RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 PPA2Q9H2U2 334 aa13.84□□□□□ -0.19
UBE3B-202ENST00000342494 ATPIF1Q9UII2 106 aa13.84□□□□□ -0.19
UBE3B-202ENST00000342494 COL16A1Q07092 1604 aaPredicted RBP13.84□□□□□ -0.19
UBE3B-202ENST00000342494 AKR7A3O95154 331 aa13.84□□□□□ -0.19
UBE3B-202ENST00000342494 MT-ND4P03905 459 aa13.84□□□□□ -0.19
UBE3B-202ENST00000342494 SNRPD2P62316 118 aaKnown RBP13.84□□□□□ -0.19
UBE3B-202ENST00000342494 EDDM3AQ14507 147 aa13.84□□□□□ -0.19
UBE3B-202ENST00000342494 ACTBL2Q562R1 376 aa13.84□□□□□ -0.19
UBE3B-202ENST00000342494 TMEM255BQ8WV15 326 aa13.84□□□□□ -0.19
UBE3B-202ENST00000342494 NOX3Q9HBY0 568 aa13.84□□□□□ -0.19
UBE3B-202ENST00000342494 TRGV8A0A0C4DH27 118 aa13.84□□□□□ -0.19
UBE3B-202ENST00000342494 TSPAN11A1L157 253 aa13.84□□□□□ -0.19
UBE3B-202ENST00000342494 SLC10A1Q14973 349 aa13.84□□□□□ -0.19
UBE3B-202ENST00000342494 B3GLCTQ6Y288 498 aa13.84□□□□□ -0.19
UBE3B-202ENST00000342494 A0A1W2PPC4 97 aa13.84□□□□□ -0.19
UBE3B-202ENST00000342494 LRIT2A6NDA9 550 aa13.84□□□□□ -0.19
UBE3B-202ENST00000342494 MT-ATP6P00846 226 aa13.84□□□□□ -0.19
UBE3B-202ENST00000342494 FKBP2P26885 142 aaKnown RBP13.84□□□□□ -0.19
UBE3B-202ENST00000342494 P2RX1P51575 399 aa13.84□□□□□ -0.19
UBE3B-202ENST00000342494 RAB5BP61020 215 aa13.84□□□□□ -0.19
UBE3B-202ENST00000342494 OR7G2Q8NG99 324 aa13.84□□□□□ -0.19
UBE3B-202ENST00000342494 STT3BQ8TCJ2 826 aa13.84□□□□□ -0.19
UBE3B-202ENST00000342494 TFAP2CQ92754 450 aa13.84□□□□□ -0.19
UBE3B-202ENST00000342494 TMEM106AQ96A25 262 aa13.84□□□□□ -0.19
UBE3B-202ENST00000342494 KIAA0100Q14667 2235 aaKnown RBP13.84□□□□□ -0.19
UBE3B-202ENST00000342494 MYH6P13533 1939 aa13.84□□□□□ -0.19
UBE3B-202ENST00000342494 AGPAT2O15120 278 aa13.83□□□□□ -0.19
UBE3B-202ENST00000342494 LINC01565O15544 149 aa13.83□□□□□ -0.19
UBE3B-202ENST00000342494 SPINT2O43291 252 aa13.83□□□□□ -0.19
UBE3B-202ENST00000342494 RGS11O94810 467 aa13.83□□□□□ -0.19
UBE3B-202ENST00000342494 OLFM2O95897 454 aa13.83□□□□□ -0.19
UBE3B-202ENST00000342494 HLA-AP01891 365 aaKnown RBP13.83□□□□□ -0.19
UBE3B-202ENST00000342494 FOXK2Q01167 660 aa13.83□□□□□ -0.19
UBE3B-202ENST00000342494 CRMP1Q14194 572 aa13.83□□□□□ -0.19
UBE3B-202ENST00000342494 SLC9A3R2Q15599 337 aa13.83□□□□□ -0.19
UBE3B-202ENST00000342494 UBE2NLQ5JXB2 153 aa13.83□□□□□ -0.19
UBE3B-202ENST00000342494 GDF7Q7Z4P5 450 aa13.83□□□□□ -0.19
UBE3B-202ENST00000342494 CCDC28AQ8IWP9 274 aa13.83□□□□□ -0.19
UBE3B-202ENST00000342494 ETFBKMTQ8IXQ9 262 aa13.83□□□□□ -0.19
UBE3B-202ENST00000342494 OR6V1Q8N148 313 aa13.83□□□□□ -0.19
UBE3B-202ENST00000342494 OR6T1Q8NGN1 323 aa13.83□□□□□ -0.19
UBE3B-202ENST00000342494 STACQ99469 402 aa13.83□□□□□ -0.19
UBE3B-202ENST00000342494 C1QTNF6Q9BXI9 259 aa13.83□□□□□ -0.19
UBE3B-202ENST00000342494 MMP28Q9H239 520 aa13.83□□□□□ -0.19
UBE3B-202ENST00000342494 A6NHS1 94 aa13.83□□□□□ -0.2
UBE3B-202ENST00000342494 GNB3P16520 340 aa13.83□□□□□ -0.2
UBE3B-202ENST00000342494 NFYBP25208 207 aa13.83□□□□□ -0.2
UBE3B-202ENST00000342494 APOBEC1P41238 236 aaKnown RBP13.83□□□□□ -0.2
UBE3B-202ENST00000342494 TAS2R30P59541 319 aa13.83□□□□□ -0.2
UBE3B-202ENST00000342494 DYRK1AQ13627 763 aa13.83□□□□□ -0.2
UBE3B-202ENST00000342494 HEPHL1Q6MZM0 1159 aa13.83□□□□□ -0.2
UBE3B-202ENST00000342494 KANSL1Q7Z3B3 1105 aa13.83□□□□□ -0.2
UBE3B-202ENST00000342494 P2RY12Q9H244 342 aa13.83□□□□□ -0.2
UBE3B-202ENST00000342494 DAPP1Q9UN19 280 aa13.83□□□□□ -0.2
UBE3B-202ENST00000342494 PPIAP62937 165 aaKnown RBP13.83□□□□□ -0.2
UBE3B-202ENST00000342494 DPTQ07507 201 aa13.83□□□□□ -0.2
UBE3B-202ENST00000342494 GK2Q14410 553 aaPredicted RBP13.83□□□□□ -0.2
UBE3B-202ENST00000342494 ZNF836Q6ZNA1 936 aa13.83□□□□□ -0.2
UBE3B-202ENST00000342494 BHLHE23Q8NDY6 225 aa13.83□□□□□ -0.2
UBE3B-202ENST00000342494 CHTF18Q8WVB6 975 aa13.83□□□□□ -0.2
UBE3B-202ENST00000342494 OR51J1Q9H342 316 aa13.83□□□□□ -0.2
UBE3B-202ENST00000342494 PRELID3BQ9Y3B1 194 aa13.83□□□□□ -0.2
UBE3B-202ENST00000342494 MYO10Q9HD67 2058 aa13.83□□□□□ -0.2
UBE3B-202ENST00000342494 FZD7O75084 574 aa13.83□□□□□ -0.2
UBE3B-202ENST00000342494 UBCP0CG48 685 aaKnown RBP13.83□□□□□ -0.2
UBE3B-202ENST00000342494 NDUFB7P17568 137 aa13.83□□□□□ -0.2
UBE3B-202ENST00000342494 SLC19A1P41440 591 aa13.83□□□□□ -0.2
UBE3B-202ENST00000342494 FGFBP1Q14512 234 aa13.83□□□□□ -0.2
UBE3B-202ENST00000342494 VWA2Q5GFL6 755 aa13.83□□□□□ -0.2
UBE3B-202ENST00000342494 PM20D2Q8IYS1 436 aa13.83□□□□□ -0.2
UBE3B-202ENST00000342494 C8orf44Q96CB5 159 aa13.83□□□□□ -0.2
UBE3B-202ENST00000342494 TRIB1Q96RU8 372 aa13.83□□□□□ -0.2
UBE3B-202ENST00000342494 BARHL1Q9BZE3 327 aa13.83□□□□□ -0.2
UBE3B-202ENST00000342494 WWTR1Q9GZV5 400 aa13.83□□□□□ -0.2
UBE3B-202ENST00000342494 NT5DC2Q9H857 520 aa13.83□□□□□ -0.2
UBE3B-202ENST00000342494 ATP23Q9Y6H3 246 aa13.83□□□□□ -0.2
UBE3B-202ENST00000342494 PMS2P1A4D2B8 440 aa13.83□□□□□ -0.2
UBE3B-202ENST00000342494 FIGNL2A6NMB9 653 aa13.83□□□□□ -0.2
UBE3B-202ENST00000342494 PLPP1O14494 284 aa13.83□□□□□ -0.2
UBE3B-202ENST00000342494 TAPBPO15533 448 aa13.83□□□□□ -0.2
UBE3B-202ENST00000342494 EPHA5P54756 1037 aa13.83□□□□□ -0.2
UBE3B-202ENST00000342494 EMX1Q04741 257 aaPredicted RBP13.83□□□□□ -0.2
UBE3B-202ENST00000342494 TBCEQ15813 527 aaPredicted RBP13.83□□□□□ -0.2
UBE3B-202ENST00000342494 GLYR1Q49A26 553 aaPredicted RBP13.83□□□□□ -0.2
UBE3B-202ENST00000342494 COX20Q5RI15 118 aa13.83□□□□□ -0.2
UBE3B-202ENST00000342494 Q6ZPB1 254 aaPredicted RBP13.83□□□□□ -0.2
UBE3B-202ENST00000342494 HRASLS5Q96KN8 279 aa13.83□□□□□ -0.2
UBE3B-202ENST00000342494 NDRG4Q9ULP0 352 aaKnown RBP13.83□□□□□ -0.2
UBE3B-202ENST00000342494 OR51B4Q9Y5P0 310 aa13.83□□□□□ -0.2
UBE3B-202ENST00000342494 MYH10P35580 1976 aa13.82□□□□□ -0.2
UBE3B-202ENST00000342494 SLC5A10A0PJK1 596 aa13.82□□□□□ -0.2
UBE3B-202ENST00000342494 F8W036 122 aa13.82□□□□□ -0.2
UBE3B-202ENST00000342494 H3BMQ9 156 aa13.82□□□□□ -0.2
UBE3B-202ENST00000342494 NFYAP23511 347 aaPredicted RBP13.82□□□□□ -0.2
UBE3B-202ENST00000342494 RAD52P43351 418 aa13.82□□□□□ -0.2
UBE3B-202ENST00000342494 BLOC1S1P78537 153 aa13.82□□□□□ -0.2
UBE3B-202ENST00000342494 CAMK2BQ13554 666 aa13.82□□□□□ -0.2
UBE3B-202ENST00000342494 MEP1BQ16820 701 aa13.82□□□□□ -0.2
UBE3B-202ENST00000342494 ZNF674Q2M3X9 581 aa13.82□□□□□ -0.2
UBE3B-202ENST00000342494 FAM71E1Q6IPT2 247 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms