RNA–Protein interactions for RNA: ENST00000377561.6

CNTNAP3B-203, Transcript of contactin associated protein like 3B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 5,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-203ENST00000377561 ZNF529Q6P280 563 aa17.26■□□□□ 0.35
CNTNAP3B-203ENST00000377561 OR6V1Q8N148 313 aa17.26■□□□□ 0.35
CNTNAP3B-203ENST00000377561 SLC23A2Q9UGH3 650 aa17.26■□□□□ 0.35
CNTNAP3B-203ENST00000377561 PCDHB10Q9UN67 800 aa17.26■□□□□ 0.35
CNTNAP3B-203ENST00000377561 TCTN3Q6NUS6 607 aa17.26■□□□□ 0.35
CNTNAP3B-203ENST00000377561 CD300LGQ6UXG3 332 aa17.26■□□□□ 0.35
CNTNAP3B-203ENST00000377561 MEX3BQ6ZN04 569 aaKnown RBP17.26■□□□□ 0.35
CNTNAP3B-203ENST00000377561 OR5L1Q8NGL2 311 aa17.26■□□□□ 0.35
CNTNAP3B-203ENST00000377561 ZNF225Q9UK10 706 aa17.26■□□□□ 0.35
CNTNAP3B-203ENST00000377561 SCN1AP35498 2009 aa17.25■□□□□ 0.35
CNTNAP3B-203ENST00000377561 NSG1A0A0A6YYJ2 146 aa17.25■□□□□ 0.35
CNTNAP3B-203ENST00000377561 CHRM4P08173 479 aa17.25■□□□□ 0.35
CNTNAP3B-203ENST00000377561 BDKRB2P30411 391 aa17.25■□□□□ 0.35
CNTNAP3B-203ENST00000377561 RAP2BP61225 183 aa17.25■□□□□ 0.35
CNTNAP3B-203ENST00000377561 SEC61A1P61619 476 aaKnown RBP17.25■□□□□ 0.35
CNTNAP3B-203ENST00000377561 SLC22A6Q4U2R8 563 aa17.25■□□□□ 0.35
CNTNAP3B-203ENST00000377561 ACSM5Q6NUN0 579 aa17.25■□□□□ 0.35
CNTNAP3B-203ENST00000377561 CALHM3Q86XJ0 350 aa17.25■□□□□ 0.35
CNTNAP3B-203ENST00000377561 SENP5Q96HI0 755 aaPredicted RBP17.25■□□□□ 0.35
CNTNAP3B-203ENST00000377561 SLC6A18Q96N87 628 aa17.25■□□□□ 0.35
CNTNAP3B-203ENST00000377561 NOX4Q9NPH5 578 aa17.25■□□□□ 0.35
CNTNAP3B-203ENST00000377561 ATP13A2Q9NQ11 1180 aa17.25■□□□□ 0.35
CNTNAP3B-203ENST00000377561 FBXO8Q9NRD0 319 aa17.25■□□□□ 0.35
CNTNAP3B-203ENST00000377561 OSGIN1Q9UJX0 560 aa17.25■□□□□ 0.35
CNTNAP3B-203ENST00000377561 CAMK2AQ9UQM7 478 aa17.25■□□□□ 0.35
CNTNAP3B-203ENST00000377561 ASPDHA6ND91 283 aa17.25■□□□□ 0.35
CNTNAP3B-203ENST00000377561 POM121BA6NF01 834 aa17.25■□□□□ 0.35
CNTNAP3B-203ENST00000377561 PTBP1P26599 531 aaKnown RBP eCLIP17.25■□□□□ 0.35
CNTNAP3B-203ENST00000377561 SLC19A1P41440 591 aa17.25■□□□□ 0.35
CNTNAP3B-203ENST00000377561 CX3CR1P49238 355 aa17.25■□□□□ 0.35
CNTNAP3B-203ENST00000377561 C17orf67Q0P5P2 114 aa17.25■□□□□ 0.35
CNTNAP3B-203ENST00000377561 ZMAT1Q5H9K5 638 aa17.25■□□□□ 0.35
CNTNAP3B-203ENST00000377561 ASTLQ6HA08 431 aaPredicted RBP17.25■□□□□ 0.35
CNTNAP3B-203ENST00000377561 NIPAL3Q6P499 406 aa17.25■□□□□ 0.35
CNTNAP3B-203ENST00000377561 CNEP1R1Q8N9A8 125 aa17.25■□□□□ 0.35
CNTNAP3B-203ENST00000377561 STK35Q8TDR2 534 aa17.25■□□□□ 0.35
CNTNAP3B-203ENST00000377561 NUDT22Q9BRQ3 303 aa17.25■□□□□ 0.35
CNTNAP3B-203ENST00000377561 FGF21Q9NSA1 209 aa17.25■□□□□ 0.35
CNTNAP3B-203ENST00000377561 FRMD1Q8N878 549 aa17.25■□□□□ 0.35
CNTNAP3B-203ENST00000377561 NICN1Q9BSH3 213 aa17.25■□□□□ 0.35
CNTNAP3B-203ENST00000377561 C1orf198Q9H425 327 aa17.25■□□□□ 0.35
CNTNAP3B-203ENST00000377561 NTN4Q9HB63 628 aa17.25■□□□□ 0.35
CNTNAP3B-203ENST00000377561 H0Y8X5 98 aa17.25■□□□□ 0.35
CNTNAP3B-203ENST00000377561 CER1O95813 267 aa17.25■□□□□ 0.35
CNTNAP3B-203ENST00000377561 IGFBP1P08833 259 aaPredicted RBP17.25■□□□□ 0.35
CNTNAP3B-203ENST00000377561 PTPN6P29350 595 aa17.25■□□□□ 0.35
CNTNAP3B-203ENST00000377561 ALDH3B1P43353 468 aa17.25■□□□□ 0.35
CNTNAP3B-203ENST00000377561 ALKBH1Q13686 389 aaKnown RBP17.25■□□□□ 0.35
CNTNAP3B-203ENST00000377561 RBMS2Q15434 407 aaKnown RBP17.25■□□□□ 0.35
CNTNAP3B-203ENST00000377561 RTL6Q6ICC9 239 aa17.25■□□□□ 0.35
CNTNAP3B-203ENST00000377561 FNDC9Q8TBE3 224 aa17.25■□□□□ 0.35
CNTNAP3B-203ENST00000377561 TEAD3Q99594 435 aa17.25■□□□□ 0.35
CNTNAP3B-203ENST00000377561 NPFFR2Q9Y5X5 522 aa17.25■□□□□ 0.35
CNTNAP3B-203ENST00000377561 C2orf72A6NCS6 295 aa17.25■□□□□ 0.35
CNTNAP3B-203ENST00000377561 GLCEO94923 617 aa17.25■□□□□ 0.35
CNTNAP3B-203ENST00000377561 CHRNB1P11230 501 aa17.25■□□□□ 0.35
CNTNAP3B-203ENST00000377561 BMP1P13497 986 aa17.25■□□□□ 0.35
CNTNAP3B-203ENST00000377561 ZNF620Q6ZNG0 422 aa17.25■□□□□ 0.35
CNTNAP3B-203ENST00000377561 CD163Q86VB7 1156 aa17.25■□□□□ 0.35
CNTNAP3B-203ENST00000377561 BPIFB2Q8N4F0 458 aa17.25■□□□□ 0.35
CNTNAP3B-203ENST00000377561 ACBD4Q8NC06 268 aa17.25■□□□□ 0.35
CNTNAP3B-203ENST00000377561 ASF1BQ9NVP2 202 aa17.25■□□□□ 0.35
CNTNAP3B-203ENST00000377561 CORINQ9Y5Q5 1042 aa17.25■□□□□ 0.35
CNTNAP3B-203ENST00000377561 RRAS2P62070 204 aaPredicted RBP17.24■□□□□ 0.35
CNTNAP3B-203ENST00000377561 DUSP8Q13202 625 aa17.24■□□□□ 0.35
CNTNAP3B-203ENST00000377561 CAMK2DQ13557 499 aa17.24■□□□□ 0.35
CNTNAP3B-203ENST00000377561 MKXQ8IYA7 352 aa17.24■□□□□ 0.35
CNTNAP3B-203ENST00000377561 FAM109AQ8N4B1 249 aa17.24■□□□□ 0.35
CNTNAP3B-203ENST00000377561 OR4M1Q8NGD0 313 aa17.24■□□□□ 0.35
CNTNAP3B-203ENST00000377561 ARL11Q969Q4 196 aa17.24■□□□□ 0.35
CNTNAP3B-203ENST00000377561 GPR160Q9UJ42 338 aa17.24■□□□□ 0.35
CNTNAP3B-203ENST00000377561 PCBD1P61457 104 aa17.24■□□□□ 0.35
CNTNAP3B-203ENST00000377561 RACK1P63244 317 aaKnown RBP17.24■□□□□ 0.35
CNTNAP3B-203ENST00000377561 MLF2Q15773 248 aaPredicted RBP17.24■□□□□ 0.35
CNTNAP3B-203ENST00000377561 PLCXD3Q63HM9 321 aa17.24■□□□□ 0.35
CNTNAP3B-203ENST00000377561 ZNF511Q8NB15 262 aa17.24■□□□□ 0.35
CNTNAP3B-203ENST00000377561 STEAP2Q8NFT2 490 aa17.24■□□□□ 0.35
CNTNAP3B-203ENST00000377561 VN1R3Q9BXE9 311 aa17.24■□□□□ 0.35
CNTNAP3B-203ENST00000377561 NDUFB11Q9NX14 153 aa17.24■□□□□ 0.35
CNTNAP3B-203ENST00000377561 PPIL1Q9Y3C6 166 aa17.24■□□□□ 0.35
CNTNAP3B-203ENST00000377561 ZNF44P15621 663 aa17.24■□□□□ 0.35
CNTNAP3B-203ENST00000377561 HYAL4Q2M3T9 481 aa17.24■□□□□ 0.35
CNTNAP3B-203ENST00000377561 GCM1Q9NP62 436 aa17.24■□□□□ 0.35
CNTNAP3B-203ENST00000377561 GHRLQ9UBU3 117 aa17.24■□□□□ 0.35
CNTNAP3B-203ENST00000377561 CD53P19397 219 aa17.24■□□□□ 0.35
CNTNAP3B-203ENST00000377561 CD27P26842 260 aa17.24■□□□□ 0.35
CNTNAP3B-203ENST00000377561 AFF3P51826 1226 aaKnown RBP17.24■□□□□ 0.35
CNTNAP3B-203ENST00000377561 DCDP81605 110 aaKnown RBP17.24■□□□□ 0.35
CNTNAP3B-203ENST00000377561 DYNC2LI1Q8TCX1 351 aa17.24■□□□□ 0.35
CNTNAP3B-203ENST00000377561 MALSU1Q96EH3 234 aa17.24■□□□□ 0.35
CNTNAP3B-203ENST00000377561 ULBP2Q9BZM5 246 aa17.24■□□□□ 0.35
CNTNAP3B-203ENST00000377561 OR51B4Q9Y5P0 310 aa17.24■□□□□ 0.35
CNTNAP3B-203ENST00000377561 HTR2CP28335 458 aa17.23■□□□□ 0.35
CNTNAP3B-203ENST00000377561 SMAD2Q15796 467 aaKnown RBP17.23■□□□□ 0.35
CNTNAP3B-203ENST00000377561 TMEM176BQ3YBM2 270 aaPredicted RBP17.23■□□□□ 0.35
CNTNAP3B-203ENST00000377561 NKAIN2Q5VXU1 208 aa17.23■□□□□ 0.35
CNTNAP3B-203ENST00000377561 ETV7Q9Y603 341 aa17.23■□□□□ 0.35
CNTNAP3B-203ENST00000377561 IGLV3-16A0A075B6K0 115 aa17.23■□□□□ 0.35
CNTNAP3B-203ENST00000377561 B4DXG7 233 aa17.23■□□□□ 0.35
CNTNAP3B-203ENST00000377561 D6RAR5 112 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms