RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.01□□□□□ -0.65
TUBE1-202ENST00000368662 C1DQ13901 141 aaKnown RBP11.01□□□□□ -0.65
TUBE1-202ENST00000368662 KRTCAP3Q53RY4 240 aa11.01□□□□□ -0.65
TUBE1-202ENST00000368662 NXNL2Q5VZ03 156 aa11.01□□□□□ -0.65
TUBE1-202ENST00000368662 GPAT4Q86UL3 456 aa11.01□□□□□ -0.65
TUBE1-202ENST00000368662 TEX19Q8NA77 164 aa11.01□□□□□ -0.65
TUBE1-202ENST00000368662 SNX18Q96RF0 628 aa11.01□□□□□ -0.65
TUBE1-202ENST00000368662 PRDM14Q9GZV8 571 aa11.01□□□□□ -0.65
TUBE1-202ENST00000368662 TSPAN10Q9H1Z9 355 aaPredicted RBP11.01□□□□□ -0.65
TUBE1-202ENST00000368662 PLCXD1Q9NUJ7 323 aa11.01□□□□□ -0.65
TUBE1-202ENST00000368662 H2AFY2Q9P0M6 372 aaPredicted RBP11.01□□□□□ -0.65
TUBE1-202ENST00000368662 B3GAT1Q9P2W7 334 aa11.01□□□□□ -0.65
TUBE1-202ENST00000368662 SPRR3Q9UBC9 169 aa11.01□□□□□ -0.65
TUBE1-202ENST00000368662 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.01□□□□□ -0.65
TUBE1-202ENST00000368662 GPR52Q9Y2T5 361 aa11.01□□□□□ -0.65
TUBE1-202ENST00000368662 TPRKBQ9Y3C4 175 aa11.01□□□□□ -0.65
TUBE1-202ENST00000368662 SLC1A7O00341 560 aa11□□□□□ -0.65
TUBE1-202ENST00000368662 SMAD9O15198 467 aaKnown RBP11□□□□□ -0.65
TUBE1-202ENST00000368662 SERPINI2O75830 405 aa11□□□□□ -0.65
TUBE1-202ENST00000368662 SYNGR4O95473 234 aa11□□□□□ -0.65
TUBE1-202ENST00000368662 SLC2A10O95528 541 aa11□□□□□ -0.65
TUBE1-202ENST00000368662 BCL10O95999 233 aa11□□□□□ -0.65
TUBE1-202ENST00000368662 PLGP00747 810 aaPredicted RBP11□□□□□ -0.65
TUBE1-202ENST00000368662 RPSAP08865 295 aaKnown RBP11□□□□□ -0.65
TUBE1-202ENST00000368662 MLLT10P55197 1068 aa11□□□□□ -0.65
TUBE1-202ENST00000368662 ITGADQ13349 1161 aa11□□□□□ -0.65
TUBE1-202ENST00000368662 KRR1Q13601 381 aaKnown RBP11□□□□□ -0.65
TUBE1-202ENST00000368662 KCTD21Q4G0X4 260 aa11□□□□□ -0.65
TUBE1-202ENST00000368662 ZNF362Q5T0B9 420 aaPredicted RBP11□□□□□ -0.65
TUBE1-202ENST00000368662 SLC35D2Q76EJ3 337 aa11□□□□□ -0.65
TUBE1-202ENST00000368662 CXXC5Q7LFL8 322 aaKnown RBP11□□□□□ -0.65
TUBE1-202ENST00000368662 GID4Q8IVV7 300 aa11□□□□□ -0.65
TUBE1-202ENST00000368662 KDM8Q8N371 416 aa11□□□□□ -0.65
TUBE1-202ENST00000368662 BPIFB6Q8NFQ5 453 aa11□□□□□ -0.65
TUBE1-202ENST00000368662 OR52E2Q8NGJ4 325 aa11□□□□□ -0.65
TUBE1-202ENST00000368662 OR4K13Q8NH42 304 aa11□□□□□ -0.65
TUBE1-202ENST00000368662 WDYHV1Q96HA8 205 aa11□□□□□ -0.65
TUBE1-202ENST00000368662 CRELD1Q96HD1 420 aa11□□□□□ -0.65
TUBE1-202ENST00000368662 Q96M85 177 aa11□□□□□ -0.65
TUBE1-202ENST00000368662 ADAD1Q96M93 576 aaKnown RBP11□□□□□ -0.65
TUBE1-202ENST00000368662 SLC25A18Q9H1K4 315 aa11□□□□□ -0.65
TUBE1-202ENST00000368662 PKD1L2Q7Z442 2459 aa11□□□□□ -0.65
TUBE1-202ENST00000368662 KDM4EB2RXH2 506 aaPredicted RBP11□□□□□ -0.65
TUBE1-202ENST00000368662 NPIPA2E9PIF3 369 aa11□□□□□ -0.65
TUBE1-202ENST00000368662 NPIPA3F8WFD2 350 aa11□□□□□ -0.65
TUBE1-202ENST00000368662 PRODHO43272 600 aa11□□□□□ -0.65
TUBE1-202ENST00000368662 LYNP07948 512 aa11□□□□□ -0.65
TUBE1-202ENST00000368662 HLA-DOBP13765 273 aa11□□□□□ -0.65
TUBE1-202ENST00000368662 IFNGR1P15260 489 aa11□□□□□ -0.65
TUBE1-202ENST00000368662 FMO3P31513 532 aa11□□□□□ -0.65
TUBE1-202ENST00000368662 ACVR1BP36896 505 aa11□□□□□ -0.65
TUBE1-202ENST00000368662 FCRLAQ7L513 359 aa11□□□□□ -0.65
TUBE1-202ENST00000368662 CPOQ8IVL8 374 aa11□□□□□ -0.65
TUBE1-202ENST00000368662 GHDCQ8N2G8 530 aa11□□□□□ -0.65
TUBE1-202ENST00000368662 SLC37A3Q8NCC5 494 aa11□□□□□ -0.65
TUBE1-202ENST00000368662 ZNF519Q8TB69 540 aa11□□□□□ -0.65
TUBE1-202ENST00000368662 RASD2Q96D21 266 aa11□□□□□ -0.65
TUBE1-202ENST00000368662 GPR137Q96N19 417 aa11□□□□□ -0.65
TUBE1-202ENST00000368662 ZNF696Q9H7X3 374 aa11□□□□□ -0.65
TUBE1-202ENST00000368662 RPL36Q9Y3U8 105 aaKnown RBP11□□□□□ -0.65
TUBE1-202ENST00000368662 SPTA1P02549 2419 aa10.99□□□□□ -0.65
TUBE1-202ENST00000368662 ZNF814B7Z6K7 855 aa10.99□□□□□ -0.65
TUBE1-202ENST00000368662 AHCYL1O43865 530 aa10.99□□□□□ -0.65
TUBE1-202ENST00000368662 ENTPD6O75354 484 aa10.99□□□□□ -0.65
TUBE1-202ENST00000368662 RENP00797 406 aa10.99□□□□□ -0.65
TUBE1-202ENST00000368662 CRHBPP24387 322 aa10.99□□□□□ -0.65
TUBE1-202ENST00000368662 GABARAPL2P60520 117 aa10.99□□□□□ -0.65
TUBE1-202ENST00000368662 KLRB1Q12918 225 aa10.99□□□□□ -0.65
TUBE1-202ENST00000368662 CRMP1Q14194 572 aa10.99□□□□□ -0.65
TUBE1-202ENST00000368662 SLC17A1Q14916 467 aa10.99□□□□□ -0.65
TUBE1-202ENST00000368662 MESTQ5EB52 335 aa10.99□□□□□ -0.65
TUBE1-202ENST00000368662 ARMC4Q5T2S8 1044 aa10.99□□□□□ -0.65
TUBE1-202ENST00000368662 AADACL4Q5VUY2 407 aa10.99□□□□□ -0.65
TUBE1-202ENST00000368662 ABLIM2Q6H8Q1 611 aa10.99□□□□□ -0.65
TUBE1-202ENST00000368662 LAIR2Q6ISS4 152 aa10.99□□□□□ -0.65
TUBE1-202ENST00000368662 PLBD1Q6P4A8 553 aa10.99□□□□□ -0.65
TUBE1-202ENST00000368662 LEG1Q6P5S2 330 aa10.99□□□□□ -0.65
TUBE1-202ENST00000368662 Q8NA96 180 aa10.99□□□□□ -0.65
TUBE1-202ENST00000368662 SDR9C7Q8NEX9 313 aa10.99□□□□□ -0.65
TUBE1-202ENST00000368662 ZNF582Q96NG8 517 aaPredicted RBP10.99□□□□□ -0.65
TUBE1-202ENST00000368662 UCN2Q96RP3 112 aa10.99□□□□□ -0.65
TUBE1-202ENST00000368662 NMNAT3Q96T66 252 aa10.99□□□□□ -0.65
TUBE1-202ENST00000368662 HINT3Q9NQE9 182 aaKnown RBP10.99□□□□□ -0.65
TUBE1-202ENST00000368662 AASSQ9UDR5 926 aa10.99□□□□□ -0.65
TUBE1-202ENST00000368662 CAMK2AQ9UQM7 478 aa10.99□□□□□ -0.65
TUBE1-202ENST00000368662 IGHV3-15A0A0B4J1V0 119 aa10.99□□□□□ -0.65
TUBE1-202ENST00000368662 ERVH48-1M5A8F1 160 aa10.99□□□□□ -0.65
TUBE1-202ENST00000368662 ARHGEF9O43307 516 aa10.99□□□□□ -0.65
TUBE1-202ENST00000368662 TRAF3IP2O43734 574 aaPredicted RBP10.99□□□□□ -0.65
TUBE1-202ENST00000368662 AKAP8O43823 692 aaKnown RBP10.99□□□□□ -0.65
TUBE1-202ENST00000368662 CYTIPO60759 359 aa10.99□□□□□ -0.65
TUBE1-202ENST00000368662 FAM20BO75063 409 aa10.99□□□□□ -0.65
TUBE1-202ENST00000368662 FCGR2AP12318 317 aa10.99□□□□□ -0.65
TUBE1-202ENST00000368662 SLC16A1P53985 500 aa10.99□□□□□ -0.65
TUBE1-202ENST00000368662 LGALS3BPQ08380 585 aa10.99□□□□□ -0.65
TUBE1-202ENST00000368662 TMED1Q13445 227 aa10.99□□□□□ -0.65
TUBE1-202ENST00000368662 SF3B4Q15427 424 aaKnown RBP eCLIP10.99□□□□□ -0.655e-13■□□□□ 10.4
TUBE1-202ENST00000368662 GTF2IRD2BQ6EKJ0 949 aa10.99□□□□□ -0.65
TUBE1-202ENST00000368662 GTF2IRD2Q86UP8 949 aa10.99□□□□□ -0.65
TUBE1-202ENST00000368662 NPEPL1Q8NDH3 523 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms