RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 OR2T7P0C7T2 308 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 OR8G3PP0DMU2 310 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 DDX6P26196 483 aaKnown RBP eCLIP6.99□□□□□ -1.29
BRCA1-201ENST00000352993 CASRP41180 1078 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 RBM34P42696 430 aaKnown RBP6.99□□□□□ -1.29
BRCA1-201ENST00000352993 PNLIPRP2P54317 469 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 FXYD6P3P58550 94 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 POU4F2Q12837 409 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 CLINT1Q14677 625 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 TGIF1Q15583 401 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 MPPED2Q15777 294 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 CSRP2Q16527 193 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 GFOD2Q3B7J2 385 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 KLHL26Q53HC5 615 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 STAC2Q6ZMT1 411 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 ZNF836Q6ZNA1 936 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 GAREM2Q75VX8 874 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 CD163Q86VB7 1156 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 PCSK9Q8NBP7 692 aaKnown RBP6.99□□□□□ -1.29
BRCA1-201ENST00000352993 OR2T27Q8NH04 317 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 VOPP1Q96AW1 172 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 C20orf24Q9BUV8 137 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 ADAP2Q9NPF8 381 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 SLC27A6Q9Y2P4 619 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 YIPF1Q9Y548 306 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 IER3IP1Q9Y5U9 82 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 A0A087WV48 116 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 RAD1O60671 282 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 ZFPL1O95159 310 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 TPT1P13693 172 aaKnown RBP6.99□□□□□ -1.29
BRCA1-201ENST00000352993 PGAM2P15259 253 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 ABOP16442 354 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 CERS1P27544 350 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 PRKAR1BP31321 381 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 SLC6A6P31641 620 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 LBX1P52954 281 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 RPS11P62280 158 aaKnown RBP eCLIP6.99□□□□□ -1.29
BRCA1-201ENST00000352993 ADAM8P78325 824 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 HTRA4P83105 476 aaPredicted RBP6.99□□□□□ -1.29
BRCA1-201ENST00000352993 ELAVL2Q12926 359 aaKnown RBP6.99□□□□□ -1.29
BRCA1-201ENST00000352993 RNF212Q495C1 297 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 GXYLT1Q4G148 440 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 ARHGAP40Q5TG30 622 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 ZNF425Q6IV72 752 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 WDR88Q6ZMY6 472 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 SLC29A4Q7RTT9 530 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 FAM129CQ86XR2 697 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 SKA3Q8IX90 412 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 OR4N5Q8IXE1 308 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 DND1Q8IYX4 353 aaKnown RBP6.99□□□□□ -1.29
BRCA1-201ENST00000352993 RNF141Q8WVD5 230 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 RELTQ969Z4 430 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 ISOC2Q96AB3 205 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 MOAP1Q96BY2 351 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 SLC35A4Q96G79 324 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 CMTM3Q96MX0 182 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 CLCC1Q96S66 551 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 GFI1Q99684 422 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 SELENOIQ9C0D9 397 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 TNFSF18Q9UNG2 199 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 ELOA3DA6NLF2 546 aaPredicted RBP6.99□□□□□ -1.29
BRCA1-201ENST00000352993 GRM6O15303 877 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 EIF4E2O60573 245 aaKnown RBP6.99□□□□□ -1.29
BRCA1-201ENST00000352993 TBX6O95947 436 aaPredicted RBP6.99□□□□□ -1.29
BRCA1-201ENST00000352993 APEHP13798 732 aaKnown RBP6.99□□□□□ -1.29
BRCA1-201ENST00000352993 ZNF28P17035 718 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 GABRR2P28476 465 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 HOXC8P31273 242 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 ILF3Q12906 894 aaKnown RBP eCLIP6.99□□□□□ -1.29
BRCA1-201ENST00000352993 ELAVL1Q15717 326 aaKnown RBP6.99□□□□□ -1.29
BRCA1-201ENST00000352993 ELOA3BQ3SY89 546 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 TMEM205Q6UW68 189 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 LCTLQ6UWM7 567 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 RNF44Q7L0R7 432 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 SAMD14Q8IZD0 417 aaPredicted RBP6.99□□□□□ -1.29
BRCA1-201ENST00000352993 ELOA3Q8NG57 546 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 C2orf15Q8WU43 125 aaKnown RBP6.99□□□□□ -1.29
BRCA1-201ENST00000352993 TSEN15Q8WW01 171 aaKnown RBP6.99□□□□□ -1.29
BRCA1-201ENST00000352993 S100PBPQ96BU1 408 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 ADAD1Q96M93 576 aaKnown RBP6.99□□□□□ -1.29
BRCA1-201ENST00000352993 ACTRT3Q9BYD9 372 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 ULBP3Q9BZM4 244 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 FAM117AQ9C073 453 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 CHRDQ9H2X0 955 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 C6orf106Q9H6K1 298 aaPredicted RBP6.99□□□□□ -1.29
BRCA1-201ENST00000352993 MTHFD2LQ9H903 347 aaPredicted RBP6.99□□□□□ -1.29
BRCA1-201ENST00000352993 TMEM27Q9HBJ8 222 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 MARCH5Q9NX47 278 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 EPHA6Q9UF33 1036 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 KIF26AQ9ULI4 1882 aaPredicted RBP6.99□□□□□ -1.29
BRCA1-201ENST00000352993 CENPVL1A0A0U1RR11 272 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 A0A1B0GTH9 108 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 A0A1W2PR48 441 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 K7ESM1 405 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 KLF4O43474 513 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 GPRIN2O60269 458 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 DUSP11O75319 330 aaKnown RBP6.98□□□□□ -1.29
BRCA1-201ENST00000352993 ATXN8OSP0DMR3 200 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 CALCBP10092 127 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 HIST1H1CP16403 213 aaKnown RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms