RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 HENMT1Q5T8I9 393 aaKnown RBP10.84□□□□□ -0.67
VPS13A-205ENST00000376636 RETREG3Q86VR2 466 aa10.84□□□□□ -0.67
VPS13A-205ENST00000376636 DTWD1Q8N5C7 304 aa10.84□□□□□ -0.67
VPS13A-205ENST00000376636 HSD17B11Q8NBQ5 300 aa10.84□□□□□ -0.67
VPS13A-205ENST00000376636 MAN2B1O00754 1011 aa10.84□□□□□ -0.67
VPS13A-205ENST00000376636 AQP7O14520 342 aa10.84□□□□□ -0.67
VPS13A-205ENST00000376636 SOCS6O14544 535 aa10.84□□□□□ -0.67
VPS13A-205ENST00000376636 NXPH2O95156 264 aa10.84□□□□□ -0.67
VPS13A-205ENST00000376636 HTR5AP47898 357 aa10.84□□□□□ -0.67
VPS13A-205ENST00000376636 ZNF321PQ8N8H1 164 aa10.84□□□□□ -0.67
VPS13A-205ENST00000376636 ELOVL3Q9HB03 270 aa10.84□□□□□ -0.67
VPS13A-205ENST00000376636 SDR39U1Q9NRG7 319 aaPredicted RBP10.84□□□□□ -0.67
VPS13A-205ENST00000376636 ENTPD2Q9Y5L3 495 aa10.84□□□□□ -0.67
VPS13A-205ENST00000376636 SCN9AQ15858 1988 aa10.84□□□□□ -0.67
VPS13A-205ENST00000376636 LOC100289279A0A1B0GTE1 492 aa10.84□□□□□ -0.67
VPS13A-205ENST00000376636 ZNF724A8MTY0 619 aa10.84□□□□□ -0.67
VPS13A-205ENST00000376636 ZNF217O75362 1048 aa10.84□□□□□ -0.67
VPS13A-205ENST00000376636 EMX1Q04741 257 aaPredicted RBP10.84□□□□□ -0.67
VPS13A-205ENST00000376636 MBTPS1Q14703 1052 aa10.84□□□□□ -0.67
VPS13A-205ENST00000376636 CPZQ66K79 652 aa10.84□□□□□ -0.67
VPS13A-205ENST00000376636 INPP5KQ9BT40 448 aa10.84□□□□□ -0.67
VPS13A-205ENST00000376636 FBXO8Q9NRD0 319 aa10.84□□□□□ -0.67
VPS13A-205ENST00000376636 SRPK3Q9UPE1 567 aa10.84□□□□□ -0.67
VPS13A-205ENST00000376636 TMEM184BQ9Y519 407 aaPredicted RBP10.84□□□□□ -0.67
VPS13A-205ENST00000376636 TMX2-CTNND1H3BSU7 103 aa10.84□□□□□ -0.67
VPS13A-205ENST00000376636 TGM1P22735 817 aa10.84□□□□□ -0.67
VPS13A-205ENST00000376636 SLC16A14Q7RTX9 510 aa10.84□□□□□ -0.67
VPS13A-205ENST00000376636 ZNF443Q9Y2A4 671 aaPredicted RBP10.84□□□□□ -0.67
VPS13A-205ENST00000376636 SLC9B1P1A6NJY1 282 aa10.83□□□□□ -0.67
VPS13A-205ENST00000376636 IL1RNP18510 177 aa10.83□□□□□ -0.67
VPS13A-205ENST00000376636 OPN5Q6U736 354 aa10.83□□□□□ -0.67
VPS13A-205ENST00000376636 RELL2Q8NC24 303 aaPredicted RBP10.83□□□□□ -0.67
VPS13A-205ENST00000376636 OR6K3Q8NGY3 331 aa10.83□□□□□ -0.67
VPS13A-205ENST00000376636 C2CD4CQ8TF44 421 aa10.83□□□□□ -0.67
VPS13A-205ENST00000376636 MBOAT4Q96T53 435 aa10.83□□□□□ -0.67
VPS13A-205ENST00000376636 OR2F2O95006 317 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 SCG5P05408 212 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 PTBP1P26599 531 aaKnown RBP eCLIP10.83□□□□□ -0.683e-7■■■■■ 27.3
VPS13A-205ENST00000376636 OR2F1Q13607 317 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 RABEPKQ7Z6M1 372 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 THNSL2Q86YJ6 484 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 FAM234AQ9H0X4 552 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 OR52D1Q9H346 318 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 DNAJC15Q9Y5T4 150 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 MRPL33O75394 65 aaKnown RBP10.83□□□□□ -0.68
VPS13A-205ENST00000376636 POU3F1Q03052 451 aaPredicted RBP10.83□□□□□ -0.68
VPS13A-205ENST00000376636 FXNQ16595 210 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 IAH1Q2TAA2 248 aaPredicted RBP10.83□□□□□ -0.68
VPS13A-205ENST00000376636 LY6G5CQ5SRR4 150 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 ADAM5Q6NVV9 412 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 TMPRSS11FQ6ZWK6 438 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 BOD1Q96IK1 185 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 MRGPRX2Q96LB1 330 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 CXXC1Q9P0U4 656 aaPredicted RBP10.83□□□□□ -0.68
VPS13A-205ENST00000376636 GABRQQ9UN88 632 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 AKAP12Q02952 1782 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 FAM24AA6NFZ4 105 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 K7ERQ8 282 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 RNGTTO60942 597 aaKnown RBP10.83□□□□□ -0.68
VPS13A-205ENST00000376636 GPR32O75388 356 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 SIX6O95475 246 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 VWA1Q6PCB0 445 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 GRASPQ7Z6J2 395 aaPredicted RBP10.83□□□□□ -0.68
VPS13A-205ENST00000376636 MFSD6LQ8IWD5 586 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 CLECL1Q8IZS7 167 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 ANKRD36CQ5JPF3 1778 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 OR2T7P0C7T2 308 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 CD276Q5ZPR3 534 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 LAX1Q8IWV1 398 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 PHYHIPQ92561 330 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 KCMF1Q9P0J7 381 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 SFXN4Q6P4A7 337 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 B3GNT8Q7Z7M8 397 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 ULBP2Q9BZM5 246 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 SIX2Q9NPC8 291 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 ACOXLQ9NUZ1 547 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 IFT172Q9UG01 1749 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 OLIG2Q13516 323 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 Q499Y3 187 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 OR51A2Q8NGJ7 313 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 LGALS14Q8TCE9 139 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 ALOXE3Q9BYJ1 711 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 TMEM221A6NGB7 291 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 KDM4EB2RXH2 506 aaPredicted RBP10.83□□□□□ -0.68
VPS13A-205ENST00000376636 E5RGE8 158 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 SH3BP2P78314 561 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 CEBPEQ15744 281 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 ACOT6Q3I5F7 207 aaPredicted RBP10.83□□□□□ -0.68
VPS13A-205ENST00000376636 PLK5Q496M5 336 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 TEX261Q6UWH6 196 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 TMUB2Q71RG4 321 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 NRARPQ7Z6K4 114 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 LGI3Q8N145 548 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 C11orf42Q8N5U0 333 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 UCN3Q969E3 161 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 DNMT3BQ9UBC3 853 aaKnown RBP10.83□□□□□ -0.68
VPS13A-205ENST00000376636 U3KQ87 197 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 ANKRD31Q8N7Z5 1873 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 A0A1W2PP55 124 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 ACSM4P0C7M7 580 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms