RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 PIWIL3Q7Z3Z3 882 aaKnown RBP8.66□□□□□ -1.02
VPS13A-203ENST00000360280 OR51B6Q9H340 312 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 WDR76Q9H967 626 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 GMPR2Q9P2T1 348 aaKnown RBP8.66□□□□□ -1.02
VPS13A-203ENST00000360280 OR13C7P0DN81 318 aa8.65□□□□□ -1.02
VPS13A-203ENST00000360280 ZNF91Q05481 1191 aa8.65□□□□□ -1.02
VPS13A-203ENST00000360280 SLC36A2Q495M3 483 aa8.65□□□□□ -1.02
VPS13A-203ENST00000360280 NMES1Q9C002 83 aa8.65□□□□□ -1.02
VPS13A-203ENST00000360280 HSD3B7Q9H2F3 369 aa8.65□□□□□ -1.02
VPS13A-203ENST00000360280 RNF24Q9Y225 148 aa8.65□□□□□ -1.02
VPS13A-203ENST00000360280 PDGFBP01127 241 aaPredicted RBP8.65□□□□□ -1.02
VPS13A-203ENST00000360280 KHSRPQ92945 711 aaKnown RBP eCLIP8.65□□□□□ -1.021e-6■■■□□ 18
VPS13A-203ENST00000360280 FOXJ1Q92949 421 aa8.65□□□□□ -1.02
VPS13A-203ENST00000360280 TMIGD2Q96BF3 282 aa8.65□□□□□ -1.02
VPS13A-203ENST00000360280 SLC30A3Q99726 388 aa8.65□□□□□ -1.02
VPS13A-203ENST00000360280 CACFD1Q9UGQ2 172 aa8.65□□□□□ -1.02
VPS13A-203ENST00000360280 TMEM88BA6NKF7 163 aa8.65□□□□□ -1.02
VPS13A-203ENST00000360280 SLC16A7O60669 478 aa8.65□□□□□ -1.02
VPS13A-203ENST00000360280 C5AR1P21730 350 aa8.65□□□□□ -1.02
VPS13A-203ENST00000360280 TRNP1Q6NT89 227 aa8.65□□□□□ -1.02
VPS13A-203ENST00000360280 ADAM5Q6NVV9 412 aa8.65□□□□□ -1.02
VPS13A-203ENST00000360280 OVCH1Q7RTY7 1134 aa8.65□□□□□ -1.02
VPS13A-203ENST00000360280 AKR1E2Q96JD6 320 aa8.65□□□□□ -1.02
VPS13A-203ENST00000360280 FBXO8Q9NRD0 319 aa8.65□□□□□ -1.02
VPS13A-203ENST00000360280 SH3BGRL2Q9UJC5 107 aa8.65□□□□□ -1.02
VPS13A-203ENST00000360280 TCRBV3S1A0A5B6 114 aa8.65□□□□□ -1.02
VPS13A-203ENST00000360280 PRAMEF4O60810 478 aa8.65□□□□□ -1.02
VPS13A-203ENST00000360280 OR2F2O95006 317 aa8.65□□□□□ -1.02
VPS13A-203ENST00000360280 C21orf33P30042 268 aaPredicted RBP8.65□□□□□ -1.02
VPS13A-203ENST00000360280 SPINT3P49223 89 aa8.65□□□□□ -1.02
VPS13A-203ENST00000360280 REEP5Q00765 189 aa8.65□□□□□ -1.02
VPS13A-203ENST00000360280 OR2F1Q13607 317 aa8.65□□□□□ -1.02
VPS13A-203ENST00000360280 SLC35D2Q76EJ3 337 aa8.65□□□□□ -1.02
VPS13A-203ENST00000360280 ACVR1CQ8NER5 493 aa8.65□□□□□ -1.02
VPS13A-203ENST00000360280 DECR2Q9NUI1 292 aa8.65□□□□□ -1.02
VPS13A-203ENST00000360280 TRAV27A0A087WT01 109 aa8.65□□□□□ -1.02
VPS13A-203ENST00000360280 GIPP09681 153 aaPredicted RBP8.65□□□□□ -1.02
VPS13A-203ENST00000360280 HLA-FP30511 346 aa8.65□□□□□ -1.02
VPS13A-203ENST00000360280 LGI3Q8N145 548 aa8.65□□□□□ -1.02
VPS13A-203ENST00000360280 ASB11Q8WXH4 323 aa8.65□□□□□ -1.02
VPS13A-203ENST00000360280 SERTM2A0A1B0GWG4 89 aa8.65□□□□□ -1.02
VPS13A-203ENST00000360280 SOCS6O14544 535 aa8.65□□□□□ -1.02
VPS13A-203ENST00000360280 KLF8O95600 359 aaPredicted RBP8.65□□□□□ -1.02
VPS13A-203ENST00000360280 OR2T7P0C7T2 308 aa8.65□□□□□ -1.02
VPS13A-203ENST00000360280 ZNF888P0CJ79 500 aaPredicted RBP8.65□□□□□ -1.02
VPS13A-203ENST00000360280 OR5H8P0DN80 308 aa8.65□□□□□ -1.02
VPS13A-203ENST00000360280 CCKARP32238 428 aa8.65□□□□□ -1.02
VPS13A-203ENST00000360280 KCMF1Q9P0J7 381 aa8.65□□□□□ -1.02
VPS13A-203ENST00000360280 AK3Q9UIJ7 227 aa8.65□□□□□ -1.02
VPS13A-203ENST00000360280 ERVPABLB-1P60509 514 aa8.65□□□□□ -1.02
VPS13A-203ENST00000360280 ETFRF1Q6IPR1 90 aa8.65□□□□□ -1.02
VPS13A-203ENST00000360280 OR4F5Q8NH21 305 aa8.65□□□□□ -1.02
VPS13A-203ENST00000360280 OR4F4Q96R69 305 aa8.65□□□□□ -1.02
VPS13A-203ENST00000360280 CABLES2Q9BTV7 478 aa8.65□□□□□ -1.02
VPS13A-203ENST00000360280 BOCQ9BWV1 1114 aa8.65□□□□□ -1.02
VPS13A-203ENST00000360280 UBQLN4Q9NRR5 601 aa8.65□□□□□ -1.02
VPS13A-203ENST00000360280 VAPAQ9P0L0 249 aa8.65□□□□□ -1.02
VPS13A-203ENST00000360280 RGPD5Q99666 1765 aa8.65□□□□□ -1.03
VPS13A-203ENST00000360280 OR2M5A3KFT3 312 aa8.65□□□□□ -1.03
VPS13A-203ENST00000360280 CNIH1O95406 144 aa8.65□□□□□ -1.03
VPS13A-203ENST00000360280 HAPLN1P10915 354 aaPredicted RBP8.65□□□□□ -1.03
VPS13A-203ENST00000360280 OR8B8Q15620 311 aa8.65□□□□□ -1.03
VPS13A-203ENST00000360280 GRASPQ7Z6J2 395 aaPredicted RBP8.65□□□□□ -1.03
VPS13A-203ENST00000360280 GLIS1Q8NBF1 620 aa8.65□□□□□ -1.03
VPS13A-203ENST00000360280 NKX6-3A6NJ46 265 aa8.65□□□□□ -1.03
VPS13A-203ENST00000360280 DBX1A6NMT0 343 aa8.65□□□□□ -1.03
VPS13A-203ENST00000360280 AQP9O43315 295 aa8.65□□□□□ -1.03
VPS13A-203ENST00000360280 BTG1P62324 171 aa8.65□□□□□ -1.03
VPS13A-203ENST00000360280 ZXDBP98169 803 aa8.65□□□□□ -1.03
VPS13A-203ENST00000360280 OPN5Q6U736 354 aa8.65□□□□□ -1.03
VPS13A-203ENST00000360280 FAM57BQ71RH2 274 aa8.65□□□□□ -1.03
VPS13A-203ENST00000360280 TCTN2Q96GX1 697 aa8.65□□□□□ -1.03
VPS13A-203ENST00000360280 SLC12A9Q9BXP2 914 aa8.65□□□□□ -1.03
VPS13A-203ENST00000360280 DDOSTP39656 456 aa8.65□□□□□ -1.03
VPS13A-203ENST00000360280 TEKQ02763 1124 aa8.65□□□□□ -1.03
VPS13A-203ENST00000360280 GPR17Q13304 367 aa8.65□□□□□ -1.03
VPS13A-203ENST00000360280 LY6G5CQ5SRR4 150 aa8.65□□□□□ -1.03
VPS13A-203ENST00000360280 FAM182AQ5T1J6 154 aa8.65□□□□□ -1.03
VPS13A-203ENST00000360280 OR4F15Q8NGB8 312 aa8.65□□□□□ -1.03
VPS13A-203ENST00000360280 PCED1AQ9H1Q7 454 aa8.65□□□□□ -1.03
VPS13A-203ENST00000360280 GTDC1Q4AE62 458 aa8.65□□□□□ -1.03
VPS13A-203ENST00000360280 DGAT2L6Q6ZPD8 337 aa8.65□□□□□ -1.03
VPS13A-203ENST00000360280 MOB3CQ70IA8 216 aa8.65□□□□□ -1.03
VPS13A-203ENST00000360280 MMP21Q8N119 569 aa8.65□□□□□ -1.03
VPS13A-203ENST00000360280 DMRT3Q9NQL9 472 aa8.65□□□□□ -1.03
VPS13A-203ENST00000360280 N4BP2Q86UW6 1770 aaPredicted RBP8.64□□□□□ -1.03
VPS13A-203ENST00000360280 LOC100289279A0A1B0GTE1 492 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 TEX50A0A1B0GTY4 177 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 C4orf47A7E2U8 309 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 ZNF626Q68DY1 528 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 CNEP1R1Q8N9A8 125 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 TMEM104Q8NE00 496 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 SLC35E1Q96K37 410 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 LRRC37A3O60309 1634 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 ADIPOR2Q86V24 386 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 Q6ZTK2 550 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 A0A0J9YY10 115 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 MMP7P09237 267 aaPredicted RBP8.64□□□□□ -1.03
VPS13A-203ENST00000360280 MAOBP27338 520 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 RTL8BQ17RB0 113 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms