RNA–Protein interactions for RNA: ENST00000342409.3

FRMD4A-202, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 1,741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-202ENST00000342409 NDNFQ8TB73 568 aa15.41■□□□□ 0.06
FRMD4A-202ENST00000342409 GATAD2BQ8WXI9 593 aa15.41■□□□□ 0.06
FRMD4A-202ENST00000342409 FER1L6-AS2Q96M78 137 aa15.41■□□□□ 0.06
FRMD4A-202ENST00000342409 TBX5Q99593 518 aa15.41■□□□□ 0.06
FRMD4A-202ENST00000342409 ARHGAP9Q9BRR9 750 aa15.41■□□□□ 0.06
FRMD4A-202ENST00000342409 RACGAP1Q9H0H5 632 aa15.41■□□□□ 0.06
FRMD4A-202ENST00000342409 TXNIPQ9H3M7 391 aa15.41■□□□□ 0.06
FRMD4A-202ENST00000342409 WDR70Q9NW82 654 aa15.41■□□□□ 0.06
FRMD4A-202ENST00000342409 ALKBH4Q9NXW9 302 aa15.41■□□□□ 0.06
FRMD4A-202ENST00000342409 PLA2G3Q9NZ20 509 aa15.41■□□□□ 0.06
FRMD4A-202ENST00000342409 LRFN1Q9P244 771 aa15.41■□□□□ 0.06
FRMD4A-202ENST00000342409 ZNF814B7Z6K7 855 aa15.4■□□□□ 0.06
FRMD4A-202ENST00000342409 M0R3G1 203 aa15.4■□□□□ 0.06
FRMD4A-202ENST00000342409 AKR7A3O95154 331 aa15.4■□□□□ 0.06
FRMD4A-202ENST00000342409 WDPCPO95876 746 aa15.4■□□□□ 0.06
FRMD4A-202ENST00000342409 ZNF182P17025 639 aaPredicted RBP15.4■□□□□ 0.06
FRMD4A-202ENST00000342409 KLK2P20151 261 aa15.4■□□□□ 0.06
FRMD4A-202ENST00000342409 HCCSP53701 268 aa15.4■□□□□ 0.06
FRMD4A-202ENST00000342409 NHLH1Q02575 133 aa15.4■□□□□ 0.06
FRMD4A-202ENST00000342409 RUNX1T1Q06455 604 aa15.4■□□□□ 0.06
FRMD4A-202ENST00000342409 PUDPQ08623 228 aa15.4■□□□□ 0.06
FRMD4A-202ENST00000342409 SLC35D3Q5M8T2 416 aa15.4■□□□□ 0.06
FRMD4A-202ENST00000342409 SSX6Q7RTT6 188 aa15.4■□□□□ 0.06
FRMD4A-202ENST00000342409 OR52N1Q8NH53 320 aa15.4■□□□□ 0.06
FRMD4A-202ENST00000342409 SMPDL3BQ92485 455 aa15.4■□□□□ 0.06
FRMD4A-202ENST00000342409 C5orf34Q96MH7 638 aa15.4■□□□□ 0.06
FRMD4A-202ENST00000342409 HES7Q9BYE0 225 aa15.4■□□□□ 0.06
FRMD4A-202ENST00000342409 NDEL1Q9GZM8 345 aa15.4■□□□□ 0.06
FRMD4A-202ENST00000342409 ISG20L2Q9H9L3 353 aaKnown RBP15.4■□□□□ 0.06
FRMD4A-202ENST00000342409 FANCFQ9NPI8 374 aa15.4■□□□□ 0.06
FRMD4A-202ENST00000342409 B3GAT1Q9P2W7 334 aa15.4■□□□□ 0.06
FRMD4A-202ENST00000342409 DCHS1Q96JQ0 3298 aa15.4■□□□□ 0.06
FRMD4A-202ENST00000342409 SPTBN2O15020 2390 aa15.4■□□□□ 0.06
FRMD4A-202ENST00000342409 ARGFXA6NJG6 315 aa15.4■□□□□ 0.06
FRMD4A-202ENST00000342409 FAM171A2A8MVW0 826 aa15.4■□□□□ 0.06
FRMD4A-202ENST00000342409 CCRL2O00421 344 aa15.4■□□□□ 0.06
FRMD4A-202ENST00000342409 LRRTM2O43300 516 aa15.4■□□□□ 0.06
FRMD4A-202ENST00000342409 AIREO43918 545 aa15.4■□□□□ 0.06
FRMD4A-202ENST00000342409 GLCEO94923 617 aa15.4■□□□□ 0.06
FRMD4A-202ENST00000342409 CNR1P21554 472 aa15.4■□□□□ 0.06
FRMD4A-202ENST00000342409 SFTPDP35247 375 aa15.4■□□□□ 0.06
FRMD4A-202ENST00000342409 MELKQ14680 651 aa15.4■□□□□ 0.06
FRMD4A-202ENST00000342409 TMEM176BQ3YBM2 270 aaPredicted RBP15.4■□□□□ 0.06
FRMD4A-202ENST00000342409 ZNF322Q6U7Q0 402 aaPredicted RBP15.4■□□□□ 0.06
FRMD4A-202ENST00000342409 LINC00696Q6ZRV3 163 aa15.4■□□□□ 0.06
FRMD4A-202ENST00000342409 PHC2Q8IXK0 858 aa15.4■□□□□ 0.06
FRMD4A-202ENST00000342409 OR6V1Q8N148 313 aa15.4■□□□□ 0.06
FRMD4A-202ENST00000342409 OR10H4Q8NGA5 316 aa15.4■□□□□ 0.06
FRMD4A-202ENST00000342409 SLC25A43Q8WUT9 341 aaPredicted RBP15.4■□□□□ 0.06
FRMD4A-202ENST00000342409 SPRYD4Q8WW59 207 aaPredicted RBP15.4■□□□□ 0.06
FRMD4A-202ENST00000342409 OR5B2Q96R09 309 aa15.4■□□□□ 0.06
FRMD4A-202ENST00000342409 RNF167Q9H6Y7 350 aa15.4■□□□□ 0.06
FRMD4A-202ENST00000342409 ISYNA1Q9NPH2 558 aa15.4■□□□□ 0.06
FRMD4A-202ENST00000342409 CHCHD3Q9NX63 227 aaKnown RBP15.4■□□□□ 0.06
FRMD4A-202ENST00000342409 TEKT2Q9UIF3 430 aa15.4■□□□□ 0.06
FRMD4A-202ENST00000342409 DKKL1Q9UK85 242 aa15.4■□□□□ 0.06
FRMD4A-202ENST00000342409 SPIN1Q9Y657 262 aaPredicted RBP15.4■□□□□ 0.06
FRMD4A-202ENST00000342409 ZNF407Q9C0G0 2248 aa15.4■□□□□ 0.06
FRMD4A-202ENST00000342409 LOC400499M0QZD8 3231 aa15.39■□□□□ 0.05
FRMD4A-202ENST00000342409 DNAJC13O75165 2243 aa15.39■□□□□ 0.05
FRMD4A-202ENST00000342409 CACNA1CQ13936 2221 aa15.39■□□□□ 0.05
FRMD4A-202ENST00000342409 ARHGEF9O43307 516 aa15.39■□□□□ 0.05
FRMD4A-202ENST00000342409 SELENOFO60613 162 aa15.39■□□□□ 0.05
FRMD4A-202ENST00000342409 GPX5O75715 221 aa15.39■□□□□ 0.05
FRMD4A-202ENST00000342409 OR6A2O95222 327 aa15.39■□□□□ 0.05
FRMD4A-202ENST00000342409 CPEP16870 476 aa15.39■□□□□ 0.05
FRMD4A-202ENST00000342409 SRD5A2P31213 254 aa15.39■□□□□ 0.05
FRMD4A-202ENST00000342409 ACVR1BP36896 505 aa15.39■□□□□ 0.05
FRMD4A-202ENST00000342409 CLK1P49759 484 aaKnown RBP15.39■□□□□ 0.05
FRMD4A-202ENST00000342409 SOX8P57073 446 aa15.39■□□□□ 0.05
FRMD4A-202ENST00000342409 TLE3Q04726 772 aa15.39■□□□□ 0.05
FRMD4A-202ENST00000342409 LGALS3BPQ08380 585 aa15.39■□□□□ 0.05
FRMD4A-202ENST00000342409 C1DQ13901 141 aaKnown RBP15.39■□□□□ 0.05
FRMD4A-202ENST00000342409 GALEQ14376 348 aa15.39■□□□□ 0.05
FRMD4A-202ENST00000342409 PM20D2Q8IYS1 436 aa15.39■□□□□ 0.05
FRMD4A-202ENST00000342409 GALNT16Q8N428 558 aa15.39■□□□□ 0.05
FRMD4A-202ENST00000342409 KLHL36Q8N4N3 616 aa15.39■□□□□ 0.05
FRMD4A-202ENST00000342409 CLEC1AQ8NC01 280 aa15.39■□□□□ 0.05
FRMD4A-202ENST00000342409 NXPE2Q96DL1 559 aa15.39■□□□□ 0.05
FRMD4A-202ENST00000342409 TRMT61AQ96FX7 289 aaKnown RBP15.39■□□□□ 0.05
FRMD4A-202ENST00000342409 UTP23Q9BRU9 249 aaKnown RBP15.39■□□□□ 0.05
FRMD4A-202ENST00000342409 ALG12Q9BV10 488 aa15.39■□□□□ 0.05
FRMD4A-202ENST00000342409 ALG8Q9BVK2 526 aa15.39■□□□□ 0.05
FRMD4A-202ENST00000342409 TIMMDC1Q9NPL8 285 aa15.39■□□□□ 0.05
FRMD4A-202ENST00000342409 NDUFB11Q9NX14 153 aa15.39■□□□□ 0.05
FRMD4A-202ENST00000342409 ZMIZ1Q9ULJ6 1067 aa15.39■□□□□ 0.05
FRMD4A-202ENST00000342409 SF3B6Q9Y3B4 125 aaKnown RBP15.39■□□□□ 0.05
FRMD4A-202ENST00000342409 A0A1W2PQL4 384 aaPredicted RBP15.38■□□□□ 0.05
FRMD4A-202ENST00000342409 SLC22A1O15245 554 aa15.38■□□□□ 0.05
FRMD4A-202ENST00000342409 RAMP1O60894 148 aa15.38■□□□□ 0.05
FRMD4A-202ENST00000342409 ZNF17P17021 662 aa15.38■□□□□ 0.05
FRMD4A-202ENST00000342409 NAA10P41227 235 aaPredicted RBP15.38■□□□□ 0.05
FRMD4A-202ENST00000342409 POU4F2Q12837 409 aa15.38■□□□□ 0.05
FRMD4A-202ENST00000342409 TPBGQ13641 420 aa15.38■□□□□ 0.05
FRMD4A-202ENST00000342409 PON3Q15166 354 aa15.38■□□□□ 0.05
FRMD4A-202ENST00000342409 ZNF239Q16600 458 aaKnown RBP15.38■□□□□ 0.05
FRMD4A-202ENST00000342409 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.38■□□□□ 0.05
FRMD4A-202ENST00000342409 LCN1P1Q5VSP4 162 aa15.38■□□□□ 0.05
FRMD4A-202ENST00000342409 EEF1A1P5Q5VTE0 462 aa15.38■□□□□ 0.05
FRMD4A-202ENST00000342409 LIPKQ5VXJ0 399 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms