RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 HPP00738 406 aa16.3■□□□□ 0.2
APP-202ENST00000348990 TACSTD2P09758 323 aa16.3■□□□□ 0.2
APP-202ENST00000348990 PRSS3P35030 304 aa16.3■□□□□ 0.2
APP-202ENST00000348990 FLI1Q01543 452 aaPredicted RBP16.3■□□□□ 0.2
APP-202ENST00000348990 GAS6Q14393 721 aa16.3■□□□□ 0.2
APP-202ENST00000348990 Q499Y3 187 aa16.3■□□□□ 0.2
APP-202ENST00000348990 C12orf45Q8N5I9 185 aaPredicted RBP16.3■□□□□ 0.2
APP-202ENST00000348990 NSMAFQ92636 917 aa16.3■□□□□ 0.2
APP-202ENST00000348990 SMARCD2Q92925 531 aa16.3■□□□□ 0.2
APP-202ENST00000348990 ALG12Q9BV10 488 aa16.3■□□□□ 0.2
APP-202ENST00000348990 FBXO4Q9UKT5 387 aa16.3■□□□□ 0.2
APP-202ENST00000348990 SLC6A5Q9Y345 797 aa16.3■□□□□ 0.2
APP-202ENST00000348990 DOCK9Q9BZ29 2069 aa16.3■□□□□ 0.2
APP-202ENST00000348990 DENND4CQ5VZ89 1909 aa16.3■□□□□ 0.2
APP-202ENST00000348990 ZNF98A6NK75 572 aa16.3■□□□□ 0.2
APP-202ENST00000348990 AKAIN1P0CW23 69 aa16.3■□□□□ 0.2
APP-202ENST00000348990 PVALBP20472 110 aaPredicted RBP16.3■□□□□ 0.2
APP-202ENST00000348990 EMDP50402 254 aa16.3■□□□□ 0.2
APP-202ENST00000348990 SGCGQ13326 291 aa16.3■□□□□ 0.2
APP-202ENST00000348990 RUNX2Q13950 521 aa16.3■□□□□ 0.2
APP-202ENST00000348990 GATSQ8NAP1 163 aa16.3■□□□□ 0.2
APP-202ENST00000348990 TMIEQ8NEW7 156 aa16.3■□□□□ 0.2
APP-202ENST00000348990 OR6N2Q8NGY6 317 aa16.3■□□□□ 0.2
APP-202ENST00000348990 C15orf40Q8WUR7 153 aa16.3■□□□□ 0.2
APP-202ENST00000348990 NKD1Q969G9 470 aa16.3■□□□□ 0.2
APP-202ENST00000348990 OR2AT4A6NND4 320 aa16.29■□□□□ 0.2
APP-202ENST00000348990 PRICKLE3O43900 615 aaPredicted RBP16.29■□□□□ 0.2
APP-202ENST00000348990 GLSO94925 669 aaPredicted RBP16.29■□□□□ 0.2
APP-202ENST00000348990 HLA-DQA2P01906 255 aa16.29■□□□□ 0.2
APP-202ENST00000348990 EFNB2P52799 333 aa16.29■□□□□ 0.2
APP-202ENST00000348990 UBE2IP63279 158 aaKnown RBP16.29■□□□□ 0.2
APP-202ENST00000348990 RIPPLY1Q0D2K3 151 aa16.29■□□□□ 0.2
APP-202ENST00000348990 ADAMTSL4Q6UY14 1074 aa16.29■□□□□ 0.2
APP-202ENST00000348990 SAMD14Q8IZD0 417 aaPredicted RBP16.29■□□□□ 0.2
APP-202ENST00000348990 OR2L13Q8N349 312 aa16.29■□□□□ 0.2
APP-202ENST00000348990 MFSD9Q8NBP5 474 aa16.29■□□□□ 0.2
APP-202ENST00000348990 STEAP2Q8NFT2 490 aa16.29■□□□□ 0.2
APP-202ENST00000348990 OR10AC1Q8NH08 325 aa16.29■□□□□ 0.2
APP-202ENST00000348990 SLC25A28Q96A46 364 aa16.29■□□□□ 0.2
APP-202ENST00000348990 COX14Q96I36 57 aa16.29■□□□□ 0.2
APP-202ENST00000348990 RAB11FIP5Q9BXF6 653 aa16.29■□□□□ 0.2
APP-202ENST00000348990 ZCCHC4Q9H5U6 513 aa16.29■□□□□ 0.2
APP-202ENST00000348990 EXOSC3Q9NQT5 275 aaKnown RBP16.29■□□□□ 0.2
APP-202ENST00000348990 AMY2AP04746 511 aa16.29■□□□□ 0.2
APP-202ENST00000348990 CSF1P09603 554 aa16.29■□□□□ 0.2
APP-202ENST00000348990 PGDP52209 483 aa16.29■□□□□ 0.2
APP-202ENST00000348990 NKPD1Q17RQ9 610 aa16.29■□□□□ 0.2
APP-202ENST00000348990 CCDC157Q569K6 752 aa16.29■□□□□ 0.2
APP-202ENST00000348990 ARHGAP40Q5TG30 622 aa16.29■□□□□ 0.2
APP-202ENST00000348990 UNQ6126/PRO20091Q6UXV3 157 aa16.29■□□□□ 0.2
APP-202ENST00000348990 CDRT4Q8N9R6 151 aa16.29■□□□□ 0.2
APP-202ENST00000348990 OR14A16Q8NHC5 309 aa16.29■□□□□ 0.2
APP-202ENST00000348990 WFIKKN2Q8TEU8 576 aa16.29■□□□□ 0.2
APP-202ENST00000348990 FOXN4Q96NZ1 517 aa16.29■□□□□ 0.2
APP-202ENST00000348990 LRRC3BQ96PB8 259 aa16.29■□□□□ 0.2
APP-202ENST00000348990 DNTTIP1Q9H147 329 aa16.29■□□□□ 0.2
APP-202ENST00000348990 COL4A3Q01955 1670 aa16.29■□□□□ 0.2
APP-202ENST00000348990 OR6C65A6NJZ3 312 aa16.29■□□□□ 0.2
APP-202ENST00000348990 RNGTTO60942 597 aaKnown RBP16.29■□□□□ 0.2
APP-202ENST00000348990 EPCAMP16422 314 aa16.29■□□□□ 0.2
APP-202ENST00000348990 ADRA2CP18825 462 aa16.29■□□□□ 0.2
APP-202ENST00000348990 SLC6A19Q695T7 634 aa16.29■□□□□ 0.2
APP-202ENST00000348990 CCDC36Q8IYA8 594 aa16.29■□□□□ 0.2
APP-202ENST00000348990 OR5T3Q8NGG3 340 aa16.29■□□□□ 0.2
APP-202ENST00000348990 RGP1Q92546 391 aaPredicted RBP16.29■□□□□ 0.2
APP-202ENST00000348990 GAL3ST3Q96A11 431 aa16.29■□□□□ 0.2
APP-202ENST00000348990 APMAPQ9HDC9 416 aa16.29■□□□□ 0.2
APP-202ENST00000348990 TMEM74BQ9NUR3 256 aa16.29■□□□□ 0.2
APP-202ENST00000348990 C14orf105Q9NVL8 296 aa16.29■□□□□ 0.2
APP-202ENST00000348990 TRAV8-7A0A075B6U6 113 aa16.28■□□□□ 0.2
APP-202ENST00000348990 CISD3P0C7P0 127 aa16.28■□□□□ 0.2
APP-202ENST00000348990 CALCBP10092 127 aa16.28■□□□□ 0.2
APP-202ENST00000348990 ACRP10323 421 aa16.28■□□□□ 0.2
APP-202ENST00000348990 C2CD4CQ8TF44 421 aa16.28■□□□□ 0.2
APP-202ENST00000348990 VRK1Q99986 396 aaPredicted RBP16.28■□□□□ 0.2
APP-202ENST00000348990 PBX4Q9BYU1 374 aa16.28■□□□□ 0.2
APP-202ENST00000348990 COMMD4Q9H0A8 199 aa16.28■□□□□ 0.2
APP-202ENST00000348990 SLC6A17Q9H1V8 727 aa16.28■□□□□ 0.2
APP-202ENST00000348990 LAMP5Q9UJQ1 280 aa16.28■□□□□ 0.2
APP-202ENST00000348990 H7C417 338 aa16.28■□□□□ 0.2
APP-202ENST00000348990 SLC31A1O15431 190 aa16.28■□□□□ 0.2
APP-202ENST00000348990 ZNF749O43361 778 aa16.28■□□□□ 0.2
APP-202ENST00000348990 MAPK3P27361 379 aaPredicted RBP16.28■□□□□ 0.2
APP-202ENST00000348990 CCKBRP32239 447 aa16.28■□□□□ 0.2
APP-202ENST00000348990 PPM1AP35813 382 aa16.28■□□□□ 0.2
APP-202ENST00000348990 STEAP1BQ6NZ63 245 aa16.28■□□□□ 0.2
APP-202ENST00000348990 OR4N2Q8NGD1 307 aa16.28■□□□□ 0.2
APP-202ENST00000348990 CASTOR1Q8WTX7 329 aa16.28■□□□□ 0.2
APP-202ENST00000348990 CCDC107Q8WV48 283 aa16.28■□□□□ 0.2
APP-202ENST00000348990 C10orf90Q96M02 699 aa16.28■□□□□ 0.2
APP-202ENST00000348990 CMTM3Q96MX0 182 aa16.28■□□□□ 0.2
APP-202ENST00000348990 SLC25A32Q9H2D1 315 aa16.28■□□□□ 0.2
APP-202ENST00000348990 MTFP1Q9UDX5 166 aa16.28■□□□□ 0.2
APP-202ENST00000348990 SPACA6W5XKT8 324 aa16.28■□□□□ 0.2
APP-202ENST00000348990 XIRP2A4UGR9 3374 aa16.28■□□□□ 0.2
APP-202ENST00000348990 A0A0B4J2E0 115 aa16.27■□□□□ 0.2
APP-202ENST00000348990 A0A1B0GX12 115 aa16.27■□□□□ 0.2
APP-202ENST00000348990 RAB3DO95716 219 aa16.27■□□□□ 0.2
APP-202ENST00000348990 PRAMEF17Q5VTA0 474 aa16.27■□□□□ 0.2
APP-202ENST00000348990 POMZP3Q6PJE2 187 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms