RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 JSRP1Q96MG2 331 aaPredicted RBP13.25□□□□□ -0.29
CXCL12-201ENST00000343575 Q96MT0 163 aa13.25□□□□□ -0.29
CXCL12-201ENST00000343575 OR52D1Q9H346 318 aa13.25□□□□□ -0.29
CXCL12-201ENST00000343575 PTGES2Q9H7Z7 377 aa13.25□□□□□ -0.29
CXCL12-201ENST00000343575 MCCC2Q9HCC0 563 aa13.25□□□□□ -0.29
CXCL12-201ENST00000343575 ZNF226Q9NYT6 803 aa13.25□□□□□ -0.29
CXCL12-201ENST00000343575 CHRNA9Q9UGM1 479 aa13.25□□□□□ -0.29
CXCL12-201ENST00000343575 CDH10Q9Y6N8 788 aa13.25□□□□□ -0.29
CXCL12-201ENST00000343575 MEIOCA2RUB1 952 aa13.24□□□□□ -0.29
CXCL12-201ENST00000343575 ARHGEF9O43307 516 aa13.24□□□□□ -0.29
CXCL12-201ENST00000343575 CBR3O75828 277 aa13.24□□□□□ -0.29
CXCL12-201ENST00000343575 OR7A10O76100 309 aa13.24□□□□□ -0.29
CXCL12-201ENST00000343575 BGLAPP02818 100 aa13.24□□□□□ -0.29
CXCL12-201ENST00000343575 STSP08842 583 aa13.24□□□□□ -0.29
CXCL12-201ENST00000343575 ASAH2BP0C7U1 165 aa13.24□□□□□ -0.29
CXCL12-201ENST00000343575 SAGP10523 405 aaPredicted RBP13.24□□□□□ -0.29
CXCL12-201ENST00000343575 DPP4P27487 766 aa13.24□□□□□ -0.29
CXCL12-201ENST00000343575 GRK5P34947 590 aa13.24□□□□□ -0.29
CXCL12-201ENST00000343575 CASRP41180 1078 aa13.24□□□□□ -0.29
CXCL12-201ENST00000343575 RORCP51449 518 aa13.24□□□□□ -0.29
CXCL12-201ENST00000343575 CDC42P60953 191 aa13.24□□□□□ -0.29
CXCL12-201ENST00000343575 EFNB1P98172 346 aa13.24□□□□□ -0.29
CXCL12-201ENST00000343575 GINS1Q14691 196 aa13.24□□□□□ -0.29
CXCL12-201ENST00000343575 TBRG1Q3YBR2 411 aa13.24□□□□□ -0.29
CXCL12-201ENST00000343575 GXYLT1Q4G148 440 aa13.24□□□□□ -0.29
CXCL12-201ENST00000343575 CLEC12AQ5QGZ9 265 aa13.24□□□□□ -0.29
CXCL12-201ENST00000343575 SPATC1Q76KD6 591 aa13.24□□□□□ -0.29
CXCL12-201ENST00000343575 NRARPQ7Z6K4 114 aa13.24□□□□□ -0.29
CXCL12-201ENST00000343575 SULF2Q8IWU5 870 aa13.24□□□□□ -0.29
CXCL12-201ENST00000343575 CDK20Q8IZL9 346 aa13.24□□□□□ -0.29
CXCL12-201ENST00000343575 OR2M7Q8NG81 312 aa13.24□□□□□ -0.29
CXCL12-201ENST00000343575 OR4Q3Q8NH05 313 aa13.24□□□□□ -0.29
CXCL12-201ENST00000343575 SAMD8Q96LT4 415 aa13.24□□□□□ -0.29
CXCL12-201ENST00000343575 MGLLQ99685 303 aa13.24□□□□□ -0.29
CXCL12-201ENST00000343575 HHATLQ9HCP6 504 aa13.24□□□□□ -0.29
CXCL12-201ENST00000343575 KRCC1Q9NPI7 259 aaPredicted RBP13.24□□□□□ -0.29
CXCL12-201ENST00000343575 CCDC182A6NF36 153 aa13.23□□□□□ -0.29
CXCL12-201ENST00000343575 A8MVM7 634 aa13.23□□□□□ -0.29
CXCL12-201ENST00000343575 CDK2AP1O14519 115 aa13.23□□□□□ -0.29
CXCL12-201ENST00000343575 SEC14L5O43304 696 aa13.23□□□□□ -0.29
CXCL12-201ENST00000343575 PTHP01270 115 aa13.23□□□□□ -0.29
CXCL12-201ENST00000343575 IL7P13232 177 aa13.23□□□□□ -0.29
CXCL12-201ENST00000343575 ERP29P30040 261 aaKnown RBP13.23□□□□□ -0.29
CXCL12-201ENST00000343575 DSCR4P56555 118 aaPredicted RBP13.23□□□□□ -0.29
CXCL12-201ENST00000343575 RPS4XP62701 263 aaKnown RBP13.23□□□□□ -0.29
CXCL12-201ENST00000343575 RIPPLY1Q0D2K3 151 aa13.23□□□□□ -0.29
CXCL12-201ENST00000343575 OAFQ86UD1 273 aa13.23□□□□□ -0.29
CXCL12-201ENST00000343575 GTPBP8Q8N3Z3 284 aaPredicted RBP13.23□□□□□ -0.29
CXCL12-201ENST00000343575 GDPD1Q8N9F7 314 aa13.23□□□□□ -0.29
CXCL12-201ENST00000343575 SLC7A6Q92536 515 aa13.23□□□□□ -0.29
CXCL12-201ENST00000343575 TSSK6Q9BXA6 273 aa13.23□□□□□ -0.29
CXCL12-201ENST00000343575 SLC25A19Q9HC21 320 aa13.23□□□□□ -0.29
CXCL12-201ENST00000343575 KLHL1Q9NR64 748 aa13.23□□□□□ -0.29
CXCL12-201ENST00000343575 CLN6Q9NWW5 311 aa13.23□□□□□ -0.29
CXCL12-201ENST00000343575 SEC14L4Q9UDX3 406 aa13.23□□□□□ -0.29
CXCL12-201ENST00000343575 RPH3AQ9Y2J0 694 aaPredicted RBP13.23□□□□□ -0.29
CXCL12-201ENST00000343575 NCOR2Q9Y618 2525 aa13.23□□□□□ -0.29
CXCL12-201ENST00000343575 IQCMA0A1B0GVH7 501 aa13.23□□□□□ -0.29
CXCL12-201ENST00000343575 FTCDNL1E5RQL4 147 aa13.23□□□□□ -0.29
CXCL12-201ENST00000343575 BHLHE40O14503 412 aa13.23□□□□□ -0.29
CXCL12-201ENST00000343575 NME2P1O60361 137 aa13.23□□□□□ -0.29
CXCL12-201ENST00000343575 SP1P08047 785 aa13.23□□□□□ -0.29
CXCL12-201ENST00000343575 TSPAN19P0C672 248 aa13.23□□□□□ -0.29
CXCL12-201ENST00000343575 NME2P22392 152 aa13.23□□□□□ -0.29
CXCL12-201ENST00000343575 HLA-DMAP28067 261 aa13.23□□□□□ -0.29
CXCL12-201ENST00000343575 ADH6P28332 368 aa13.23□□□□□ -0.29
CXCL12-201ENST00000343575 SHC1P29353 583 aa13.23□□□□□ -0.29
CXCL12-201ENST00000343575 PLA2G5P39877 138 aa13.23□□□□□ -0.29
CXCL12-201ENST00000343575 B3GALT5-AS1P59052 145 aa13.23□□□□□ -0.29
CXCL12-201ENST00000343575 C1orf140Q5VVS0 124 aa13.23□□□□□ -0.29
CXCL12-201ENST00000343575 MEDAGQ5VYS4 303 aa13.23□□□□□ -0.29
CXCL12-201ENST00000343575 RNLSQ5VYX0 342 aa13.23□□□□□ -0.29
CXCL12-201ENST00000343575 ATCAYQ86WG3 371 aa13.23□□□□□ -0.29
CXCL12-201ENST00000343575 TCTE3Q8IZS6 198 aa13.23□□□□□ -0.29
CXCL12-201ENST00000343575 STK35Q8TDR2 534 aa13.23□□□□□ -0.29
CXCL12-201ENST00000343575 RNF170Q96K19 258 aa13.23□□□□□ -0.29
CXCL12-201ENST00000343575 FAM173AQ9BQD7 235 aa13.23□□□□□ -0.29
CXCL12-201ENST00000343575 TAPBPLQ9BX59 468 aa13.23□□□□□ -0.29
CXCL12-201ENST00000343575 CCDC86Q9H6F5 360 aaKnown RBP13.23□□□□□ -0.29
CXCL12-201ENST00000343575 ZFP64Q9NPA5 681 aa13.23□□□□□ -0.29
CXCL12-201ENST00000343575 RPRD1BQ9NQG5 326 aaKnown RBP13.23□□□□□ -0.29
CXCL12-201ENST00000343575 KLHL21Q9UJP4 597 aa13.23□□□□□ -0.29
CXCL12-201ENST00000343575 TRAV36DV7A0A075B6V5 113 aa13.22□□□□□ -0.29
CXCL12-201ENST00000343575 A0A087WZY1 265 aa13.22□□□□□ -0.29
CXCL12-201ENST00000343575 ZNF208O43345 1280 aa13.22□□□□□ -0.29
CXCL12-201ENST00000343575 SCG5P05408 212 aa13.22□□□□□ -0.29
CXCL12-201ENST00000343575 M6PRP20645 277 aa13.22□□□□□ -0.29
CXCL12-201ENST00000343575 TNFSF10P50591 281 aa13.22□□□□□ -0.29
CXCL12-201ENST00000343575 TLE3Q04726 772 aa13.22□□□□□ -0.29
CXCL12-201ENST00000343575 SLC25A25Q6KCM7 469 aa13.22□□□□□ -0.29
CXCL12-201ENST00000343575 SMARCD3Q6STE5 483 aa13.22□□□□□ -0.29
CXCL12-201ENST00000343575 GALNTL5Q7Z4T8 443 aa13.22□□□□□ -0.29
CXCL12-201ENST00000343575 RDH10Q8IZV5 341 aa13.22□□□□□ -0.29
CXCL12-201ENST00000343575 OR9Q1Q8NGQ5 310 aa13.22□□□□□ -0.29
CXCL12-201ENST00000343575 FANK1Q8TC84 345 aa13.22□□□□□ -0.29
CXCL12-201ENST00000343575 OSTF1Q92882 214 aa13.22□□□□□ -0.29
CXCL12-201ENST00000343575 ZBTB8AQ96BR9 441 aa13.22□□□□□ -0.29
CXCL12-201ENST00000343575 SCMH1Q96GD3 660 aa13.22□□□□□ -0.29
CXCL12-201ENST00000343575 NIPAL2Q9H841 368 aa13.22□□□□□ -0.29
CXCL12-201ENST00000343575 ERVK13-1Q9NX77 482 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms