RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 A0A1B0GVT2 93 aa12.73□□□□□ -0.37
MSH5-202ENST00000375740 TCRBV16S1A1N1A0A5B0 115 aa12.73□□□□□ -0.37
MSH5-202ENST00000375740 SLC22A23A1A5C7 686 aa12.73□□□□□ -0.37
MSH5-202ENST00000375740 ELOA3DA6NLF2 546 aaPredicted RBP12.73□□□□□ -0.37
MSH5-202ENST00000375740 SIGLEC5O15389 551 aa12.73□□□□□ -0.37
MSH5-202ENST00000375740 DUX1O43812 170 aa12.73□□□□□ -0.37
MSH5-202ENST00000375740 CSF2RBP32927 897 aa12.73□□□□□ -0.37
MSH5-202ENST00000375740 CCR6P51684 374 aa12.73□□□□□ -0.37
MSH5-202ENST00000375740 AFF3P51826 1226 aaKnown RBP12.73□□□□□ -0.37
MSH5-202ENST00000375740 SIGLEC14Q08ET2 396 aa12.73□□□□□ -0.37
MSH5-202ENST00000375740 SKP2Q13309 424 aa12.73□□□□□ -0.37
MSH5-202ENST00000375740 ELOA3BQ3SY89 546 aa12.73□□□□□ -0.37
MSH5-202ENST00000375740 RPTNQ6XPR3 784 aa12.73□□□□□ -0.37
MSH5-202ENST00000375740 PRSS58Q8IYP2 241 aa12.73□□□□□ -0.37
MSH5-202ENST00000375740 D2HGDHQ8N465 521 aa12.73□□□□□ -0.37
MSH5-202ENST00000375740 RFLNBQ8N5W9 214 aa12.73□□□□□ -0.37
MSH5-202ENST00000375740 ELOA3Q8NG57 546 aa12.73□□□□□ -0.37
MSH5-202ENST00000375740 ZNRF4Q8WWF5 429 aa12.73□□□□□ -0.37
MSH5-202ENST00000375740 ADIPOR1Q96A54 375 aa12.73□□□□□ -0.37
MSH5-202ENST00000375740 ZNF524Q96C55 264 aa12.73□□□□□ -0.37
MSH5-202ENST00000375740 NXPE2Q96DL1 559 aa12.73□□□□□ -0.37
MSH5-202ENST00000375740 MVB12AQ96EY5 273 aa12.73□□□□□ -0.37
MSH5-202ENST00000375740 ADOQ96SZ5 270 aa12.73□□□□□ -0.37
MSH5-202ENST00000375740 NUDT9Q9BW91 350 aa12.73□□□□□ -0.37
MSH5-202ENST00000375740 TTTY10Q9BZA0 68 aa12.73□□□□□ -0.37
MSH5-202ENST00000375740 ZNF304Q9HCX3 659 aa12.73□□□□□ -0.37
MSH5-202ENST00000375740 HRH3Q9Y5N1 445 aa12.73□□□□□ -0.37
MSH5-202ENST00000375740 TP53BP1Q12888 1972 aaPredicted RBP12.73□□□□□ -0.37
MSH5-202ENST00000375740 IMPA2O14732 288 aa12.73□□□□□ -0.37
MSH5-202ENST00000375740 MAGEB4O15481 346 aaPredicted RBP12.73□□□□□ -0.37
MSH5-202ENST00000375740 PLPP2O43688 288 aa12.73□□□□□ -0.37
MSH5-202ENST00000375740 IGKV3-11P04433 115 aa12.73□□□□□ -0.37
MSH5-202ENST00000375740 EIF4EP06730 217 aaKnown RBP12.73□□□□□ -0.37
MSH5-202ENST00000375740 ZP3P21754 424 aa12.73□□□□□ -0.37
MSH5-202ENST00000375740 NUP62P37198 522 aaPredicted RBP12.73□□□□□ -0.37
MSH5-202ENST00000375740 SELENOPP49908 381 aa12.73□□□□□ -0.37
MSH5-202ENST00000375740 ZP1P60852 638 aa12.73□□□□□ -0.37
MSH5-202ENST00000375740 ERVK-25P63136 954 aa12.73□□□□□ -0.37
MSH5-202ENST00000375740 POU4F2Q12837 409 aa12.73□□□□□ -0.37
MSH5-202ENST00000375740 BAMBIQ13145 260 aa12.73□□□□□ -0.37
MSH5-202ENST00000375740 IDNKQ5T6J7 187 aa12.73□□□□□ -0.37
MSH5-202ENST00000375740 ATRAIDQ6UW56 229 aa12.73□□□□□ -0.37
MSH5-202ENST00000375740 LUZP2Q86TE4 346 aa12.73□□□□□ -0.37
MSH5-202ENST00000375740 ATG4DQ86TL0 474 aaPredicted RBP12.73□□□□□ -0.37
MSH5-202ENST00000375740 SLITRK4Q8IW52 837 aa12.73□□□□□ -0.37
MSH5-202ENST00000375740 ABHD4Q8TB40 342 aa12.73□□□□□ -0.37
MSH5-202ENST00000375740 GAL3ST4Q96RP7 486 aa12.73□□□□□ -0.37
MSH5-202ENST00000375740 ABHD1Q96SE0 405 aa12.73□□□□□ -0.37
MSH5-202ENST00000375740 NMNAT3Q96T66 252 aa12.73□□□□□ -0.37
MSH5-202ENST00000375740 KLHDC3Q9BQ90 382 aa12.73□□□□□ -0.37
MSH5-202ENST00000375740 NRSN2Q9GZP1 204 aa12.73□□□□□ -0.37
MSH5-202ENST00000375740 KLHL1Q9NR64 748 aa12.73□□□□□ -0.37
MSH5-202ENST00000375740 ENAMQ9NRM1 1142 aa12.73□□□□□ -0.37
MSH5-202ENST00000375740 MAB21L2Q9Y586 359 aa12.73□□□□□ -0.37
MSH5-202ENST00000375740 CACNG2Q9Y698 323 aa12.73□□□□□ -0.37
MSH5-202ENST00000375740 SDK1Q7Z5N4 2213 aa12.72□□□□□ -0.37
MSH5-202ENST00000375740 TMEM265A0A087WTH1 108 aa12.72□□□□□ -0.37
MSH5-202ENST00000375740 CDC14CA4D256 554 aa12.72□□□□□ -0.37
MSH5-202ENST00000375740 LINC01387J3KSC0 135 aa12.72□□□□□ -0.37
MSH5-202ENST00000375740 ZNF264O43296 627 aa12.72□□□□□ -0.37
MSH5-202ENST00000375740 TFP02787 698 aa12.72□□□□□ -0.37
MSH5-202ENST00000375740 GIMD1P0DJR0 217 aa12.72□□□□□ -0.37
MSH5-202ENST00000375740 GLB1P16278 677 aa12.72□□□□□ -0.37
MSH5-202ENST00000375740 GIFP27352 417 aa12.72□□□□□ -0.37
MSH5-202ENST00000375740 SHC1P29353 583 aa12.72□□□□□ -0.37
MSH5-202ENST00000375740 ACVR1BP36896 505 aa12.72□□□□□ -0.37
MSH5-202ENST00000375740 ACTC1P68032 377 aa12.72□□□□□ -0.37
MSH5-202ENST00000375740 ACTA1P68133 377 aa12.72□□□□□ -0.37
MSH5-202ENST00000375740 ZP2Q05996 745 aa12.72□□□□□ -0.37
MSH5-202ENST00000375740 DMWDQ09019 674 aa12.72□□□□□ -0.37
MSH5-202ENST00000375740 C1orf189Q5VU69 101 aa12.72□□□□□ -0.37
MSH5-202ENST00000375740 HDDC2Q7Z4H3 204 aa12.72□□□□□ -0.37
MSH5-202ENST00000375740 FTMTQ8N4E7 242 aa12.72□□□□□ -0.37
MSH5-202ENST00000375740 NPEPL1Q8NDH3 523 aa12.72□□□□□ -0.37
MSH5-202ENST00000375740 C17orf47Q8NEP4 570 aa12.72□□□□□ -0.37
MSH5-202ENST00000375740 OR2T4Q8NH00 348 aa12.72□□□□□ -0.37
MSH5-202ENST00000375740 OR5J2Q8NH18 312 aa12.72□□□□□ -0.37
MSH5-202ENST00000375740 MOSPD2Q8NHP6 518 aa12.72□□□□□ -0.37
MSH5-202ENST00000375740 RFT1Q96AA3 541 aa12.72□□□□□ -0.37
MSH5-202ENST00000375740 SLC19A3Q9BZV2 496 aa12.72□□□□□ -0.37
MSH5-202ENST00000375740 NRIP3Q9NQ35 241 aa12.72□□□□□ -0.37
MSH5-202ENST00000375740 EML5Q05BV3 1969 aa12.72□□□□□ -0.37
MSH5-202ENST00000375740 UNC13CQ8NB66 2214 aa12.72□□□□□ -0.37
MSH5-202ENST00000375740 ASXL3Q9C0F0 2248 aa12.72□□□□□ -0.37
MSH5-202ENST00000375740 MFSD2BA6NFX1 497 aa12.72□□□□□ -0.37
MSH5-202ENST00000375740 FRG2CA6NGY1 282 aa12.72□□□□□ -0.37
MSH5-202ENST00000375740 HPXP02790 462 aa12.72□□□□□ -0.37
MSH5-202ENST00000375740 TCRBP04435 133 aa12.72□□□□□ -0.37
MSH5-202ENST00000375740 FBLP22087 321 aaKnown RBP12.72□□□□□ -0.37
MSH5-202ENST00000375740 F8A1P23610 371 aa12.72□□□□□ -0.37
MSH5-202ENST00000375740 PYCR1P32322 319 aa12.72□□□□□ -0.37
MSH5-202ENST00000375740 MTNR1BP49286 362 aa12.72□□□□□ -0.37
MSH5-202ENST00000375740 ELAVL1Q15717 326 aaKnown RBP12.72□□□□□ -0.37
MSH5-202ENST00000375740 NSDHLQ15738 373 aa12.72□□□□□ -0.37
MSH5-202ENST00000375740 TP53I3Q53FA7 332 aa12.72□□□□□ -0.37
MSH5-202ENST00000375740 FAM27D1Q5T7N8 215 aa12.72□□□□□ -0.37
MSH5-202ENST00000375740 LYPD4Q6UWN0 246 aa12.72□□□□□ -0.37
MSH5-202ENST00000375740 TFAP2EQ6VUC0 442 aa12.72□□□□□ -0.37
MSH5-202ENST00000375740 CARFQ8N187 725 aa12.72□□□□□ -0.37
MSH5-202ENST00000375740 C10orf53Q8N6V4 93 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms