RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 LRIT2A6NDA9 550 aa17.42■□□□□ 0.38
CMTM3-201ENST00000361909 POM121BA6NF01 834 aa17.42■□□□□ 0.38
CMTM3-201ENST00000361909 H7C417 338 aa17.42■□□□□ 0.38
CMTM3-201ENST00000361909 ZNF254O75437 659 aa17.42■□□□□ 0.38
CMTM3-201ENST00000361909 RBBP9O75884 186 aa17.42■□□□□ 0.38
CMTM3-201ENST00000361909 IGF2P01344 180 aa17.42■□□□□ 0.38
CMTM3-201ENST00000361909 MELTFP08582 738 aa17.42■□□□□ 0.38
CMTM3-201ENST00000361909 CDK2P24941 298 aa17.42■□□□□ 0.38
CMTM3-201ENST00000361909 AKT2P31751 481 aa17.42■□□□□ 0.38
CMTM3-201ENST00000361909 RFC3P40938 356 aa17.42■□□□□ 0.38
CMTM3-201ENST00000361909 PDX1P52945 283 aa17.42■□□□□ 0.38
CMTM3-201ENST00000361909 DUSP8Q13202 625 aa17.42■□□□□ 0.38
CMTM3-201ENST00000361909 NFATC4Q14934 902 aa17.42■□□□□ 0.38
CMTM3-201ENST00000361909 LTB4RQ15722 352 aa17.42■□□□□ 0.38
CMTM3-201ENST00000361909 CSRP2Q16527 193 aa17.42■□□□□ 0.38
CMTM3-201ENST00000361909 LPCAT3Q6P1A2 487 aa17.42■□□□□ 0.38
CMTM3-201ENST00000361909 SLC48A1Q6P1K1 146 aa17.42■□□□□ 0.38
CMTM3-201ENST00000361909 C11orf88Q6PI97 169 aa17.42■□□□□ 0.38
CMTM3-201ENST00000361909 ZNF793Q6ZN11 406 aa17.42■□□□□ 0.38
CMTM3-201ENST00000361909 CCDC116Q8IYX3 515 aa17.42■□□□□ 0.38
CMTM3-201ENST00000361909 KCNRGQ8N5I3 272 aa17.42■□□□□ 0.38
CMTM3-201ENST00000361909 OR52B4Q8NGK2 314 aa17.42■□□□□ 0.38
CMTM3-201ENST00000361909 BMFQ96LC9 184 aa17.42■□□□□ 0.38
CMTM3-201ENST00000361909 GFI1Q99684 422 aa17.42■□□□□ 0.38
CMTM3-201ENST00000361909 MBD2Q9UBB5 411 aa17.42■□□□□ 0.38
CMTM3-201ENST00000361909 CTSFQ9UBX1 484 aa17.42■□□□□ 0.38
CMTM3-201ENST00000361909 MTFP1Q9UDX5 166 aa17.42■□□□□ 0.38
CMTM3-201ENST00000361909 KANTRA0A1W2PQU2 76 aa17.41■□□□□ 0.38
CMTM3-201ENST00000361909 NUDT19A8MXV4 375 aa17.41■□□□□ 0.38
CMTM3-201ENST00000361909 GLSO94925 669 aaPredicted RBP17.41■□□□□ 0.38
CMTM3-201ENST00000361909 SLC35G4P0C7Q5 338 aa17.41■□□□□ 0.38
CMTM3-201ENST00000361909 PVALBP20472 110 aaPredicted RBP17.41■□□□□ 0.38
CMTM3-201ENST00000361909 NOS3P29474 1203 aa17.41■□□□□ 0.38
CMTM3-201ENST00000361909 EEF1A1P68104 462 aaKnown RBP17.41■□□□□ 0.38
CMTM3-201ENST00000361909 TFF2Q03403 129 aa17.41■□□□□ 0.38
CMTM3-201ENST00000361909 LIN54Q6MZP7 749 aa17.41■□□□□ 0.38
CMTM3-201ENST00000361909 AMER3Q8N944 861 aa17.41■□□□□ 0.38
CMTM3-201ENST00000361909 BPIFA2Q96DR5 249 aa17.41■□□□□ 0.38
CMTM3-201ENST00000361909 MS4A4EQ96PG1 132 aa17.41■□□□□ 0.38
CMTM3-201ENST00000361909 UPB1Q9UBR1 384 aa17.41■□□□□ 0.38
CMTM3-201ENST00000361909 GPN3Q9UHW5 284 aaPredicted RBP17.41■□□□□ 0.38
CMTM3-201ENST00000361909 PLAGL1Q9UM63 463 aa17.41■□□□□ 0.38
CMTM3-201ENST00000361909 ICAM5Q9UMF0 924 aa17.41■□□□□ 0.38
CMTM3-201ENST00000361909 ACOD1A6NK06 481 aa17.4■□□□□ 0.38
CMTM3-201ENST00000361909 TNFRSF10CO14798 259 aa17.4■□□□□ 0.38
CMTM3-201ENST00000361909 RAD1O60671 282 aa17.4■□□□□ 0.38
CMTM3-201ENST00000361909 ZNF217O75362 1048 aa17.4■□□□□ 0.38
CMTM3-201ENST00000361909 ZIC2O95409 532 aaPredicted RBP17.4■□□□□ 0.38
CMTM3-201ENST00000361909 CD8AP01732 235 aa17.4■□□□□ 0.38
CMTM3-201ENST00000361909 F3P13726 295 aa17.4■□□□□ 0.38
CMTM3-201ENST00000361909 SLC6A6P31641 620 aa17.4■□□□□ 0.38
CMTM3-201ENST00000361909 MC3RP41968 323 aa17.4■□□□□ 0.38
CMTM3-201ENST00000361909 TSFMP43897 325 aaKnown RBP17.4■□□□□ 0.38
CMTM3-201ENST00000361909 SORDQ00796 357 aa17.4■□□□□ 0.38
CMTM3-201ENST00000361909 ZP2Q05996 745 aa17.4■□□□□ 0.38
CMTM3-201ENST00000361909 DHRS7BQ6IAN0 325 aaPredicted RBP17.4■□□□□ 0.38
CMTM3-201ENST00000361909 THSD4Q6ZMP0 1018 aa17.4■□□□□ 0.38
CMTM3-201ENST00000361909 MUC20Q8N307 709 aaPredicted RBP17.4■□□□□ 0.38
CMTM3-201ENST00000361909 TSTD1Q8NFU3 115 aa17.4■□□□□ 0.38
CMTM3-201ENST00000361909 OR4D10Q8NGI6 311 aa17.4■□□□□ 0.38
CMTM3-201ENST00000361909 SNX33Q8WV41 574 aa17.4■□□□□ 0.38
CMTM3-201ENST00000361909 PRAP1Q96NZ9 151 aa17.4■□□□□ 0.38
CMTM3-201ENST00000361909 C1orf198Q9H425 327 aa17.4■□□□□ 0.38
CMTM3-201ENST00000361909 OR5V1Q9UGF6 321 aa17.4■□□□□ 0.38
CMTM3-201ENST00000361909 CES1P1Q9UKY3 287 aa17.4■□□□□ 0.38
CMTM3-201ENST00000361909 ZNF281Q9Y2X9 895 aa17.4■□□□□ 0.38
CMTM3-201ENST00000361909 MED31Q9Y3C7 131 aa17.4■□□□□ 0.38
CMTM3-201ENST00000361909 WDR45Q9Y484 360 aa17.4■□□□□ 0.38
CMTM3-201ENST00000361909 PRSS38A1L453 326 aa17.4■□□□□ 0.38
CMTM3-201ENST00000361909 BCL2L11O43521 198 aa17.4■□□□□ 0.38
CMTM3-201ENST00000361909 HIST1H1TP22492 207 aaPredicted RBP17.4■□□□□ 0.38
CMTM3-201ENST00000361909 NDUFS1P28331 727 aa17.4■□□□□ 0.38
CMTM3-201ENST00000361909 KIAA0895LQ68EN5 471 aa17.4■□□□□ 0.38
CMTM3-201ENST00000361909 RAB42Q8N4Z0 105 aa17.4■□□□□ 0.38
CMTM3-201ENST00000361909 WDR92Q96MX6 357 aa17.4■□□□□ 0.38
CMTM3-201ENST00000361909 ENKD1Q9H0I2 346 aa17.4■□□□□ 0.38
CMTM3-201ENST00000361909 APMAPQ9HDC9 416 aa17.4■□□□□ 0.38
CMTM3-201ENST00000361909 WSB2Q9NYS7 404 aaPredicted RBP17.4■□□□□ 0.38
CMTM3-201ENST00000361909 FBXL21Q9UKT6 434 aa17.4■□□□□ 0.38
CMTM3-201ENST00000361909 NOSIPQ9Y314 301 aaKnown RBP17.4■□□□□ 0.38
CMTM3-201ENST00000361909 PMS2P2O95744 297 aa17.39■□□□□ 0.37
CMTM3-201ENST00000361909 AIFM1O95831 613 aa17.39■□□□□ 0.37
CMTM3-201ENST00000361909 RLN1P04808 185 aa17.39■□□□□ 0.37
CMTM3-201ENST00000361909 CLDN2P57739 230 aa17.39■□□□□ 0.37
CMTM3-201ENST00000361909 CSNK1G2P78368 415 aa17.39■□□□□ 0.37
CMTM3-201ENST00000361909 SRSF4Q08170 494 aaKnown RBP17.39■□□□□ 0.37
CMTM3-201ENST00000361909 ARHGAP11BQ3KRB8 267 aa17.39■□□□□ 0.37
CMTM3-201ENST00000361909 ZNF528Q3MIS6 628 aa17.39■□□□□ 0.37
CMTM3-201ENST00000361909 FAAP20Q6NZ36 180 aa17.39■□□□□ 0.37
CMTM3-201ENST00000361909 SLC35F2Q8IXU6 374 aa17.39■□□□□ 0.37
CMTM3-201ENST00000361909 C2orf73Q8N5S3 287 aaPredicted RBP17.39■□□□□ 0.37
CMTM3-201ENST00000361909 RELL2Q8NC24 303 aaPredicted RBP17.39■□□□□ 0.37
CMTM3-201ENST00000361909 OR4C16Q8NGL9 310 aa17.39■□□□□ 0.37
CMTM3-201ENST00000361909 OR13C2Q8NGS9 318 aa17.39■□□□□ 0.37
CMTM3-201ENST00000361909 PFN4Q8NHR9 129 aa17.39■□□□□ 0.37
CMTM3-201ENST00000361909 MYOZ1Q9NP98 299 aaPredicted RBP17.39■□□□□ 0.37
CMTM3-201ENST00000361909 SERTAD3Q9UJW9 196 aa17.39■□□□□ 0.37
CMTM3-201ENST00000361909 A0A1W2PR48 441 aa17.39■□□□□ 0.37
CMTM3-201ENST00000361909 PRAMEF26H0Y7S4 382 aa17.39■□□□□ 0.37
CMTM3-201ENST00000361909 PIN1P1O15428 100 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms