RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 AMDHD1Q96NU7 426 aa13.9□□□□□ -0.18
PTBP1-201ENST00000349038 OR7D2Q96RA2 312 aa13.9□□□□□ -0.18
PTBP1-201ENST00000349038 GPN3Q9UHW5 284 aaPredicted RBP13.9□□□□□ -0.18
PTBP1-201ENST00000349038 EXOGQ9Y2C4 368 aaKnown RBP13.9□□□□□ -0.18
PTBP1-201ENST00000349038 TRAV14DV4A0A0A6YYC5 116 aa13.89□□□□□ -0.19
PTBP1-201ENST00000349038 TSPAN11A1L157 253 aa13.89□□□□□ -0.19
PTBP1-201ENST00000349038 FITM1A5D6W6 292 aa13.89□□□□□ -0.19
PTBP1-201ENST00000349038 SLC22A31A6NKX4 558 aa13.89□□□□□ -0.19
PTBP1-201ENST00000349038 PCDH8O95206 1070 aa13.89□□□□□ -0.19
PTBP1-201ENST00000349038 NT5EP21589 574 aa13.89□□□□□ -0.19
PTBP1-201ENST00000349038 GABRR2P28476 465 aa13.89□□□□□ -0.19
PTBP1-201ENST00000349038 LTBQ06643 244 aa13.89□□□□□ -0.19
PTBP1-201ENST00000349038 FAM76BQ5HYJ3 339 aa13.89□□□□□ -0.19
PTBP1-201ENST00000349038 C3orf33Q6P1S2 294 aa13.89□□□□□ -0.19
PTBP1-201ENST00000349038 FAM83HQ6ZRV2 1179 aaPredicted RBP13.89□□□□□ -0.19
PTBP1-201ENST00000349038 FAM129CQ86XR2 697 aa13.89□□□□□ -0.19
PTBP1-201ENST00000349038 ARMC10Q8N2F6 343 aa13.89□□□□□ -0.19
PTBP1-201ENST00000349038 NUP43Q8NFH3 380 aa13.89□□□□□ -0.19
PTBP1-201ENST00000349038 DIO2Q92813 273 aa13.89□□□□□ -0.19
PTBP1-201ENST00000349038 HS6ST2Q96MM7 605 aa13.89□□□□□ -0.19
PTBP1-201ENST00000349038 SLC6A7Q99884 636 aa13.89□□□□□ -0.19
PTBP1-201ENST00000349038 WDR45Q9Y484 360 aa13.89□□□□□ -0.19
PTBP1-201ENST00000349038 PLXNA2O75051 1894 aa13.89□□□□□ -0.19
PTBP1-201ENST00000349038 ANKRD20A5PA0PJZ0 165 aa13.89□□□□□ -0.19
PTBP1-201ENST00000349038 LRRC72A6NJI9 287 aa13.89□□□□□ -0.19
PTBP1-201ENST00000349038 OR6C65A6NJZ3 312 aa13.89□□□□□ -0.19
PTBP1-201ENST00000349038 H7C1Q1 480 aa13.89□□□□□ -0.19
PTBP1-201ENST00000349038 PIN1P1O15428 100 aa13.89□□□□□ -0.19
PTBP1-201ENST00000349038 ELFN1P0C7U0 828 aa13.89□□□□□ -0.19
PTBP1-201ENST00000349038 ZNF658BQ4V348 819 aaPredicted RBP13.89□□□□□ -0.19
PTBP1-201ENST00000349038 TPGS2Q68CL5 300 aa13.89□□□□□ -0.19
PTBP1-201ENST00000349038 MRGPREQ86SM8 312 aa13.89□□□□□ -0.19
PTBP1-201ENST00000349038 CRIPAKQ8N1N5 446 aa13.89□□□□□ -0.19
PTBP1-201ENST00000349038 FAM24BQ8N5W8 94 aa13.89□□□□□ -0.19
PTBP1-201ENST00000349038 ARL5BQ96KC2 179 aa13.89□□□□□ -0.19
PTBP1-201ENST00000349038 MYADMQ96S97 322 aa13.89□□□□□ -0.19
PTBP1-201ENST00000349038 ZNF275Q9NSD4 429 aaPredicted RBP13.89□□□□□ -0.19
PTBP1-201ENST00000349038 GSKIPQ9P0R6 139 aa13.89□□□□□ -0.19
PTBP1-201ENST00000349038 FOXJ3Q9UPW0 622 aa13.89□□□□□ -0.19
PTBP1-201ENST00000349038 DENND4AQ7Z401 1863 aa13.89□□□□□ -0.19
PTBP1-201ENST00000349038 CASP8AP2Q9UKL3 1982 aa13.89□□□□□ -0.19
PTBP1-201ENST00000349038 TVP23AA6NH52 213 aa13.89□□□□□ -0.19
PTBP1-201ENST00000349038 NEDD8-MDP1E9PL57 170 aa13.89□□□□□ -0.19
PTBP1-201ENST00000349038 LEFTY1O75610 366 aa13.89□□□□□ -0.19
PTBP1-201ENST00000349038 OR4E1P0C645 316 aa13.89□□□□□ -0.19
PTBP1-201ENST00000349038 ZNF3P17036 446 aa13.89□□□□□ -0.19
PTBP1-201ENST00000349038 ABCD3P28288 659 aa13.89□□□□□ -0.19
PTBP1-201ENST00000349038 NR0B1P51843 470 aaKnown RBP13.89□□□□□ -0.19
PTBP1-201ENST00000349038 CASP6P55212 293 aa13.89□□□□□ -0.19
PTBP1-201ENST00000349038 SNRPNP63162 240 aaKnown RBP13.89□□□□□ -0.19
PTBP1-201ENST00000349038 HABP2Q14520 560 aaPredicted RBP13.89□□□□□ -0.19
PTBP1-201ENST00000349038 CSRP2Q16527 193 aa13.89□□□□□ -0.19
PTBP1-201ENST00000349038 HACD4Q5VWC8 232 aa13.89□□□□□ -0.19
PTBP1-201ENST00000349038 WDR88Q6ZMY6 472 aa13.89□□□□□ -0.19
PTBP1-201ENST00000349038 HTR3DQ70Z44 454 aa13.89□□□□□ -0.19
PTBP1-201ENST00000349038 OR10AC1Q8NH08 325 aa13.89□□□□□ -0.19
PTBP1-201ENST00000349038 NMNAT3Q96T66 252 aa13.89□□□□□ -0.19
PTBP1-201ENST00000349038 SMIM3Q9BZL3 60 aa13.89□□□□□ -0.19
PTBP1-201ENST00000349038 ADGRL4Q9HBW9 690 aa13.89□□□□□ -0.19
PTBP1-201ENST00000349038 TM7SF3Q9NS93 570 aa13.89□□□□□ -0.19
PTBP1-201ENST00000349038 LSM7Q9UK45 103 aaKnown RBP13.89□□□□□ -0.19
PTBP1-201ENST00000349038 TMEM82A0PJX8 343 aa13.88□□□□□ -0.19
PTBP1-201ENST00000349038 CXorf65A6NEN9 183 aa13.88□□□□□ -0.19
PTBP1-201ENST00000349038 HMSDA8MTL9 139 aa13.88□□□□□ -0.19
PTBP1-201ENST00000349038 CPN1P15169 458 aa13.88□□□□□ -0.19
PTBP1-201ENST00000349038 RAB6AP20340 208 aa13.88□□□□□ -0.19
PTBP1-201ENST00000349038 PNLIPRP2P54317 469 aa13.88□□□□□ -0.19
PTBP1-201ENST00000349038 ARHGAP40Q5TG30 622 aa13.88□□□□□ -0.19
PTBP1-201ENST00000349038 GDPD4Q6W3E5 623 aa13.88□□□□□ -0.19
PTBP1-201ENST00000349038 ST7LQ8TDW4 575 aa13.88□□□□□ -0.19
PTBP1-201ENST00000349038 ARL11Q969Q4 196 aa13.88□□□□□ -0.19
PTBP1-201ENST00000349038 BPIFA2Q96DR5 249 aa13.88□□□□□ -0.19
PTBP1-201ENST00000349038 C1QTNF2Q9BXJ5 285 aa13.88□□□□□ -0.19
PTBP1-201ENST00000349038 IL21Q9HBE4 155 aa13.88□□□□□ -0.19
PTBP1-201ENST00000349038 SRA1Q9HD15 236 aaKnown RBP13.88□□□□□ -0.19
PTBP1-201ENST00000349038 SZT2Q5T011 3432 aa13.88□□□□□ -0.19
PTBP1-201ENST00000349038 ELOA3DA6NLF2 546 aaPredicted RBP13.88□□□□□ -0.19
PTBP1-201ENST00000349038 SELLP14151 372 aa13.88□□□□□ -0.19
PTBP1-201ENST00000349038 S100PP25815 95 aa13.88□□□□□ -0.19
PTBP1-201ENST00000349038 VASPP50552 380 aaPredicted RBP13.88□□□□□ -0.19
PTBP1-201ENST00000349038 TAS2R38P59533 333 aa13.88□□□□□ -0.19
PTBP1-201ENST00000349038 POLR2LP62875 67 aaKnown RBP13.88□□□□□ -0.19
PTBP1-201ENST00000349038 KRT33BQ14525 404 aa13.88□□□□□ -0.19
PTBP1-201ENST00000349038 ELOA3BQ3SY89 546 aa13.88□□□□□ -0.19
PTBP1-201ENST00000349038 PWWP2BQ6NUJ5 590 aa13.88□□□□□ -0.19
PTBP1-201ENST00000349038 TMEM205Q6UW68 189 aa13.88□□□□□ -0.19
PTBP1-201ENST00000349038 SAMD14Q8IZD0 417 aaPredicted RBP13.88□□□□□ -0.19
PTBP1-201ENST00000349038 ELOA3Q8NG57 546 aa13.88□□□□□ -0.19
PTBP1-201ENST00000349038 CD300LFQ8TDQ1 290 aa13.88□□□□□ -0.19
PTBP1-201ENST00000349038 ROBO4Q8WZ75 1007 aa13.88□□□□□ -0.19
PTBP1-201ENST00000349038 INTS12Q96CB8 462 aaKnown RBP13.88□□□□□ -0.19
PTBP1-201ENST00000349038 Q96M85 177 aa13.88□□□□□ -0.19
PTBP1-201ENST00000349038 JSRP1Q96MG2 331 aaPredicted RBP13.88□□□□□ -0.19
PTBP1-201ENST00000349038 CAMK1GQ96NX5 476 aa13.88□□□□□ -0.19
PTBP1-201ENST00000349038 GAREM1Q9H706 876 aa13.88□□□□□ -0.19
PTBP1-201ENST00000349038 IER3IP1Q9Y5U9 82 aa13.88□□□□□ -0.19
PTBP1-201ENST00000349038 RNF215Q9Y6U7 377 aa13.88□□□□□ -0.19
PTBP1-201ENST00000349038 ZNF860A6NHJ4 632 aa13.87□□□□□ -0.19
PTBP1-201ENST00000349038 RFPL4AA6NLU0 287 aa13.87□□□□□ -0.19
PTBP1-201ENST00000349038 WASH3PC4AMC7 463 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms