RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 ADAM21Q9UKJ8 722 aa8.65□□□□□ -1.02
CD48-202ENST00000368046 A4GNTQ9UNA3 340 aa8.65□□□□□ -1.02
CD48-202ENST00000368046 MYO9AB2RTY4 2548 aa8.65□□□□□ -1.02
CD48-202ENST00000368046 SLC35F4A4IF30 521 aa8.64□□□□□ -1.03
CD48-202ENST00000368046 ZNF587BE7ETH6 402 aa8.64□□□□□ -1.03
CD48-202ENST00000368046 TRAF3IP2O43734 574 aaPredicted RBP8.64□□□□□ -1.03
CD48-202ENST00000368046 WNT11O96014 354 aa8.64□□□□□ -1.03
CD48-202ENST00000368046 IGHA1P01876 353 aa8.64□□□□□ -1.03
CD48-202ENST00000368046 NCK1P16333 377 aa8.64□□□□□ -1.03
CD48-202ENST00000368046 CDH2P19022 906 aaPredicted RBP8.64□□□□□ -1.03
CD48-202ENST00000368046 PTNP21246 168 aa8.64□□□□□ -1.03
CD48-202ENST00000368046 PTAFRP25105 342 aa8.64□□□□□ -1.03
CD48-202ENST00000368046 PRPS1P60891 318 aa8.64□□□□□ -1.03
CD48-202ENST00000368046 SLC25A3Q00325 362 aa8.64□□□□□ -1.03
CD48-202ENST00000368046 ROR2Q01974 943 aaKnown RBP8.64□□□□□ -1.03
CD48-202ENST00000368046 POU3F1Q03052 451 aaPredicted RBP8.64□□□□□ -1.03
CD48-202ENST00000368046 BSPH1Q075Z2 132 aa8.64□□□□□ -1.03
CD48-202ENST00000368046 SPATS1Q496A3 300 aa8.64□□□□□ -1.03
CD48-202ENST00000368046 IFI44LQ53G44 452 aa8.64□□□□□ -1.03
CD48-202ENST00000368046 HMBOX1Q6NT76 420 aa8.64□□□□□ -1.03
CD48-202ENST00000368046 KLHL17Q6TDP4 642 aa8.64□□□□□ -1.03
CD48-202ENST00000368046 C16orf89Q6UX73 402 aa8.64□□□□□ -1.03
CD48-202ENST00000368046 TMEM108Q6UXF1 575 aa8.64□□□□□ -1.03
CD48-202ENST00000368046 C20orf204Q6ZNR8 217 aa8.64□□□□□ -1.03
CD48-202ENST00000368046 VTCN1Q7Z7D3 282 aa8.64□□□□□ -1.03
CD48-202ENST00000368046 RNF113BQ8IZP6 322 aaKnown RBP8.64□□□□□ -1.03
CD48-202ENST00000368046 PGAM4Q8N0Y7 254 aa8.64□□□□□ -1.03
CD48-202ENST00000368046 GPR137CQ8N3F9 429 aa8.64□□□□□ -1.03
CD48-202ENST00000368046 LRRC17Q8N6Y2 441 aa8.64□□□□□ -1.03
CD48-202ENST00000368046 RNF148Q8N7C7 305 aa8.64□□□□□ -1.03
CD48-202ENST00000368046 OR1K1Q8NGR3 316 aa8.64□□□□□ -1.03
CD48-202ENST00000368046 LILRB1Q8NHL6 650 aaPredicted RBP8.64□□□□□ -1.03
CD48-202ENST00000368046 MAGEE2Q8TD90 523 aaPredicted RBP8.64□□□□□ -1.03
CD48-202ENST00000368046 TMEM255BQ8WV15 326 aa8.64□□□□□ -1.03
CD48-202ENST00000368046 LIPHQ8WWY8 451 aa8.64□□□□□ -1.03
CD48-202ENST00000368046 AKAP1Q92667 903 aaKnown RBP eCLIP8.64□□□□□ -1.03
CD48-202ENST00000368046 BCL2L2Q92843 193 aaPredicted RBP8.64□□□□□ -1.03
CD48-202ENST00000368046 FAM162AQ96A26 154 aa8.64□□□□□ -1.03
CD48-202ENST00000368046 NSL1Q96IY1 281 aa8.64□□□□□ -1.03
CD48-202ENST00000368046 RADILQ96JH8 1075 aa8.64□□□□□ -1.03
CD48-202ENST00000368046 ALPK1Q96QP1 1244 aa8.64□□□□□ -1.03
CD48-202ENST00000368046 OR2M2Q96R28 347 aa8.64□□□□□ -1.03
CD48-202ENST00000368046 EMC6Q9BV81 110 aa8.64□□□□□ -1.03
CD48-202ENST00000368046 FNDC11Q9BVV2 318 aa8.64□□□□□ -1.03
CD48-202ENST00000368046 OBP2BQ9NPH6 170 aa8.64□□□□□ -1.03
CD48-202ENST00000368046 DCAF13Q9NV06 445 aaKnown RBP8.64□□□□□ -1.03
CD48-202ENST00000368046 BEX4Q9NWD9 120 aaPredicted RBP8.64□□□□□ -1.03
CD48-202ENST00000368046 CD300AQ9UGN4 299 aa8.64□□□□□ -1.03
CD48-202ENST00000368046 EGFL7Q9UHF1 273 aa8.64□□□□□ -1.03
CD48-202ENST00000368046 MGAT4BQ9UQ53 548 aa8.64□□□□□ -1.03
CD48-202ENST00000368046 AMDHD2Q9Y303 409 aa8.64□□□□□ -1.03
CD48-202ENST00000368046 MED31Q9Y3C7 131 aa8.64□□□□□ -1.03
CD48-202ENST00000368046 RNF115Q9Y4L5 304 aa8.64□□□□□ -1.03
CD48-202ENST00000368046 MAGED1Q9Y5V3 778 aaPredicted RBP8.64□□□□□ -1.03
CD48-202ENST00000368046 SNX13Q9Y5W8 968 aa8.64□□□□□ -1.03
CD48-202ENST00000368046 HRNRQ86YZ3 2850 aaPredicted RBP8.64□□□□□ -1.03
CD48-202ENST00000368046 SPG11Q96JI7 2443 aa8.63□□□□□ -1.03
CD48-202ENST00000368046 A0A1W2PR80 420 aa8.63□□□□□ -1.03
CD48-202ENST00000368046 C11orf98E9PRG8 122 aa8.63□□□□□ -1.03
CD48-202ENST00000368046 BLOC1S5-TXNDC5H3BN57 136 aa8.63□□□□□ -1.03
CD48-202ENST00000368046 KPNA4O00629 521 aaPredicted RBP8.63□□□□□ -1.03
CD48-202ENST00000368046 HS3ST1O14792 307 aa8.63□□□□□ -1.03
CD48-202ENST00000368046 CLOCKO15516 846 aa8.63□□□□□ -1.03
CD48-202ENST00000368046 RNF13O43567 381 aa8.63□□□□□ -1.03
CD48-202ENST00000368046 TMCC2O75069 709 aa8.63□□□□□ -1.03
CD48-202ENST00000368046 UMPSP11172 480 aa8.63□□□□□ -1.03
CD48-202ENST00000368046 HSD17B1P14061 328 aa8.63□□□□□ -1.03
CD48-202ENST00000368046 HOXC12P31275 282 aa8.63□□□□□ -1.03
CD48-202ENST00000368046 YAP1P46937 504 aaKnown RBP8.63□□□□□ -1.03
CD48-202ENST00000368046 ZNF83P51522 516 aa8.63□□□□□ -1.03
CD48-202ENST00000368046 UGT2B15P54855 530 aa8.63□□□□□ -1.03
CD48-202ENST00000368046 SH3BGRP55822 239 aaPredicted RBP8.63□□□□□ -1.03
CD48-202ENST00000368046 ARF1P84077 181 aaKnown RBP8.63□□□□□ -1.03
CD48-202ENST00000368046 LGALS3BPQ08380 585 aa8.63□□□□□ -1.03
CD48-202ENST00000368046 FOXD4Q12950 439 aaPredicted RBP8.63□□□□□ -1.03
CD48-202ENST00000368046 FXNQ16595 210 aa8.63□□□□□ -1.03
CD48-202ENST00000368046 SAMD4BQ5PRF9 694 aaKnown RBP8.63□□□□□ -1.03
CD48-202ENST00000368046 ANKRD16Q6P6B7 361 aa8.63□□□□□ -1.03
CD48-202ENST00000368046 SLC35D2Q76EJ3 337 aa8.63□□□□□ -1.03
CD48-202ENST00000368046 LINGO2Q7L985 606 aa8.63□□□□□ -1.03
CD48-202ENST00000368046 SLC46A3Q7Z3Q1 461 aa8.63□□□□□ -1.03
CD48-202ENST00000368046 C20orf196Q8IYI0 205 aa8.63□□□□□ -1.03
CD48-202ENST00000368046 TMEM123Q8N131 208 aa8.63□□□□□ -1.03
CD48-202ENST00000368046 DEPDC4Q8N2C3 294 aa8.63□□□□□ -1.03
CD48-202ENST00000368046 CCDC197Q8NCU1 140 aa8.63□□□□□ -1.03
CD48-202ENST00000368046 OR6X1Q8NH79 312 aa8.63□□□□□ -1.03
CD48-202ENST00000368046 GEMIN6Q8WXD5 167 aaKnown RBP8.63□□□□□ -1.03
CD48-202ENST00000368046 SGTBQ96EQ0 304 aa8.63□□□□□ -1.03
CD48-202ENST00000368046 HSH2DQ96JZ2 352 aa8.63□□□□□ -1.03
CD48-202ENST00000368046 PRRC1Q96M27 445 aa8.63□□□□□ -1.03
CD48-202ENST00000368046 ADAD1Q96M93 576 aaKnown RBP8.63□□□□□ -1.03
CD48-202ENST00000368046 C1QTNF6Q9BXI9 259 aa8.63□□□□□ -1.03
CD48-202ENST00000368046 CRLF2Q9HC73 371 aa8.63□□□□□ -1.03
CD48-202ENST00000368046 GPR35Q9HC97 309 aa8.63□□□□□ -1.03
CD48-202ENST00000368046 MED29Q9NX70 200 aa8.63□□□□□ -1.03
CD48-202ENST00000368046 NPAP1Q9NZP6 1156 aa8.63□□□□□ -1.03
CD48-202ENST00000368046 SAMD4AQ9UPU9 718 aaKnown RBP8.63□□□□□ -1.03
CD48-202ENST00000368046 B2RBV5 119 aa8.62□□□□□ -1.03
CD48-202ENST00000368046 J3KTA2 159 aa8.62□□□□□ -1.03
CD48-202ENST00000368046 M0R1B8 84 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms