RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 NUDT22Q9BRQ3 303 aa13.74□□□□□ -0.21
CHD4-201ENST00000357008 RAB22AQ9UL26 194 aa13.74□□□□□ -0.21
CHD4-201ENST00000357008 TRAV36DV7A0A075B6V5 113 aa13.74□□□□□ -0.21
CHD4-201ENST00000357008 ZNF740Q8NDX6 193 aa13.74□□□□□ -0.21
CHD4-201ENST00000357008 WDR83Q9BRX9 315 aaKnown RBP13.74□□□□□ -0.21
CHD4-201ENST00000357008 EPHX3Q9H6B9 360 aa13.74□□□□□ -0.21
CHD4-201ENST00000357008 TRBV11-1A0A0K0K1C0 115 aa13.73□□□□□ -0.21
CHD4-201ENST00000357008 C17orf112F2Z3M2 114 aa13.73□□□□□ -0.21
CHD4-201ENST00000357008 OR1D4P47884 311 aa13.73□□□□□ -0.21
CHD4-201ENST00000357008 CASP6P55212 293 aa13.73□□□□□ -0.21
CHD4-201ENST00000357008 PFN3P60673 137 aa13.73□□□□□ -0.21
CHD4-201ENST00000357008 SMAD2Q15796 467 aaKnown RBP13.73□□□□□ -0.21
CHD4-201ENST00000357008 ADGRE4PQ86SQ3 457 aa13.73□□□□□ -0.21
CHD4-201ENST00000357008 OR14A16Q8NHC5 309 aa13.73□□□□□ -0.21
CHD4-201ENST00000357008 ZNF296Q8WUU4 475 aaPredicted RBP13.73□□□□□ -0.21
CHD4-201ENST00000357008 DAZAP1Q96EP5 407 aaKnown RBP13.73□□□□□ -0.21
CHD4-201ENST00000357008 NIPSNAP3BQ9BS92 247 aa13.73□□□□□ -0.21
CHD4-201ENST00000357008 MYH13Q9UKX3 1938 aa13.73□□□□□ -0.21
CHD4-201ENST00000357008 SLCO2B1O94956 709 aa13.73□□□□□ -0.21
CHD4-201ENST00000357008 CD14P08571 375 aa13.73□□□□□ -0.21
CHD4-201ENST00000357008 TEKQ02763 1124 aa13.73□□□□□ -0.21
CHD4-201ENST00000357008 ERV3-1Q14264 604 aa13.73□□□□□ -0.21
CHD4-201ENST00000357008 SYT14P1Q58G82 188 aa13.73□□□□□ -0.21
CHD4-201ENST00000357008 UHRF2Q96PU4 802 aa13.73□□□□□ -0.21
CHD4-201ENST00000357008 GABARAPL1Q9H0R8 117 aa13.73□□□□□ -0.21
CHD4-201ENST00000357008 CA14Q9ULX7 337 aa13.73□□□□□ -0.21
CHD4-201ENST00000357008 ATP6V1G2-DDX39BF2Z307 99 aa13.73□□□□□ -0.21
CHD4-201ENST00000357008 M0QYG6 137 aa13.73□□□□□ -0.21
CHD4-201ENST00000357008 BET1O15155 118 aa13.73□□□□□ -0.21
CHD4-201ENST00000357008 NSA2O95478 260 aaKnown RBP13.73□□□□□ -0.21
CHD4-201ENST00000357008 LPLP06858 475 aa13.73□□□□□ -0.21
CHD4-201ENST00000357008 ECI1P42126 302 aa13.73□□□□□ -0.21
CHD4-201ENST00000357008 IAH1Q2TAA2 248 aaPredicted RBP13.73□□□□□ -0.21
CHD4-201ENST00000357008 CTU2Q2VPK5 515 aaKnown RBP13.73□□□□□ -0.21
CHD4-201ENST00000357008 AADACL3Q5VUY0 350 aa13.73□□□□□ -0.21
CHD4-201ENST00000357008 OR10K2Q6IF99 312 aa13.73□□□□□ -0.21
CHD4-201ENST00000357008 HEPHL1Q6MZM0 1159 aa13.73□□□□□ -0.21
CHD4-201ENST00000357008 TMEM207Q6UWW9 146 aa13.73□□□□□ -0.21
CHD4-201ENST00000357008 MISPQ8IVT2 679 aa13.73□□□□□ -0.21
CHD4-201ENST00000357008 YIPF5Q969M3 257 aa13.73□□□□□ -0.21
CHD4-201ENST00000357008 ANKRD9Q96BM1 317 aaPredicted RBP13.73□□□□□ -0.21
CHD4-201ENST00000357008 FYTTD1Q96QD9 318 aaKnown RBP13.73□□□□□ -0.21
CHD4-201ENST00000357008 C1QTNF3Q9BXJ4 246 aa13.73□□□□□ -0.21
CHD4-201ENST00000357008 CDCA4Q9BXL8 241 aa13.73□□□□□ -0.21
CHD4-201ENST00000357008 GPR55Q9Y2T6 319 aaPredicted RBP13.73□□□□□ -0.21
CHD4-201ENST00000357008 PCYT1BQ9Y5K3 369 aaPredicted RBP13.73□□□□□ -0.21
CHD4-201ENST00000357008 WIF1Q9Y5W5 379 aa13.73□□□□□ -0.21
CHD4-201ENST00000357008 MCRIP1C9JLW8 97 aa13.73□□□□□ -0.21
CHD4-201ENST00000357008 GIPP09681 153 aaPredicted RBP13.73□□□□□ -0.21
CHD4-201ENST00000357008 ZNF728P0DKX0 622 aa13.73□□□□□ -0.21
CHD4-201ENST00000357008 ZNF684Q5T5D7 378 aa13.73□□□□□ -0.21
CHD4-201ENST00000357008 OPN5Q6U736 354 aa13.73□□□□□ -0.21
CHD4-201ENST00000357008 GDPD3Q7L5L3 318 aa13.73□□□□□ -0.21
CHD4-201ENST00000357008 OR10R2Q8NGX6 335 aa13.73□□□□□ -0.21
CHD4-201ENST00000357008 DVL3Q92997 716 aaPredicted RBP13.73□□□□□ -0.21
CHD4-201ENST00000357008 ARHGAP9Q9BRR9 750 aa13.73□□□□□ -0.21
CHD4-201ENST00000357008 CPT2P23786 658 aa13.73□□□□□ -0.21
CHD4-201ENST00000357008 DUSP6Q16828 381 aa13.73□□□□□ -0.21
CHD4-201ENST00000357008 SLC48A1Q6P1K1 146 aa13.73□□□□□ -0.21
CHD4-201ENST00000357008 NPSR1Q6W5P4 371 aa13.73□□□□□ -0.21
CHD4-201ENST00000357008 OVCH1Q7RTY7 1134 aa13.73□□□□□ -0.21
CHD4-201ENST00000357008 TCTN2Q96GX1 697 aa13.73□□□□□ -0.21
CHD4-201ENST00000357008 PLEKHM1Q9Y4G2 1056 aa13.73□□□□□ -0.21
CHD4-201ENST00000357008 GABARAPH6UMI1 98 aa13.72□□□□□ -0.21
CHD4-201ENST00000357008 DPP4P27487 766 aa13.72□□□□□ -0.21
CHD4-201ENST00000357008 VRK3Q8IV63 474 aa13.72□□□□□ -0.21
CHD4-201ENST00000357008 CHST8Q9H2A9 424 aa13.72□□□□□ -0.21
CHD4-201ENST00000357008 DUSP21Q9H596 190 aa13.72□□□□□ -0.21
CHD4-201ENST00000357008 EMC9Q9Y3B6 208 aa13.72□□□□□ -0.21
CHD4-201ENST00000357008 MTHFD2P13995 350 aa13.72□□□□□ -0.21
CHD4-201ENST00000357008 SERPINF1P36955 418 aa13.72□□□□□ -0.21
CHD4-201ENST00000357008 TSFMP43897 325 aaKnown RBP13.72□□□□□ -0.21
CHD4-201ENST00000357008 CAMK2BQ13554 666 aa13.72□□□□□ -0.21
CHD4-201ENST00000357008 SLC36A2Q495M3 483 aa13.72□□□□□ -0.21
CHD4-201ENST00000357008 GLYATL3Q5SZD4 288 aa13.72□□□□□ -0.21
CHD4-201ENST00000357008 SLC39A9Q9NUM3 307 aa13.72□□□□□ -0.21
CHD4-201ENST00000357008 RNF186Q9NXI6 227 aa13.72□□□□□ -0.21
CHD4-201ENST00000357008 PTRH2Q9Y3E5 179 aaKnown RBP13.72□□□□□ -0.21
CHD4-201ENST00000357008 LAMTOR5O43504 91 aa13.72□□□□□ -0.21
CHD4-201ENST00000357008 SCAF4O95104 1147 aaKnown RBP13.72□□□□□ -0.21
CHD4-201ENST00000357008 THBS3P49746 956 aa13.72□□□□□ -0.21
CHD4-201ENST00000357008 RFLNAQ6ZTI6 216 aa13.72□□□□□ -0.21
CHD4-201ENST00000357008 ZNF610Q8N9Z0 462 aa13.72□□□□□ -0.21
CHD4-201ENST00000357008 NKX3-1Q99801 234 aaPredicted RBP13.72□□□□□ -0.21
CHD4-201ENST00000357008 GLCEO94923 617 aa13.72□□□□□ -0.21
CHD4-201ENST00000357008 SIX6O95475 246 aa13.72□□□□□ -0.21
CHD4-201ENST00000357008 BCKDHBP21953 392 aa13.72□□□□□ -0.21
CHD4-201ENST00000357008 ZP2Q05996 745 aa13.72□□□□□ -0.21
CHD4-201ENST00000357008 MEP1BQ16820 701 aa13.72□□□□□ -0.21
CHD4-201ENST00000357008 ATPAF1Q5TC12 328 aaPredicted RBP13.72□□□□□ -0.21
CHD4-201ENST00000357008 OR52W1Q6IF63 320 aa13.72□□□□□ -0.21
CHD4-201ENST00000357008 ADGRF3Q8IZF5 1079 aa13.72□□□□□ -0.21
CHD4-201ENST00000357008 FAM26EQ8N5C1 309 aa13.72□□□□□ -0.21
CHD4-201ENST00000357008 SLC6A18Q96N87 628 aa13.72□□□□□ -0.21
CHD4-201ENST00000357008 DDOQ99489 341 aa13.72□□□□□ -0.21
CHD4-201ENST00000357008 CDCA3Q99618 268 aaPredicted RBP13.72□□□□□ -0.21
CHD4-201ENST00000357008 SGPP1Q9BX95 441 aa13.72□□□□□ -0.21
CHD4-201ENST00000357008 PURGQ9UJV8 347 aaKnown RBP13.72□□□□□ -0.21
CHD4-201ENST00000357008 FAM155AB1AL88 458 aaPredicted RBP13.72□□□□□ -0.21
CHD4-201ENST00000357008 ADAM10O14672 748 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms