RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 TACSTD2P09758 323 aa18.67■□□□□ 0.58
VEGFA-204ENST00000372064 RRAS2P62070 204 aaPredicted RBP18.67■□□□□ 0.58
VEGFA-204ENST00000372064 LCN6P62502 163 aa18.67■□□□□ 0.58
VEGFA-204ENST00000372064 PLCXD2Q0VAA5 305 aa18.67■□□□□ 0.58
VEGFA-204ENST00000372064 GPR139Q6DWJ6 353 aa18.67■□□□□ 0.58
VEGFA-204ENST00000372064 PTCRAQ6ISU1 281 aaPredicted RBP18.67■□□□□ 0.58
VEGFA-204ENST00000372064 LANCL3Q6ZV70 420 aa18.67■□□□□ 0.58
VEGFA-204ENST00000372064 YIPF7Q8N8F6 280 aa18.67■□□□□ 0.58
VEGFA-204ENST00000372064 SHDQ96IW2 340 aa18.67■□□□□ 0.58
VEGFA-204ENST00000372064 DERL3Q96Q80 235 aa18.67■□□□□ 0.58
VEGFA-204ENST00000372064 SRA1Q9HD15 236 aaKnown RBP18.67■□□□□ 0.58
VEGFA-204ENST00000372064 WNT16Q9UBV4 365 aa18.67■□□□□ 0.58
VEGFA-204ENST00000372064 MRM2Q9UI43 246 aaKnown RBP18.67■□□□□ 0.58
VEGFA-204ENST00000372064 CAMK2AQ9UQM7 478 aa18.67■□□□□ 0.58
VEGFA-204ENST00000372064 TMEM72A0PK05 275 aa18.67■□□□□ 0.58
VEGFA-204ENST00000372064 NDUFB5O43674 189 aa18.67■□□□□ 0.58
VEGFA-204ENST00000372064 UBE2NLQ5JXB2 153 aa18.67■□□□□ 0.58
VEGFA-204ENST00000372064 BICRALQ6AI39 1079 aa18.67■□□□□ 0.58
VEGFA-204ENST00000372064 PRSS42Q7Z5A4 293 aa18.67■□□□□ 0.58
VEGFA-204ENST00000372064 ZNF441Q8N8Z8 693 aa18.67■□□□□ 0.58
VEGFA-204ENST00000372064 OR1N1Q8NGS0 311 aa18.67■□□□□ 0.58
VEGFA-204ENST00000372064 OR2T4Q8NH00 348 aa18.67■□□□□ 0.58
VEGFA-204ENST00000372064 ZNF501Q96CX3 271 aaPredicted RBP18.67■□□□□ 0.58
VEGFA-204ENST00000372064 ELF4Q99607 663 aaPredicted RBP18.67■□□□□ 0.58
VEGFA-204ENST00000372064 CTSFQ9UBX1 484 aa18.67■□□□□ 0.58
VEGFA-204ENST00000372064 CLEC4AQ9UMR7 237 aa18.67■□□□□ 0.58
VEGFA-204ENST00000372064 PDCD5O14737 125 aa18.66■□□□□ 0.58
VEGFA-204ENST00000372064 CTDSPLO15194 276 aa18.66■□□□□ 0.58
VEGFA-204ENST00000372064 TCEA1P23193 301 aaKnown RBP18.66■□□□□ 0.58
VEGFA-204ENST00000372064 GPLD1P80108 840 aa18.66■□□□□ 0.58
VEGFA-204ENST00000372064 DMWDQ09019 674 aa18.66■□□□□ 0.58
VEGFA-204ENST00000372064 MRPL28Q13084 256 aaKnown RBP18.66■□□□□ 0.58
VEGFA-204ENST00000372064 C1QL3Q5VWW1 255 aa18.66■□□□□ 0.58
VEGFA-204ENST00000372064 OR6V1Q8N148 313 aa18.66■□□□□ 0.58
VEGFA-204ENST00000372064 HSD17B8Q92506 261 aa18.66■□□□□ 0.58
VEGFA-204ENST00000372064 ORAI1Q96D31 301 aa18.66■□□□□ 0.58
VEGFA-204ENST00000372064 OMA1Q96E52 524 aa18.66■□□□□ 0.58
VEGFA-204ENST00000372064 TMEM165Q9HC07 324 aa18.66■□□□□ 0.58
VEGFA-204ENST00000372064 PAQR5Q9NXK6 330 aaPredicted RBP18.66■□□□□ 0.58
VEGFA-204ENST00000372064 TP53BP1Q12888 1972 aaPredicted RBP18.66■□□□□ 0.58
VEGFA-204ENST00000372064 GSTZ1O43708 216 aaPredicted RBP18.66■□□□□ 0.58
VEGFA-204ENST00000372064 NUDT14O95848 222 aa18.66■□□□□ 0.58
VEGFA-204ENST00000372064 HIST1H2ABP04908 130 aa18.66■□□□□ 0.58
VEGFA-204ENST00000372064 SRP9P49458 86 aaKnown RBP18.66■□□□□ 0.58
VEGFA-204ENST00000372064 HIST3H2AQ7L7L0 130 aa18.66■□□□□ 0.58
VEGFA-204ENST00000372064 LGALS14Q8TCE9 139 aa18.66■□□□□ 0.58
VEGFA-204ENST00000372064 HIST1H2ACQ93077 130 aa18.66■□□□□ 0.58
VEGFA-204ENST00000372064 COPS7AQ9UBW8 275 aa18.66■□□□□ 0.58
VEGFA-204ENST00000372064 TRAV36DV7A0A075B6V5 113 aa18.65■□□□□ 0.58
VEGFA-204ENST00000372064 ACOD1A6NK06 481 aa18.65■□□□□ 0.58
VEGFA-204ENST00000372064 OR6C76A6NM76 312 aa18.65■□□□□ 0.58
VEGFA-204ENST00000372064 CXCR1P25024 350 aa18.65■□□□□ 0.58
VEGFA-204ENST00000372064 ABCD3P28288 659 aa18.65■□□□□ 0.58
VEGFA-204ENST00000372064 NTRK2Q16620 822 aa18.65■□□□□ 0.58
VEGFA-204ENST00000372064 EEF1A1P5Q5VTE0 462 aa18.65■□□□□ 0.58
VEGFA-204ENST00000372064 FAM220AQ7Z4H9 259 aa18.65■□□□□ 0.58
VEGFA-204ENST00000372064 KMT5CQ86Y97 462 aa18.65■□□□□ 0.58
VEGFA-204ENST00000372064 ADAMTS14Q8WXS8 1223 aa18.65■□□□□ 0.58
VEGFA-204ENST00000372064 ADAD1Q96M93 576 aaKnown RBP18.65■□□□□ 0.58
VEGFA-204ENST00000372064 MNTQ99583 582 aa18.65■□□□□ 0.58
VEGFA-204ENST00000372064 TRAF4Q9BUZ4 470 aaPredicted RBP18.65■□□□□ 0.58
VEGFA-204ENST00000372064 TBL1XR1Q9BZK7 514 aa18.65■□□□□ 0.58
VEGFA-204ENST00000372064 IFITM5A6NNB3 132 aa18.65■□□□□ 0.58
VEGFA-204ENST00000372064 AIPO00170 330 aa18.65■□□□□ 0.58
VEGFA-204ENST00000372064 OR8G3PP0DMU2 310 aa18.65■□□□□ 0.58
VEGFA-204ENST00000372064 PNLIPRP2P54317 469 aa18.65■□□□□ 0.58
VEGFA-204ENST00000372064 DGCR2P98153 550 aa18.65■□□□□ 0.58
VEGFA-204ENST00000372064 YOD1Q5VVQ6 348 aaPredicted RBP18.65■□□□□ 0.58
VEGFA-204ENST00000372064 ASCC1Q8N9N2 400 aaKnown RBP18.65■□□□□ 0.58
VEGFA-204ENST00000372064 TAS2R5Q9NYW4 299 aa18.65■□□□□ 0.58
VEGFA-204ENST00000372064 RABL2AQ9UBK7 228 aaPredicted RBP18.65■□□□□ 0.58
VEGFA-204ENST00000372064 RABL2BQ9UNT1 228 aa18.65■□□□□ 0.58
VEGFA-204ENST00000372064 MAGEB1P43366 347 aa18.64■□□□□ 0.58
VEGFA-204ENST00000372064 LIPNQ5VXI9 398 aa18.64■□□□□ 0.58
VEGFA-204ENST00000372064 KRT74Q7RTS7 529 aa18.64■□□□□ 0.58
VEGFA-204ENST00000372064 SLC29A4Q7RTT9 530 aa18.64■□□□□ 0.58
VEGFA-204ENST00000372064 AKAP1Q92667 903 aaKnown RBP eCLIP18.64■□□□□ 0.586e-12■□□□□ 9.5
VEGFA-204ENST00000372064 GALNT9Q9HCQ5 603 aa18.64■□□□□ 0.58
VEGFA-204ENST00000372064 ADAMTS20P59510 1910 aa18.64■□□□□ 0.57
VEGFA-204ENST00000372064 A0A087WV48 116 aa18.64■□□□□ 0.57
VEGFA-204ENST00000372064 OR6C70A6NIJ9 312 aa18.64■□□□□ 0.57
VEGFA-204ENST00000372064 RENP00797 406 aa18.64■□□□□ 0.57
VEGFA-204ENST00000372064 CD3GP09693 182 aa18.64■□□□□ 0.57
VEGFA-204ENST00000372064 PGCP20142 388 aa18.64■□□□□ 0.57
VEGFA-204ENST00000372064 ALKBH1Q13686 389 aaKnown RBP18.64■□□□□ 0.57
VEGFA-204ENST00000372064 ZNF671Q8TAW3 534 aa18.64■□□□□ 0.57
VEGFA-204ENST00000372064 PTDSS2Q9BVG9 487 aa18.64■□□□□ 0.57
VEGFA-204ENST00000372064 PLSCR3Q9NRY6 295 aa18.64■□□□□ 0.57
VEGFA-204ENST00000372064 MCUBQ9NWR8 336 aa18.64■□□□□ 0.57
VEGFA-204ENST00000372064 FRRS1LQ9P0K9 344 aa18.64■□□□□ 0.57
VEGFA-204ENST00000372064 BOLA1Q9Y3E2 137 aa18.64■□□□□ 0.57
VEGFA-204ENST00000372064 IGHV3-20A0A0C4DH32 117 aa18.63■□□□□ 0.57
VEGFA-204ENST00000372064 TVP23AA6NH52 213 aa18.63■□□□□ 0.57
VEGFA-204ENST00000372064 FAM47E-STBD1D6RA91 191 aa18.63■□□□□ 0.57
VEGFA-204ENST00000372064 SCO2O43819 266 aa18.63■□□□□ 0.57
VEGFA-204ENST00000372064 EFR3AQ14156 821 aa18.63■□□□□ 0.57
VEGFA-204ENST00000372064 FAM199XQ6PEV8 388 aaPredicted RBP18.63■□□□□ 0.57
VEGFA-204ENST00000372064 WDR74Q6RFH5 385 aaPredicted RBP18.63■□□□□ 0.57
VEGFA-204ENST00000372064 ESPNLQ6ZVH7 1005 aa18.63■□□□□ 0.57
VEGFA-204ENST00000372064 TOMM5Q8N4H5 51 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms