RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 C8BP07358 591 aa14.54□□□□□ -0.08
PDLIM7-201ENST00000355572 IL1RL1Q01638 556 aa14.54□□□□□ -0.08
PDLIM7-201ENST00000355572 NAAAQ02083 359 aa14.54□□□□□ -0.08
PDLIM7-201ENST00000355572 HGFACQ04756 655 aa14.54□□□□□ -0.08
PDLIM7-201ENST00000355572 CAMK2DQ13557 499 aa14.54□□□□□ -0.08
PDLIM7-201ENST00000355572 C1DQ13901 141 aaKnown RBP14.54□□□□□ -0.08
PDLIM7-201ENST00000355572 MSMPQ1L6U9 139 aa14.54□□□□□ -0.08
PDLIM7-201ENST00000355572 ANKRD16Q6P6B7 361 aa14.54□□□□□ -0.08
PDLIM7-201ENST00000355572 ZNF613Q6PF04 617 aa14.54□□□□□ -0.08
PDLIM7-201ENST00000355572 C5orf46Q6UWT4 87 aa14.54□□□□□ -0.08
PDLIM7-201ENST00000355572 SLC46A3Q7Z3Q1 461 aa14.54□□□□□ -0.08
PDLIM7-201ENST00000355572 C20orf196Q8IYI0 205 aa14.54□□□□□ -0.08
PDLIM7-201ENST00000355572 MAGEE2Q8TD90 523 aaPredicted RBP14.54□□□□□ -0.08
PDLIM7-201ENST00000355572 NANOS1Q8WY41 292 aaKnown RBP14.54□□□□□ -0.08
PDLIM7-201ENST00000355572 ZNF426Q9BUY5 554 aa14.54□□□□□ -0.08
PDLIM7-201ENST00000355572 MEPEQ9NQ76 525 aaPredicted RBP14.54□□□□□ -0.08
PDLIM7-201ENST00000355572 TAS2R5Q9NYW4 299 aa14.54□□□□□ -0.08
PDLIM7-201ENST00000355572 ADAM21Q9UKJ8 722 aa14.54□□□□□ -0.08
PDLIM7-201ENST00000355572 CH25HO95992 272 aa14.53□□□□□ -0.08
PDLIM7-201ENST00000355572 WNT11O96014 354 aa14.53□□□□□ -0.08
PDLIM7-201ENST00000355572 NQO1P15559 274 aaKnown RBP14.53□□□□□ -0.08
PDLIM7-201ENST00000355572 LSM11P83369 360 aaKnown RBP eCLIP14.53□□□□□ -0.08
PDLIM7-201ENST00000355572 PMS2P3Q13401 168 aa14.53□□□□□ -0.08
PDLIM7-201ENST00000355572 ZNF74Q16587 644 aa14.53□□□□□ -0.08
PDLIM7-201ENST00000355572 SWI5Q1ZZU3 235 aa14.53□□□□□ -0.08
PDLIM7-201ENST00000355572 HMBOX1Q6NT76 420 aa14.53□□□□□ -0.08
PDLIM7-201ENST00000355572 ABHD12BQ7Z5M8 362 aaPredicted RBP14.53□□□□□ -0.08
PDLIM7-201ENST00000355572 PATL1Q86TB9 770 aaKnown RBP14.53□□□□□ -0.08
PDLIM7-201ENST00000355572 NKAIN4Q8IVV8 208 aa14.53□□□□□ -0.08
PDLIM7-201ENST00000355572 UEVLDQ8IX04 471 aa14.53□□□□□ -0.08
PDLIM7-201ENST00000355572 FBXL14Q8N1E6 418 aa14.53□□□□□ -0.08
PDLIM7-201ENST00000355572 ZNF525Q8N782 197 aa14.53□□□□□ -0.08
PDLIM7-201ENST00000355572 BHLHE22Q8NFJ8 381 aaPredicted RBP14.53□□□□□ -0.08
PDLIM7-201ENST00000355572 FGFBP3Q8TAT2 258 aa14.53□□□□□ -0.08
PDLIM7-201ENST00000355572 ZNF75AQ96N20 296 aa14.53□□□□□ -0.08
PDLIM7-201ENST00000355572 PCDHAC1Q9H158 963 aa14.53□□□□□ -0.08
PDLIM7-201ENST00000355572 SLC13A4Q9UKG4 626 aa14.53□□□□□ -0.08
PDLIM7-201ENST00000355572 IGKV3-15P01624 115 aa14.52□□□□□ -0.09
PDLIM7-201ENST00000355572 VIMP08670 466 aaKnown RBP14.52□□□□□ -0.09
PDLIM7-201ENST00000355572 IGFBP1P08833 259 aaPredicted RBP14.52□□□□□ -0.09
PDLIM7-201ENST00000355572 TROVE2P10155 538 aaKnown RBP eCLIP14.52□□□□□ -0.09
PDLIM7-201ENST00000355572 OR1E2P47887 323 aa14.52□□□□□ -0.09
PDLIM7-201ENST00000355572 IDH3GP51553 393 aaPredicted RBP14.52□□□□□ -0.09
PDLIM7-201ENST00000355572 UGT2B15P54855 530 aa14.52□□□□□ -0.09
PDLIM7-201ENST00000355572 PUDPQ08623 228 aa14.52□□□□□ -0.09
PDLIM7-201ENST00000355572 MELKQ14680 651 aa14.52□□□□□ -0.09
PDLIM7-201ENST00000355572 ZNF544Q6NX49 715 aa14.52□□□□□ -0.09
PDLIM7-201ENST00000355572 KLHL24Q6TFL4 600 aa14.52□□□□□ -0.09
PDLIM7-201ENST00000355572 MDP1Q86V88 176 aa14.52□□□□□ -0.09
PDLIM7-201ENST00000355572 CARM1Q86X55 608 aa14.52□□□□□ -0.09
PDLIM7-201ENST00000355572 GPR137CQ8N3F9 429 aa14.52□□□□□ -0.09
PDLIM7-201ENST00000355572 C10orf53Q8N6V4 93 aa14.52□□□□□ -0.09
PDLIM7-201ENST00000355572 SCAIQ8N9R8 606 aa14.52□□□□□ -0.09
PDLIM7-201ENST00000355572 OR10H5Q8NGA6 315 aa14.52□□□□□ -0.09
PDLIM7-201ENST00000355572 OR5J2Q8NH18 312 aa14.52□□□□□ -0.09
PDLIM7-201ENST00000355572 PFN4Q8NHR9 129 aa14.52□□□□□ -0.09
PDLIM7-201ENST00000355572 FBXO17Q96EF6 278 aa14.52□□□□□ -0.09
PDLIM7-201ENST00000355572 MS4A3Q96HJ5 214 aa14.52□□□□□ -0.09
PDLIM7-201ENST00000355572 HS6ST2Q96MM7 605 aa14.52□□□□□ -0.09
PDLIM7-201ENST00000355572 SORCS2Q96PQ0 1159 aa14.52□□□□□ -0.09
PDLIM7-201ENST00000355572 ZNF317Q96PQ6 595 aaPredicted RBP14.52□□□□□ -0.09
PDLIM7-201ENST00000355572 ASPNQ9BXN1 380 aa14.52□□□□□ -0.09
PDLIM7-201ENST00000355572 CCDC134Q9H6E4 229 aa14.52□□□□□ -0.09
PDLIM7-201ENST00000355572 OBP2BQ9NPH6 170 aa14.52□□□□□ -0.09
PDLIM7-201ENST00000355572 FAIMQ9NVQ4 179 aa14.52□□□□□ -0.09
PDLIM7-201ENST00000355572 CMTM6Q9NX76 183 aa14.52□□□□□ -0.09
PDLIM7-201ENST00000355572 B3GNT2Q9NY97 397 aa14.52□□□□□ -0.09
PDLIM7-201ENST00000355572 TRAPPC13A5PLN9 417 aa14.51□□□□□ -0.09
PDLIM7-201ENST00000355572 KIAA1324LA8MWY0 1029 aaPredicted RBP14.51□□□□□ -0.09
PDLIM7-201ENST00000355572 PIP5K1CO60331 668 aa14.51□□□□□ -0.09
PDLIM7-201ENST00000355572 HLA-HP01893 362 aa14.51□□□□□ -0.09
PDLIM7-201ENST00000355572 APOBEC3AP31941 199 aaPredicted RBP14.51□□□□□ -0.09
PDLIM7-201ENST00000355572 BIDP55957 195 aa14.51□□□□□ -0.09
PDLIM7-201ENST00000355572 UBE2NP61088 152 aaKnown RBP14.51□□□□□ -0.09
PDLIM7-201ENST00000355572 CYLC2Q14093 348 aaPredicted RBP14.51□□□□□ -0.09
PDLIM7-201ENST00000355572 SWT1Q5T5J6 900 aaKnown RBP14.51□□□□□ -0.09
PDLIM7-201ENST00000355572 VHLLQ6RSH7 139 aa14.51□□□□□ -0.09
PDLIM7-201ENST00000355572 TREML1Q86YW5 311 aa14.51□□□□□ -0.09
PDLIM7-201ENST00000355572 PIK3C3Q8NEB9 887 aa14.51□□□□□ -0.09
PDLIM7-201ENST00000355572 OR8J3Q8NGG0 315 aa14.51□□□□□ -0.09
PDLIM7-201ENST00000355572 RCN3Q96D15 328 aa14.51□□□□□ -0.09
PDLIM7-201ENST00000355572 EPYCQ99645 322 aa14.51□□□□□ -0.09
PDLIM7-201ENST00000355572 FKRPQ9H9S5 495 aa14.51□□□□□ -0.09
PDLIM7-201ENST00000355572 C20orf141Q9NUB4 165 aa14.51□□□□□ -0.09
PDLIM7-201ENST00000355572 FAM53CQ9NYF3 392 aa14.51□□□□□ -0.09
PDLIM7-201ENST00000355572 SELENONQ9NZV5 590 aa14.51□□□□□ -0.09
PDLIM7-201ENST00000355572 SH3GLB1Q9Y371 365 aa14.51□□□□□ -0.09
PDLIM7-201ENST00000355572 CORINQ9Y5Q5 1042 aa14.51□□□□□ -0.09
PDLIM7-201ENST00000355572 SONP18583 2426 aaKnown RBP14.51□□□□□ -0.09
PDLIM7-201ENST00000355572 CUBNO60494 3623 aa14.5□□□□□ -0.09
PDLIM7-201ENST00000355572 IGHV2OR16-5A0A0B4J2B6 119 aa14.5□□□□□ -0.09
PDLIM7-201ENST00000355572 OR6C65A6NJZ3 312 aa14.5□□□□□ -0.09
PDLIM7-201ENST00000355572 ZNF99A8MXY4 864 aaPredicted RBP14.5□□□□□ -0.09
PDLIM7-201ENST00000355572 H7C417 338 aa14.5□□□□□ -0.09
PDLIM7-201ENST00000355572 ASAH2BP0C7U1 165 aa14.5□□□□□ -0.09
PDLIM7-201ENST00000355572 PATE4P0C8F1 98 aa14.5□□□□□ -0.09
PDLIM7-201ENST00000355572 ADORA3P0DMS8 318 aa14.5□□□□□ -0.09
PDLIM7-201ENST00000355572 IFNGR1P15260 489 aa14.5□□□□□ -0.09
PDLIM7-201ENST00000355572 CBR1P16152 277 aa14.5□□□□□ -0.09
PDLIM7-201ENST00000355572 FUT1P19526 365 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms