RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 ERLIN1O75477 346 aa12.34□□□□□ -0.43
VAMP4-202ENST00000367740 CSF1P09603 554 aa12.34□□□□□ -0.43
VAMP4-202ENST00000367740 ZNF250P15622 560 aa12.34□□□□□ -0.43
VAMP4-202ENST00000367740 MATN1P21941 496 aa12.34□□□□□ -0.43
VAMP4-202ENST00000367740 CD80P33681 288 aa12.34□□□□□ -0.43
VAMP4-202ENST00000367740 SOAT1P35610 550 aa12.34□□□□□ -0.43
VAMP4-202ENST00000367740 HPCAL1P37235 193 aa12.34□□□□□ -0.43
VAMP4-202ENST00000367740 GIPRP48546 466 aa12.34□□□□□ -0.43
VAMP4-202ENST00000367740 ERVS71-1P61550 626 aa12.34□□□□□ -0.43
VAMP4-202ENST00000367740 KCNJ10P78508 379 aa12.34□□□□□ -0.43
VAMP4-202ENST00000367740 CAV1Q03135 178 aa12.34□□□□□ -0.43
VAMP4-202ENST00000367740 PAX8Q06710 450 aa12.34□□□□□ -0.43
VAMP4-202ENST00000367740 PHYHD1Q5SRE7 291 aa12.34□□□□□ -0.43
VAMP4-202ENST00000367740 RUSC1-AS1Q66K80 236 aa12.34□□□□□ -0.43
VAMP4-202ENST00000367740 FRRS1Q6ZNA5 592 aa12.34□□□□□ -0.43
VAMP4-202ENST00000367740 ZNF584Q8IVC4 421 aa12.34□□□□□ -0.43
VAMP4-202ENST00000367740 UPRTQ96BW1 309 aa12.34□□□□□ -0.43
VAMP4-202ENST00000367740 PAFAH2Q99487 392 aa12.34□□□□□ -0.43
VAMP4-202ENST00000367740 SLC30A2Q9BRI3 323 aa12.34□□□□□ -0.43
VAMP4-202ENST00000367740 TAPBPLQ9BX59 468 aa12.34□□□□□ -0.43
VAMP4-202ENST00000367740 DYNC2H1Q8NCM8 4307 aaKnown RBP12.34□□□□□ -0.43
VAMP4-202ENST00000367740 H0YL77 283 aa12.33□□□□□ -0.44
VAMP4-202ENST00000367740 SLC28A1O00337 649 aa12.33□□□□□ -0.44
VAMP4-202ENST00000367740 FAAHO00519 579 aa12.33□□□□□ -0.44
VAMP4-202ENST00000367740 ZNF500O60304 480 aaPredicted RBP12.33□□□□□ -0.44
VAMP4-202ENST00000367740 CRCPO75575 148 aa12.33□□□□□ -0.44
VAMP4-202ENST00000367740 UBOX5O94941 541 aa12.33□□□□□ -0.44
VAMP4-202ENST00000367740 OPN1MWP04001 364 aa12.33□□□□□ -0.44
VAMP4-202ENST00000367740 GUSBP08236 651 aa12.33□□□□□ -0.44
VAMP4-202ENST00000367740 FAM157BP0CG42 384 aa12.33□□□□□ -0.44
VAMP4-202ENST00000367740 PPIAL4GP0DN37 164 aa12.33□□□□□ -0.44
VAMP4-202ENST00000367740 OPN1MW2P0DN77 364 aa12.33□□□□□ -0.44
VAMP4-202ENST00000367740 OPN1MW3P0DN78 364 aa12.33□□□□□ -0.44
VAMP4-202ENST00000367740 SLC6A9P48067 706 aa12.33□□□□□ -0.44
VAMP4-202ENST00000367740 SERPINB9P50453 376 aa12.33□□□□□ -0.44
VAMP4-202ENST00000367740 SELENOVP59797 346 aa12.33□□□□□ -0.44
VAMP4-202ENST00000367740 BNIP2Q12982 314 aa12.33□□□□□ -0.44
VAMP4-202ENST00000367740 RAB39AQ14964 217 aa12.33□□□□□ -0.44
VAMP4-202ENST00000367740 FAM205BPQ63HN1 556 aa12.33□□□□□ -0.44
VAMP4-202ENST00000367740 CLEC6AQ6EIG7 209 aa12.33□□□□□ -0.44
VAMP4-202ENST00000367740 BRD3OSQ6XYD6 125 aa12.33□□□□□ -0.44
VAMP4-202ENST00000367740 TMEM123Q8N131 208 aa12.33□□□□□ -0.44
VAMP4-202ENST00000367740 CLEC4FQ8N1N0 589 aa12.33□□□□□ -0.44
VAMP4-202ENST00000367740 CCNYL1Q8N7R7 359 aa12.33□□□□□ -0.44
VAMP4-202ENST00000367740 SYNPRQ8TBG9 265 aa12.33□□□□□ -0.44
VAMP4-202ENST00000367740 SLC35G5Q96KT7 338 aa12.33□□□□□ -0.44
VAMP4-202ENST00000367740 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.33□□□□□ -0.44
VAMP4-202ENST00000367740 AURKAIP1Q9NWT8 199 aaPredicted RBP12.33□□□□□ -0.44
VAMP4-202ENST00000367740 SLCO1C1Q9NYB5 712 aa12.33□□□□□ -0.44
VAMP4-202ENST00000367740 B3GAT1Q9P2W7 334 aa12.33□□□□□ -0.44
VAMP4-202ENST00000367740 SLC22A23A1A5C7 686 aa12.32□□□□□ -0.44
VAMP4-202ENST00000367740 M0R3G1 203 aa12.32□□□□□ -0.44
VAMP4-202ENST00000367740 LSM1O15116 133 aaKnown RBP12.32□□□□□ -0.44
VAMP4-202ENST00000367740 RAB36O95755 333 aa12.32□□□□□ -0.44
VAMP4-202ENST00000367740 IGHV2-70P01814 119 aa12.32□□□□□ -0.44
VAMP4-202ENST00000367740 OR8G3PP0DMU2 310 aa12.32□□□□□ -0.44
VAMP4-202ENST00000367740 UROSP10746 265 aa12.32□□□□□ -0.44
VAMP4-202ENST00000367740 CXCR1P25024 350 aa12.32□□□□□ -0.44
VAMP4-202ENST00000367740 PHBP35232 272 aa12.32□□□□□ -0.44
VAMP4-202ENST00000367740 RAB1AP62820 205 aa12.32□□□□□ -0.44
VAMP4-202ENST00000367740 HBA1P69905 142 aa12.32□□□□□ -0.44
VAMP4-202ENST00000367740 GLO1Q04760 184 aa12.32□□□□□ -0.44
VAMP4-202ENST00000367740 LSM12Q3MHD2 195 aaKnown RBP12.32□□□□□ -0.44
VAMP4-202ENST00000367740 Q6YL49 198 aa12.32□□□□□ -0.44
VAMP4-202ENST00000367740 ZNF813Q6ZN06 617 aa12.32□□□□□ -0.44
VAMP4-202ENST00000367740 FRMD7Q6ZUT3 714 aa12.32□□□□□ -0.44
VAMP4-202ENST00000367740 ZNF627Q7L945 461 aa12.32□□□□□ -0.44
VAMP4-202ENST00000367740 C6orf120Q7Z4R8 191 aa12.32□□□□□ -0.44
VAMP4-202ENST00000367740 PAQR4Q8N4S7 273 aaPredicted RBP12.32□□□□□ -0.44
VAMP4-202ENST00000367740 OR2M2Q96R28 347 aa12.32□□□□□ -0.44
VAMP4-202ENST00000367740 DIRC2Q96SL1 478 aa12.32□□□□□ -0.44
VAMP4-202ENST00000367740 PRPF18Q99633 342 aaKnown RBP12.32□□□□□ -0.44
VAMP4-202ENST00000367740 OR51B6Q9H340 312 aa12.32□□□□□ -0.44
VAMP4-202ENST00000367740 OR51I1Q9H343 314 aa12.32□□□□□ -0.44
VAMP4-202ENST00000367740 PATZ1Q9HBE1 687 aaKnown RBP12.32□□□□□ -0.44
VAMP4-202ENST00000367740 POLE3Q9NRF9 147 aa12.32□□□□□ -0.44
VAMP4-202ENST00000367740 EXD2Q9NVH0 621 aa12.32□□□□□ -0.44
VAMP4-202ENST00000367740 DCAF16Q9NXF7 216 aa12.32□□□□□ -0.44
VAMP4-202ENST00000367740 NINJ2Q9NZG7 142 aa12.32□□□□□ -0.44
VAMP4-202ENST00000367740 TMED5Q9Y3A6 229 aa12.32□□□□□ -0.44
VAMP4-202ENST00000367740 TM9SF1O15321 606 aa12.31□□□□□ -0.44
VAMP4-202ENST00000367740 PIP5K1CO60331 668 aa12.31□□□□□ -0.44
VAMP4-202ENST00000367740 GSTA1P08263 222 aa12.31□□□□□ -0.44
VAMP4-202ENST00000367740 MYZAPP0CAP1 466 aa12.31□□□□□ -0.44
VAMP4-202ENST00000367740 PNMTP11086 282 aa12.31□□□□□ -0.44
VAMP4-202ENST00000367740 B4GALT1P15291 398 aa12.31□□□□□ -0.44
VAMP4-202ENST00000367740 ZNF43P17038 809 aa12.31□□□□□ -0.44
VAMP4-202ENST00000367740 LSP1P33241 339 aa12.31□□□□□ -0.44
VAMP4-202ENST00000367740 RPL15P61313 204 aaKnown RBP12.31□□□□□ -0.44
VAMP4-202ENST00000367740 PAX2Q02962 417 aa12.31□□□□□ -0.44
VAMP4-202ENST00000367740 SLC3A1Q07837 685 aa12.31□□□□□ -0.44
VAMP4-202ENST00000367740 EPS8Q12929 822 aa12.31□□□□□ -0.44
VAMP4-202ENST00000367740 FAM209AQ5JX71 171 aa12.31□□□□□ -0.44
VAMP4-202ENST00000367740 C1orf140Q5VVS0 124 aa12.31□□□□□ -0.44
VAMP4-202ENST00000367740 ZNF620Q6ZNG0 422 aa12.31□□□□□ -0.44
VAMP4-202ENST00000367740 TMEM86BQ8N661 226 aa12.31□□□□□ -0.44
VAMP4-202ENST00000367740 PIK3C3Q8NEB9 887 aa12.31□□□□□ -0.44
VAMP4-202ENST00000367740 OR10S1Q8NGN2 331 aa12.31□□□□□ -0.44
VAMP4-202ENST00000367740 ROPN1LQ96C74 230 aa12.31□□□□□ -0.44
VAMP4-202ENST00000367740 FUT8Q9BYC5 575 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms