RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 AWAT2Q6E213 333 aa10.03□□□□□ -0.8
CLCN6-202ENST00000346436 ZNF582Q96NG8 517 aaPredicted RBP10.03□□□□□ -0.8
CLCN6-202ENST00000346436 C1QTNF2Q9BXJ5 285 aa10.03□□□□□ -0.8
CLCN6-202ENST00000346436 LYRM4Q9HD34 91 aa10.03□□□□□ -0.8
CLCN6-202ENST00000346436 AKIP1Q9NQ31 210 aa10.03□□□□□ -0.8
CLCN6-202ENST00000346436 OTOL1A6NHN0 477 aaPredicted RBP10.03□□□□□ -0.8
CLCN6-202ENST00000346436 RAB3BP20337 219 aa10.03□□□□□ -0.8
CLCN6-202ENST00000346436 NPR2P20594 1047 aa10.03□□□□□ -0.8
CLCN6-202ENST00000346436 REEP5Q00765 189 aa10.03□□□□□ -0.8
CLCN6-202ENST00000346436 ZNF766Q5HY98 468 aa10.03□□□□□ -0.8
CLCN6-202ENST00000346436 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.03□□□□□ -0.8
CLCN6-202ENST00000346436 MNTQ99583 582 aa10.03□□□□□ -0.8
CLCN6-202ENST00000346436 C11orf54Q9H0W9 315 aaPredicted RBP10.03□□□□□ -0.8
CLCN6-202ENST00000346436 RASD1Q9Y272 281 aa10.03□□□□□ -0.8
CLCN6-202ENST00000346436 SLC5A10A0PJK1 596 aa10.02□□□□□ -0.8
CLCN6-202ENST00000346436 PLPP1O14494 284 aa10.02□□□□□ -0.8
CLCN6-202ENST00000346436 NSA2O95478 260 aaKnown RBP10.02□□□□□ -0.8
CLCN6-202ENST00000346436 RAB3AP20336 220 aa10.02□□□□□ -0.8
CLCN6-202ENST00000346436 BCL6P41182 706 aa10.02□□□□□ -0.8
CLCN6-202ENST00000346436 OR5M10Q6IEU7 315 aa10.02□□□□□ -0.8
CLCN6-202ENST00000346436 FAM71E1Q6IPT2 247 aa10.02□□□□□ -0.8
CLCN6-202ENST00000346436 MOB3CQ70IA8 216 aa10.02□□□□□ -0.8
CLCN6-202ENST00000346436 TMPRSS12Q86WS5 348 aa10.02□□□□□ -0.8
CLCN6-202ENST00000346436 ZCCHC14Q8WYQ9 949 aaKnown RBP10.02□□□□□ -0.8
CLCN6-202ENST00000346436 PHB2Q99623 299 aa10.02□□□□□ -0.8
CLCN6-202ENST00000346436 PLEKHA3Q9HB20 300 aa10.02□□□□□ -0.8
CLCN6-202ENST00000346436 MYEF2Q9P2K5 600 aaKnown RBP10.02□□□□□ -0.8
CLCN6-202ENST00000346436 SH2B3Q9UQQ2 575 aa10.02□□□□□ -0.8
CLCN6-202ENST00000346436 NTNG1Q9Y2I2 539 aa10.02□□□□□ -0.8
CLCN6-202ENST00000346436 EIF4E2O60573 245 aaKnown RBP10.02□□□□□ -0.81
CLCN6-202ENST00000346436 AIFM1O95831 613 aa10.02□□□□□ -0.81
CLCN6-202ENST00000346436 PITPNBP48739 271 aa10.02□□□□□ -0.81
CLCN6-202ENST00000346436 S100A10P60903 97 aa10.02□□□□□ -0.81
CLCN6-202ENST00000346436 GDPD3Q7L5L3 318 aa10.02□□□□□ -0.81
CLCN6-202ENST00000346436 CARFQ8N187 725 aa10.02□□□□□ -0.81
CLCN6-202ENST00000346436 OR11G2Q8NGC1 345 aa10.02□□□□□ -0.81
CLCN6-202ENST00000346436 OR52I1Q8NGK6 324 aa10.02□□□□□ -0.81
CLCN6-202ENST00000346436 OR4K15Q8NH41 348 aa10.02□□□□□ -0.81
CLCN6-202ENST00000346436 THAP6Q8TBB0 222 aa10.02□□□□□ -0.81
CLCN6-202ENST00000346436 SNAPC3Q92966 411 aa10.02□□□□□ -0.81
CLCN6-202ENST00000346436 FBXW5Q969U6 566 aa10.02□□□□□ -0.81
CLCN6-202ENST00000346436 GPR87Q9BY21 358 aa10.02□□□□□ -0.81
CLCN6-202ENST00000346436 SPNS1Q9H2V7 528 aa10.02□□□□□ -0.81
CLCN6-202ENST00000346436 SLC6A20Q9NP91 592 aa10.02□□□□□ -0.81
CLCN6-202ENST00000346436 ZNF71Q9NQZ8 489 aaPredicted RBP10.02□□□□□ -0.81
CLCN6-202ENST00000346436 ZNF831Q5JPB2 1677 aa10.02□□□□□ -0.81
CLCN6-202ENST00000346436 M0R233 179 aa10.02□□□□□ -0.81
CLCN6-202ENST00000346436 GABRPO00591 440 aa10.02□□□□□ -0.81
CLCN6-202ENST00000346436 PTGS2P35354 604 aa10.02□□□□□ -0.81
CLCN6-202ENST00000346436 DEFA5Q01523 94 aa10.02□□□□□ -0.81
CLCN6-202ENST00000346436 RAB40BQ12829 278 aa10.02□□□□□ -0.81
CLCN6-202ENST00000346436 TMEM69Q5SWH9 247 aa10.02□□□□□ -0.81
CLCN6-202ENST00000346436 HENMT1Q5T8I9 393 aaKnown RBP10.02□□□□□ -0.81
CLCN6-202ENST00000346436 DHRS4L2Q6PKH6 230 aa10.02□□□□□ -0.81
CLCN6-202ENST00000346436 GDPGP1Q6ZNW5 385 aa10.02□□□□□ -0.81
CLCN6-202ENST00000346436 WDR5BQ86VZ2 330 aa10.02□□□□□ -0.81
CLCN6-202ENST00000346436 TMEM239Q8WW34 195 aa10.02□□□□□ -0.81
CLCN6-202ENST00000346436 KISS1RQ969F8 398 aaPredicted RBP10.02□□□□□ -0.81
CLCN6-202ENST00000346436 NEURL2Q9BR09 285 aa10.02□□□□□ -0.81
CLCN6-202ENST00000346436 GLIPR2Q9H4G4 154 aa10.02□□□□□ -0.81
CLCN6-202ENST00000346436 HAO2Q9NYQ3 351 aa10.02□□□□□ -0.81
CLCN6-202ENST00000346436 OR14J1Q9UGF5 321 aa10.02□□□□□ -0.81
CLCN6-202ENST00000346436 DCDC2BA2VCK2 349 aa10.02□□□□□ -0.81
CLCN6-202ENST00000346436 SLC22A20A6NK97 555 aa10.02□□□□□ -0.81
CLCN6-202ENST00000346436 ENSAO43768 121 aaKnown RBP10.02□□□□□ -0.81
CLCN6-202ENST00000346436 DNAJB6O75190 326 aa10.02□□□□□ -0.81
CLCN6-202ENST00000346436 FBXO45P0C2W1 286 aa10.02□□□□□ -0.81
CLCN6-202ENST00000346436 GABRA1P14867 456 aa10.02□□□□□ -0.81
CLCN6-202ENST00000346436 SSTR2P30874 369 aa10.02□□□□□ -0.81
CLCN6-202ENST00000346436 C8orf82Q6P1X6 216 aaPredicted RBP10.02□□□□□ -0.81
CLCN6-202ENST00000346436 SLC16A12Q6ZSM3 486 aa10.02□□□□□ -0.81
CLCN6-202ENST00000346436 CMIPQ8IY22 773 aa10.02□□□□□ -0.81
CLCN6-202ENST00000346436 SLC7A13Q8TCU3 470 aa10.02□□□□□ -0.81
CLCN6-202ENST00000346436 PSMF1Q92530 271 aa10.02□□□□□ -0.81
CLCN6-202ENST00000346436 C4orf36Q96KX1 117 aa10.02□□□□□ -0.81
CLCN6-202ENST00000346436 THAP7Q9BT49 309 aaPredicted RBP10.02□□□□□ -0.81
CLCN6-202ENST00000346436 TMEM43Q9BTV4 400 aa10.02□□□□□ -0.81
CLCN6-202ENST00000346436 CHST8Q9H2A9 424 aa10.02□□□□□ -0.81
CLCN6-202ENST00000346436 OR52D1Q9H346 318 aa10.02□□□□□ -0.81
CLCN6-202ENST00000346436 C1orf198Q9H425 327 aa10.02□□□□□ -0.81
CLCN6-202ENST00000346436 ZFP57Q9NU63 452 aa10.02□□□□□ -0.81
CLCN6-202ENST00000346436 KLK4Q9Y5K2 254 aa10.02□□□□□ -0.81
CLCN6-202ENST00000346436 BORCS7-ASMTA0A0B4J1R7 106 aa10.01□□□□□ -0.81
CLCN6-202ENST00000346436 PRRT4C9JH25 899 aa10.01□□□□□ -0.81
CLCN6-202ENST00000346436 SOCS6O14544 535 aa10.01□□□□□ -0.81
CLCN6-202ENST00000346436 PIP5K1CO60331 668 aa10.01□□□□□ -0.81
CLCN6-202ENST00000346436 ZNF780AO75290 641 aaPredicted RBP10.01□□□□□ -0.81
CLCN6-202ENST00000346436 UTS2O95399 124 aa10.01□□□□□ -0.81
CLCN6-202ENST00000346436 ACP2P11117 423 aa10.01□□□□□ -0.81
CLCN6-202ENST00000346436 MMP11P24347 488 aa10.01□□□□□ -0.81
CLCN6-202ENST00000346436 MS4A15Q8N5U1 240 aa10.01□□□□□ -0.81
CLCN6-202ENST00000346436 BORCS7Q96B45 105 aa10.01□□□□□ -0.81
CLCN6-202ENST00000346436 INTS14Q96SY0 518 aa10.01□□□□□ -0.81
CLCN6-202ENST00000346436 ATG5Q9H1Y0 275 aa10.01□□□□□ -0.81
CLCN6-202ENST00000346436 ESRP2Q9H6T0 727 aaKnown RBP10.01□□□□□ -0.81
CLCN6-202ENST00000346436 ZC3H12DA2A288 527 aaKnown RBP10.01□□□□□ -0.81
CLCN6-202ENST00000346436 RNF212BA8MTL3 300 aa10.01□□□□□ -0.81
CLCN6-202ENST00000346436 B4DXG7 233 aa10.01□□□□□ -0.81
CLCN6-202ENST00000346436 UPK1AO00322 258 aa10.01□□□□□ -0.81
CLCN6-202ENST00000346436 CD22P20273 847 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms