RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 ITPKBP27987 946 aa10.13□□□□□ -0.79
CCDC40-203ENST00000374877 SGCGQ13326 291 aa10.13□□□□□ -0.79
CCDC40-203ENST00000374877 GAS6Q14393 721 aa10.13□□□□□ -0.79
CCDC40-203ENST00000374877 DCAF12L2Q5VW00 463 aa10.13□□□□□ -0.79
CCDC40-203ENST00000374877 B3GNTL1Q67FW5 361 aaPredicted RBP10.13□□□□□ -0.79
CCDC40-203ENST00000374877 OR7E24Q6IFN5 339 aa10.13□□□□□ -0.79
CCDC40-203ENST00000374877 UBALD2Q8IYN6 164 aa10.13□□□□□ -0.79
CCDC40-203ENST00000374877 RAB40AQ8WXH6 277 aa10.13□□□□□ -0.79
CCDC40-203ENST00000374877 MARC2Q969Z3 335 aa10.13□□□□□ -0.79
CCDC40-203ENST00000374877 SLITRK2Q9H156 845 aa10.13□□□□□ -0.79
CCDC40-203ENST00000374877 CA14Q9ULX7 337 aa10.13□□□□□ -0.79
CCDC40-203ENST00000374877 A0A0B4J2E0 115 aa10.13□□□□□ -0.79
CCDC40-203ENST00000374877 A0A1B0GX12 115 aa10.13□□□□□ -0.79
CCDC40-203ENST00000374877 A0A1W2PQU0 124 aa10.13□□□□□ -0.79
CCDC40-203ENST00000374877 PRICKLE3O43900 615 aaPredicted RBP10.13□□□□□ -0.79
CCDC40-203ENST00000374877 RBBP9O75884 186 aa10.13□□□□□ -0.79
CCDC40-203ENST00000374877 NDUFB2O95178 105 aa10.13□□□□□ -0.79
CCDC40-203ENST00000374877 SLC35G6P0C7Q6 338 aa10.13□□□□□ -0.79
CCDC40-203ENST00000374877 FAUP35544 74 aaKnown RBP10.13□□□□□ -0.79
CCDC40-203ENST00000374877 ARHGDIBP52566 201 aa10.13□□□□□ -0.79
CCDC40-203ENST00000374877 GMFBP60983 142 aa10.13□□□□□ -0.79
CCDC40-203ENST00000374877 MRPS10P82664 201 aaKnown RBP10.13□□□□□ -0.79
CCDC40-203ENST00000374877 SORDQ00796 357 aa10.13□□□□□ -0.79
CCDC40-203ENST00000374877 DEFA5Q01523 94 aa10.13□□□□□ -0.79
CCDC40-203ENST00000374877 PLAURQ03405 335 aa10.13□□□□□ -0.79
CCDC40-203ENST00000374877 RUNX2Q13950 521 aa10.13□□□□□ -0.79
CCDC40-203ENST00000374877 IRF4Q15306 451 aa10.13□□□□□ -0.79
CCDC40-203ENST00000374877 SAMD14Q8IZD0 417 aaPredicted RBP10.13□□□□□ -0.79
CCDC40-203ENST00000374877 OR14A16Q8NHC5 309 aa10.13□□□□□ -0.79
CCDC40-203ENST00000374877 MRPL48Q96GC5 212 aaKnown RBP10.13□□□□□ -0.79
CCDC40-203ENST00000374877 SLC6A17Q9H1V8 727 aa10.13□□□□□ -0.79
CCDC40-203ENST00000374877 CHRNA9Q9UGM1 479 aa10.13□□□□□ -0.79
CCDC40-203ENST00000374877 C19orf53Q9UNZ5 99 aaPredicted RBP10.13□□□□□ -0.79
CCDC40-203ENST00000374877 HMSDA8MTL9 139 aa10.13□□□□□ -0.79
CCDC40-203ENST00000374877 D6RAR5 112 aa10.13□□□□□ -0.79
CCDC40-203ENST00000374877 ADAM11O75078 769 aa10.13□□□□□ -0.79
CCDC40-203ENST00000374877 MAS1P04201 325 aa10.13□□□□□ -0.79
CCDC40-203ENST00000374877 HOXC4P09017 264 aaPredicted RBP10.13□□□□□ -0.79
CCDC40-203ENST00000374877 ILF3Q12906 894 aaKnown RBP eCLIP10.13□□□□□ -0.79
CCDC40-203ENST00000374877 RBMS2Q15434 407 aaKnown RBP10.13□□□□□ -0.79
CCDC40-203ENST00000374877 YOD1Q5VVQ6 348 aaPredicted RBP10.13□□□□□ -0.79
CCDC40-203ENST00000374877 STAC2Q6ZMT1 411 aa10.13□□□□□ -0.79
CCDC40-203ENST00000374877 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.13□□□□□ -0.79
CCDC40-203ENST00000374877 OR2AK2Q8NG84 335 aa10.13□□□□□ -0.79
CCDC40-203ENST00000374877 OR4C16Q8NGL9 310 aa10.13□□□□□ -0.79
CCDC40-203ENST00000374877 OR8K3Q8NH51 312 aa10.13□□□□□ -0.79
CCDC40-203ENST00000374877 ZPLD1Q8TCW7 415 aa10.13□□□□□ -0.79
CCDC40-203ENST00000374877 RGP1Q92546 391 aaPredicted RBP10.13□□□□□ -0.79
CCDC40-203ENST00000374877 SLC17A9Q9BYT1 436 aa10.13□□□□□ -0.79
CCDC40-203ENST00000374877 MFFQ9GZY8 342 aa10.13□□□□□ -0.79
CCDC40-203ENST00000374877 LMAN1LQ9HAT1 526 aa10.13□□□□□ -0.79
CCDC40-203ENST00000374877 PHPT1Q9NRX4 125 aaPredicted RBP10.13□□□□□ -0.79
CCDC40-203ENST00000374877 C14orf105Q9NVL8 296 aa10.13□□□□□ -0.79
CCDC40-203ENST00000374877 FBXO9Q9UK97 447 aaPredicted RBP10.13□□□□□ -0.79
CCDC40-203ENST00000374877 RLN2P04090 185 aa10.12□□□□□ -0.79
CCDC40-203ENST00000374877 FNTBP49356 437 aa10.12□□□□□ -0.79
CCDC40-203ENST00000374877 DIO1P49895 249 aa10.12□□□□□ -0.79
CCDC40-203ENST00000374877 PLA2G7Q13093 441 aa10.12□□□□□ -0.79
CCDC40-203ENST00000374877 FGL2Q14314 439 aa10.12□□□□□ -0.79
CCDC40-203ENST00000374877 ETFDHQ16134 617 aa10.12□□□□□ -0.79
CCDC40-203ENST00000374877 ZNF660Q6AZW8 331 aaPredicted RBP10.12□□□□□ -0.79
CCDC40-203ENST00000374877 ZNF425Q6IV72 752 aa10.12□□□□□ -0.79
CCDC40-203ENST00000374877 HSD17B13Q7Z5P4 300 aaPredicted RBP10.12□□□□□ -0.79
CCDC40-203ENST00000374877 NAXDQ8IW45 347 aa10.12□□□□□ -0.79
CCDC40-203ENST00000374877 MUC20Q8N307 709 aaPredicted RBP10.12□□□□□ -0.79
CCDC40-203ENST00000374877 CDRT4Q8N9R6 151 aa10.12□□□□□ -0.79
CCDC40-203ENST00000374877 OR4D10Q8NGI6 311 aa10.12□□□□□ -0.79
CCDC40-203ENST00000374877 LCN9Q8WX39 176 aa10.12□□□□□ -0.79
CCDC40-203ENST00000374877 ST8SIA2Q92186 375 aa10.12□□□□□ -0.79
CCDC40-203ENST00000374877 PHYHIPQ92561 330 aa10.12□□□□□ -0.79
CCDC40-203ENST00000374877 MIB2Q96AX9 1013 aa10.12□□□□□ -0.79
CCDC40-203ENST00000374877 RASD2Q96D21 266 aa10.12□□□□□ -0.79
CCDC40-203ENST00000374877 SERTAD3Q9UJW9 196 aa10.12□□□□□ -0.79
CCDC40-203ENST00000374877 ZNF346Q9UL40 294 aaKnown RBP10.12□□□□□ -0.79
CCDC40-203ENST00000374877 ICAM5Q9UMF0 924 aa10.12□□□□□ -0.79
CCDC40-203ENST00000374877 TRBV23OR9-2A0A075B6M9 112 aa10.12□□□□□ -0.79
CCDC40-203ENST00000374877 B3GALT2O43825 422 aa10.12□□□□□ -0.79
CCDC40-203ENST00000374877 SNAPC5O75971 98 aa10.12□□□□□ -0.79
CCDC40-203ENST00000374877 OR8G3PP0DMU2 310 aa10.12□□□□□ -0.79
CCDC40-203ENST00000374877 MAT1AQ00266 395 aaKnown RBP10.12□□□□□ -0.79
CCDC40-203ENST00000374877 FHL1Q13642 323 aa10.12□□□□□ -0.79
CCDC40-203ENST00000374877 ODF4Q2M2E3 257 aa10.12□□□□□ -0.79
CCDC40-203ENST00000374877 C4orf46Q504U0 113 aa10.12□□□□□ -0.79
CCDC40-203ENST00000374877 GLB1L2Q8IW92 636 aa10.12□□□□□ -0.79
CCDC40-203ENST00000374877 CDH26Q8IXH8 852 aa10.12□□□□□ -0.79
CCDC40-203ENST00000374877 OR5M9Q8NGP3 310 aa10.12□□□□□ -0.79
CCDC40-203ENST00000374877 ZNF416Q9BWM5 594 aa10.12□□□□□ -0.79
CCDC40-203ENST00000374877 OR6C68A6NDL8 312 aa10.12□□□□□ -0.79
CCDC40-203ENST00000374877 SMAD9O15198 467 aaKnown RBP10.12□□□□□ -0.79
CCDC40-203ENST00000374877 ANXA2P07355 339 aaKnown RBP10.12□□□□□ -0.79
CCDC40-203ENST00000374877 SPI1P17947 270 aa10.12□□□□□ -0.79
CCDC40-203ENST00000374877 EMDP50402 254 aa10.12□□□□□ -0.79
CCDC40-203ENST00000374877 LTBQ06643 244 aa10.12□□□□□ -0.79
CCDC40-203ENST00000374877 CSRP2Q16527 193 aa10.12□□□□□ -0.79
CCDC40-203ENST00000374877 TSSK4Q6SA08 328 aa10.12□□□□□ -0.79
CCDC40-203ENST00000374877 MAMSTRQ6ZN01 415 aa10.12□□□□□ -0.79
CCDC40-203ENST00000374877 Q6ZS52 159 aa10.12□□□□□ -0.79
CCDC40-203ENST00000374877 ZNF511Q8NB15 262 aa10.12□□□□□ -0.79
CCDC40-203ENST00000374877 OR8S1Q8NH09 359 aa10.12□□□□□ -0.79
CCDC40-203ENST00000374877 NARS2Q96I59 477 aaKnown RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms