RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 CDK6Q00534 326 aa13.85□□□□□ -0.19
CKS1B-202ENST00000368436 MFSD13AQ14CX5 517 aa13.85□□□□□ -0.19
CKS1B-202ENST00000368436 GLIPR1L2Q4G1C9 344 aa13.85□□□□□ -0.19
CKS1B-202ENST00000368436 GCNT6Q5T4J0 391 aa13.85□□□□□ -0.19
CKS1B-202ENST00000368436 IL17RELQ6ZVW7 336 aa13.85□□□□□ -0.19
CKS1B-202ENST00000368436 SPATA21Q7Z572 469 aa13.85□□□□□ -0.19
CKS1B-202ENST00000368436 C20orf196Q8IYI0 205 aa13.85□□□□□ -0.19
CKS1B-202ENST00000368436 SVOPLQ8N434 492 aa13.85□□□□□ -0.19
CKS1B-202ENST00000368436 SLC47A1Q96FL8 570 aa13.85□□□□□ -0.19
CKS1B-202ENST00000368436 LRR1Q96L50 414 aa13.85□□□□□ -0.19
CKS1B-202ENST00000368436 SOX7Q9BT81 388 aa13.85□□□□□ -0.19
CKS1B-202ENST00000368436 SPATA5L1Q9BVQ7 753 aa13.85□□□□□ -0.19
CKS1B-202ENST00000368436 TMBIM4Q9HC24 238 aa13.85□□□□□ -0.19
CKS1B-202ENST00000368436 TESQ9UGI8 421 aaKnown RBP13.85□□□□□ -0.19
CKS1B-202ENST00000368436 CORINQ9Y5Q5 1042 aa13.85□□□□□ -0.19
CKS1B-202ENST00000368436 TRBV5-3A0A0A0MS03 114 aa13.84□□□□□ -0.19
CKS1B-202ENST00000368436 M0R3G1 203 aa13.84□□□□□ -0.19
CKS1B-202ENST00000368436 TGDSO95455 350 aa13.84□□□□□ -0.19
CKS1B-202ENST00000368436 BGLAPP02818 100 aa13.84□□□□□ -0.19
CKS1B-202ENST00000368436 ERCC1P07992 297 aaPredicted RBP13.84□□□□□ -0.19
CKS1B-202ENST00000368436 HLA-DOBP13765 273 aa13.84□□□□□ -0.19
CKS1B-202ENST00000368436 HNF1AP20823 631 aa13.84□□□□□ -0.19
CKS1B-202ENST00000368436 CBLP22681 906 aa13.84□□□□□ -0.19
CKS1B-202ENST00000368436 STX1BP61266 288 aa13.84□□□□□ -0.19
CKS1B-202ENST00000368436 POU3F1Q03052 451 aaPredicted RBP13.84□□□□□ -0.19
CKS1B-202ENST00000368436 PAGE3Q5JUK9 113 aa13.84□□□□□ -0.19
CKS1B-202ENST00000368436 ZNF627Q7L945 461 aa13.84□□□□□ -0.19
CKS1B-202ENST00000368436 KRT73Q86Y46 540 aa13.84□□□□□ -0.19
CKS1B-202ENST00000368436 UEVLDQ8IX04 471 aa13.84□□□□□ -0.19
CKS1B-202ENST00000368436 ZCCHC24Q8N2G6 241 aaKnown RBP13.84□□□□□ -0.19
CKS1B-202ENST00000368436 ZNF786Q8N393 782 aa13.84□□□□□ -0.19
CKS1B-202ENST00000368436 SCAIQ8N9R8 606 aa13.84□□□□□ -0.19
CKS1B-202ENST00000368436 SPDL1Q96EA4 605 aa13.84□□□□□ -0.19
CKS1B-202ENST00000368436 C7orf26Q96N11 449 aa13.84□□□□□ -0.19
CKS1B-202ENST00000368436 ZNF75AQ96N20 296 aa13.84□□□□□ -0.19
CKS1B-202ENST00000368436 TMEM38AQ9H6F2 299 aa13.84□□□□□ -0.19
CKS1B-202ENST00000368436 TCF7L2Q9NQB0 619 aa13.84□□□□□ -0.19
CKS1B-202ENST00000368436 VAPAQ9P0L0 249 aa13.84□□□□□ -0.19
CKS1B-202ENST00000368436 A0A0B4J2E0 115 aa13.83□□□□□ -0.2
CKS1B-202ENST00000368436 A0A1B0GX12 115 aa13.83□□□□□ -0.2
CKS1B-202ENST00000368436 LRP5LA4QPB2 252 aa13.83□□□□□ -0.2
CKS1B-202ENST00000368436 TPST2O60704 377 aa13.83□□□□□ -0.2
CKS1B-202ENST00000368436 LILRA1O75019 489 aa13.83□□□□□ -0.2
CKS1B-202ENST00000368436 SEC14L2O76054 403 aa13.83□□□□□ -0.2
CKS1B-202ENST00000368436 NQO1P15559 274 aaKnown RBP13.83□□□□□ -0.2
CKS1B-202ENST00000368436 GPX2P18283 190 aa13.83□□□□□ -0.2
CKS1B-202ENST00000368436 NR4A1P22736 598 aa13.83□□□□□ -0.2
CKS1B-202ENST00000368436 EVX1P49640 407 aa13.83□□□□□ -0.2
CKS1B-202ENST00000368436 CHN2P52757 468 aa13.83□□□□□ -0.2
CKS1B-202ENST00000368436 IL1RL1Q01638 556 aa13.83□□□□□ -0.2
CKS1B-202ENST00000368436 NPRL3Q12980 569 aa13.83□□□□□ -0.2
CKS1B-202ENST00000368436 SNTB2Q13425 540 aaKnown RBP13.83□□□□□ -0.2
CKS1B-202ENST00000368436 DAG1Q14118 895 aa13.83□□□□□ -0.2
CKS1B-202ENST00000368436 OR1Q1Q15612 314 aa13.83□□□□□ -0.2
CKS1B-202ENST00000368436 CDK20Q8IZL9 346 aa13.83□□□□□ -0.2
CKS1B-202ENST00000368436 BHLHE22Q8NFJ8 381 aaPredicted RBP13.83□□□□□ -0.2
CKS1B-202ENST00000368436 CKAP2Q8WWK9 683 aa13.83□□□□□ -0.2
CKS1B-202ENST00000368436 HPS1Q92902 700 aa13.83□□□□□ -0.2
CKS1B-202ENST00000368436 TXNDC15Q96J42 360 aa13.83□□□□□ -0.2
CKS1B-202ENST00000368436 EPYCQ99645 322 aa13.83□□□□□ -0.2
CKS1B-202ENST00000368436 EMC6Q9BV81 110 aa13.83□□□□□ -0.2
CKS1B-202ENST00000368436 IKZF5Q9H5V7 419 aa13.83□□□□□ -0.2
CKS1B-202ENST00000368436 EVA1AQ9H8M9 152 aa13.83□□□□□ -0.2
CKS1B-202ENST00000368436 TMEM27Q9HBJ8 222 aa13.83□□□□□ -0.2
CKS1B-202ENST00000368436 NOX3Q9HBY0 568 aa13.83□□□□□ -0.2
CKS1B-202ENST00000368436 MRPL39Q9NYK5 338 aaKnown RBP13.83□□□□□ -0.2
CKS1B-202ENST00000368436 CCDC167Q9P0B6 97 aa13.83□□□□□ -0.2
CKS1B-202ENST00000368436 NOX1Q9Y5S8 564 aa13.83□□□□□ -0.2
CKS1B-202ENST00000368436 PRORSD1PA6NEY8 169 aa13.82□□□□□ -0.2
CKS1B-202ENST00000368436 POLR3GO15318 223 aaPredicted RBP13.82□□□□□ -0.2
CKS1B-202ENST00000368436 HLA-HP01893 362 aa13.82□□□□□ -0.2
CKS1B-202ENST00000368436 ZNF35P13682 527 aa13.82□□□□□ -0.2
CKS1B-202ENST00000368436 ZNF14P17017 642 aaPredicted RBP13.82□□□□□ -0.2
CKS1B-202ENST00000368436 CAPZA2P47755 286 aa13.82□□□□□ -0.2
CKS1B-202ENST00000368436 IDH3AP50213 366 aa13.82□□□□□ -0.2
CKS1B-202ENST00000368436 RGS8P57771 180 aaPredicted RBP13.82□□□□□ -0.2
CKS1B-202ENST00000368436 RIN1Q13671 783 aa13.82□□□□□ -0.2
CKS1B-202ENST00000368436 SCARB2Q14108 478 aa13.82□□□□□ -0.2
CKS1B-202ENST00000368436 SQLEQ14534 574 aa13.82□□□□□ -0.2
CKS1B-202ENST00000368436 ADRM1Q16186 407 aa13.82□□□□□ -0.2
CKS1B-202ENST00000368436 CR1LQ2VPA4 569 aa13.82□□□□□ -0.2
CKS1B-202ENST00000368436 CARD17Q5XLA6 110 aa13.82□□□□□ -0.2
CKS1B-202ENST00000368436 KRT80Q6KB66 452 aa13.82□□□□□ -0.2
CKS1B-202ENST00000368436 WDFY1Q8IWB7 410 aa13.82□□□□□ -0.2
CKS1B-202ENST00000368436 UBASH3BQ8TF42 649 aa13.82□□□□□ -0.2
CKS1B-202ENST00000368436 C1orf159Q96HA4 380 aa13.82□□□□□ -0.2
CKS1B-202ENST00000368436 MOGAT1Q96PD6 335 aa13.82□□□□□ -0.2
CKS1B-202ENST00000368436 EBF4Q9BQW3 602 aa13.82□□□□□ -0.2
CKS1B-202ENST00000368436 WFDC6Q9BQY6 131 aa13.82□□□□□ -0.2
CKS1B-202ENST00000368436 TMEM43Q9BTV4 400 aa13.82□□□□□ -0.2
CKS1B-202ENST00000368436 CCDC28BQ9BUN5 200 aa13.82□□□□□ -0.2
CKS1B-202ENST00000368436 C19orf24Q9BVV8 132 aa13.82□□□□□ -0.2
CKS1B-202ENST00000368436 ASPNQ9BXN1 380 aa13.82□□□□□ -0.2
CKS1B-202ENST00000368436 MED29Q9NX70 200 aa13.82□□□□□ -0.2
CKS1B-202ENST00000368436 SELENONQ9NZV5 590 aa13.82□□□□□ -0.2
CKS1B-202ENST00000368436 CMAHPQ9Y471 501 aa13.82□□□□□ -0.2
CKS1B-202ENST00000368436 SH3PXD2BA1X283 911 aa13.81□□□□□ -0.2
CKS1B-202ENST00000368436 PLPP3O14495 311 aa13.81□□□□□ -0.2
CKS1B-202ENST00000368436 SERPINB7O75635 380 aa13.81□□□□□ -0.2
CKS1B-202ENST00000368436 MFN2O95140 757 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms