERPINI2O75830 405 aa14.69□□□□□ -0.06
HMGN4-201ENST00000377575 HIST1H2ABP04908 130 aa14.69□□□□□ -0.06
HMGN4-201ENST00000377575 UMPSP11172 480 aa14.69□□□□□ -0.06
HMGN4-201ENST00000377575 TNFRSF1BP20333 461 aa14.69□□□□□ -0.06
HMGN4-201ENST00000377575 TTKP33981 857 aa14.69□□□□□ -0.06
HMGN4-201ENST00000377575 NUDT2P50583 147 aa14.69□□□□□ -0.06
HMGN4-201ENST00000377575 C3orf36Q3SXR2 165 aa14.69□□□□□ -0.06
HMGN4-201ENST00000377575 CARD17Q5XLA6 110 aa14.69□□□□□ -0.06
HMGN4-201ENST00000377575 ZNF544Q6NX49 715 aa14.69□□□□□ -0.06
HMGN4-201ENST00000377575 HACD2Q6Y1H2 254 aa14.69□□□□□ -0.06
HMGN4-201ENST00000377575 HIST3H2AQ7L7L0 130 aa14.69□□□□□ -0.06
HMGN4-201ENST00000377575 NANOGNBQ7Z5D8 188 aa14.69□□□□□ -0.06
HMGN4-201ENST00000377575 C20orf196Q8IYI0 205 aa14.69□□□□□ -0.06
HMGN4-201ENST00000377575 MUC15Q8N387 334 aa14.69□□□□□ -0.06
HMGN4-201ENST00000377575 HIST1H2ACQ93077 130 aa14.69□□□□□ -0.06
HMGN4-201ENST00000377575 CMTM5Q96DZ9 223 aa14.69□□□□□ -0.06
HMGN4-201ENST00000377575 COX4I2Q96KJ9 171 aa14.69□□□□□ -0.06
HMGN4-201ENST00000377575 EMC6Q9BV81 110 aa14.69□□□□□ -0.06
HMGN4-201ENST00000377575 FAM107BQ9H098 131 aa14.69□□□□□ -0.06
HMGN4-201ENST00000377575 NELFAQ9H3P2 528 aa14.69□□□□□ -0.06
HMGN4-201ENST00000377575 CBLN4Q9NTU7 201 aa14.69□□□□□ -0.06
HMGN4-201ENST00000377575 ATP23Q9Y6H3 246 aa14.69□□□□□ -0.06
HMGN4-201ENST00000377575 SLC35F4A4IF30 521 aa14.68□□□□□ -0.06
HMGN4-201ENST00000377575 GSTA4O15217 222 aa14.68□□□□□ -0.06
HMGN4-201ENST00000377575 RNF13O43567 381 aa14.68□□□□□ -0.06
HMGN4-201ENST00000377575 THRBP10828 461 aa14.68□□□□□ -0.06
HMGN4-201ENST00000377575 IFNA8P32881 189 aa14.68□□□□□ -0.06
HMGN4-201ENST00000377575 OR1E2P47887 323 aa14.68□□□□□ -0.06
HMGN4-201ENST00000377575 FABP6P51161 128 aa14.68□□□□□ -0.06
HMGN4-201ENST00000377575 SLC7A2P52569 658 aa14.68□□□□□ -0.06
HMGN4-201ENST00000377575 SELENOWP63302 87 aa14.68□□□□□ -0.06
HMGN4-201ENST00000377575 ARF1P84077 181 aaKnown RBP14.68□□□□□ -0.06
HMGN4-201ENST00000377575 LIPEQ05469 1076 aa14.68□□□□□ -0.06
HMGN4-201ENST00000377575 ZP4Q12836 540 aa14.68□□□□□ -0.06
HMGN4-201ENST00000377575 B3GLCTQ6Y288 498 aa14.68□□□□□ -0.06
HMGN4-201ENST00000377575 TREML1Q86YW5 311 aa14.68□□□□□ -0.06
HMGN4-201ENST00000377575 SLC15A3Q8IY34 581 aa14.68□□□□□ -0.06
HMGN4-201ENST00000377575 CCDC36Q8IYA8 594 aa14.68□□□□□ -0.06
HMGN4-201ENST00000377575 OR6N1Q8NGY5 312 aa14.68□□□□□ -0.06
HMGN4-201ENST00000377575 ADAD1Q96M93 576 aaKnown RBP14.68□□□□□ -0.06
HMGN4-201ENST00000377575 HS6ST2Q96MM7 605 aa14.68□□□□□ -0.06
HMGN4-201ENST00000377575 PRSS27Q9BQR3 290 aa14.68□□□□□ -0.06
HMGN4-201ENST00000377575 KATNB1Q9BVA0 655 aa14.68□□□□□ -0.06
HMGN4-201ENST00000377575 ULBP2Q9BZM5 246 aa14.68□□□□□ -0.06
HMGN4-201ENST00000377575 BARX1Q9HBU1 254 aaPredicted RBP14.68□□□□□ -0.06
HMGN4-201ENST00000377575 CRNNQ9UBG3 495 aaPredicted RBP14.68□□□□□ -0.06
HMGN4-201ENST00000377575 RIMS3Q9UJD0 308 aa14.68□□□□□ -0.06
HMGN4-201ENST00000377575 IGHV1-18A0A0C4DH31 117 aa14.67□□□□□ -0.06
HMGN4-201ENST00000377575 TRIM64A6NGJ6 449 aa14.67□□□□□ -0.06
HMGN4-201ENST00000377575 TRIM64BA6NI03 449 aa14.67□□□□□ -0.06
HMGN4-201ENST00000377575 ATP6V1G2-DDX39BF2Z307 99 aa14.67□□□□□ -0.06
HMGN4-201ENST00000377575 NME4O00746 187 aa14.67□□□□□ -0.06
HMGN4-201ENST00000377575 SHOX2O60902 331 aaPredicted RBP14.67□□□□□ -0.06
HMGN4-201ENST00000377575 IGF2P01344 180 aa14.67□□□□□ -0.06
HMGN4-201ENST00000377575 CD8AP01732 235 aa14.67□□□□□ -0.06
HMGN4-201ENST00000377575 CRYAAP02489 173 aa14.67□□□□□ -0.06
HMGN4-201ENST00000377575 MT-ND1P03886 318 aa14.67□□□□□ -0.06
HMGN4-201ENST00000377575 ASAH2BP0C7U1 165 aa14.67□□□□□ -0.06
HMGN4-201ENST00000377575 IFNGR1P15260 489 aa14.67□□□□□ -0.06
HMGN4-201ENST00000377575 LSP1P33241 339 aa14.67□□□□□ -0.06
HMGN4-201ENST00000377575 CSNK1A1P48729 337 aa14.67□□□□□ -0.06
HMGN4-201ENST00000377575 SEC24CP53992 1094 aa14.67□□□□□ -0.06
HMGN4-201ENST00000377575 BIDP55957 195 aa14.67□□□□□ -0.06
HMGN4-201ENST00000377575 PIN1Q13526 163 aaPredicted RBP14.67□□□□□ -0.06
HMGN4-201ENST00000377575 CAMK2DQ13557 499 aa14.67□□□□□ -0.06
HMGN4-201ENST00000377575 SLC35D2Q76EJ3 337 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms