RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 C6orf62Q9GZU0 229 aaPredicted RBP6.25□□□□□ -1.41
TRIM55-203ENST00000350034 GALNT9Q9HCQ5 603 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 SH2D2AQ9NP31 389 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 FANCFQ9NPI8 374 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 SDHAF3Q9NRP4 125 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 INIPQ9NRY2 104 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 SNTG1Q9NSN8 517 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 FAIMQ9NVQ4 179 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 TBCCD1Q9NVR7 557 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 TOR4AQ9NXH8 423 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 VSX1Q9NZR4 365 aaPredicted RBP6.25□□□□□ -1.41
TRIM55-203ENST00000350034 MED11Q9P086 117 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 AKAP7Q9P0M2 348 aaPredicted RBP6.25□□□□□ -1.41
TRIM55-203ENST00000350034 GRHPRQ9UBQ7 328 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 ZNF346Q9UL40 294 aaKnown RBP6.25□□□□□ -1.41
TRIM55-203ENST00000350034 COPS3Q9UNS2 423 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 TRAPPC4Q9Y296 219 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 LOXL2Q9Y4K0 774 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 WIF1Q9Y5W5 379 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 CHCHD2Q9Y6H1 151 aaPredicted RBP6.25□□□□□ -1.41
TRIM55-203ENST00000350034 TEX51A0A1B0GUA7 166 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 PNMA8CA0A1B0GUJ8 204 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 C2orf72A6NCS6 295 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 PRR32B1ATL7 298 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 LOC110117498-PIK3R3F6TDL0 507 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 J3QLW9 94 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 DCTN6O00399 190 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 GMFGO60234 142 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 SELENOFO60613 162 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 STK17BO94768 372 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 ABHD16AO95870 558 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 RENP00797 406 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 CELA2AP08217 269 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 ZNF806P0C7X5 589 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 ZNF19P17023 458 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 TGM1P22735 817 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 F8A1P23610 371 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 GRPRP30550 384 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 PYCR1P32322 319 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 NAA10P41227 235 aaPredicted RBP6.24□□□□□ -1.41
TRIM55-203ENST00000350034 FOLR3P41439 243 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 TGM4P49221 684 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 MTNR1BP49286 362 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 HCCSP53701 268 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 MLF1P58340 268 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 RPL27P61353 136 aaKnown RBP6.24□□□□□ -1.41
TRIM55-203ENST00000350034 INSM1Q01101 510 aaPredicted RBP6.24□□□□□ -1.41
TRIM55-203ENST00000350034 FOXF1Q12946 379 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 SNTA1Q13424 505 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 INSL4Q14641 139 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 CDK5R1Q15078 307 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 ZNF239Q16600 458 aaKnown RBP6.24□□□□□ -1.41
TRIM55-203ENST00000350034 ZNF181Q2M3W8 571 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 RGS21Q2M5E4 152 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 BTBD16Q32M84 506 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 PLPPR5Q32ZL2 321 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 CCDC58Q4VC31 144 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 DCAF12Q5T6F0 453 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 BICRALQ6AI39 1079 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 OR5M10Q6IEU7 315 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 ARL9Q6T311 187 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 OPN5Q6U736 354 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 ARSKQ6UWY0 536 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 UNQ9370/PRO34162Q6UXP9 181 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 NDUFAF7Q7L592 441 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 TIPARPQ7Z3E1 657 aaKnown RBP6.24□□□□□ -1.41
TRIM55-203ENST00000350034 PPP1R32Q7Z5V6 425 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 CDC20BQ86Y33 519 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 LYSMD2Q8IV50 215 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 DND1Q8IYX4 353 aaKnown RBP6.24□□□□□ -1.41
TRIM55-203ENST00000350034 OR6V1Q8N148 313 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 MS4A15Q8N5U1 240 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 SCAIQ8N9R8 606 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 ZNF511Q8NB15 262 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 MINDY2Q8NBR6 621 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 OR11G2Q8NGC1 345 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 OR51L1Q8NGJ5 315 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 OR2T4Q8NH00 348 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 ABHD4Q8TB40 342 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 SMAP2Q8WU79 429 aaPredicted RBP6.24□□□□□ -1.41
TRIM55-203ENST00000350034 ASB15Q8WXK1 588 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 THAP4Q8WY91 577 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 MRPL48Q96GC5 212 aaKnown RBP6.24□□□□□ -1.41
TRIM55-203ENST00000350034 LIN37Q96GY3 246 aaPredicted RBP6.24□□□□□ -1.41
TRIM55-203ENST00000350034 COX4I2Q96KJ9 171 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 TSSK2Q96PF2 358 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 TAAR9Q96RI9 348 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 MNTQ99583 582 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 KCNS3Q9BQ31 491 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 SLC30A2Q9BRI3 323 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 TMED9Q9BVK6 235 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 HDHD5Q9BXW7 423 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 MFRPQ9BY79 579 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 OR11A1Q9GZK7 315 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 RNF32Q9H0A6 362 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 MIXL1Q9H2W2 232 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 TXNIPQ9H3M7 391 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 RPRD1BQ9NQG5 326 aaKnown RBP6.24□□□□□ -1.41
TRIM55-203ENST00000350034 GALNT8Q9NY28 637 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 PPP4R1LQ9P1A2 415 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms