RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 TANGO2Q6ICL3 276 aa12.96□□□□□ -0.33
PCDH8-201ENST00000338862 VN1R4Q7Z5H5 301 aa12.96□□□□□ -0.33
PCDH8-201ENST00000338862 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.96□□□□□ -0.33
PCDH8-201ENST00000338862 SAMD14Q8IZD0 417 aaPredicted RBP12.96□□□□□ -0.33
PCDH8-201ENST00000338862 TMEM52Q8NDY8 209 aa12.96□□□□□ -0.33
PCDH8-201ENST00000338862 MMABQ96EY8 250 aaPredicted RBP12.96□□□□□ -0.33
PCDH8-201ENST00000338862 LRRC46Q96FV0 321 aa12.96□□□□□ -0.33
PCDH8-201ENST00000338862 PRSS27Q9BQR3 290 aa12.96□□□□□ -0.33
PCDH8-201ENST00000338862 ADAT1Q9BUB4 502 aaKnown RBP12.96□□□□□ -0.33
PCDH8-201ENST00000338862 C11orf49Q9H6J7 331 aa12.96□□□□□ -0.33
PCDH8-201ENST00000338862 OR5V1Q9UGF6 321 aa12.96□□□□□ -0.33
PCDH8-201ENST00000338862 KCNE5Q9UJ90 142 aa12.96□□□□□ -0.33
PCDH8-201ENST00000338862 CDC40O60508 579 aaKnown RBP eCLIP12.96□□□□□ -0.34
PCDH8-201ENST00000338862 HLA-DQB1P01920 261 aa12.96□□□□□ -0.34
PCDH8-201ENST00000338862 POU3F4P49335 361 aa12.96□□□□□ -0.34
PCDH8-201ENST00000338862 RPS15AP62244 130 aaKnown RBP12.96□□□□□ -0.34
PCDH8-201ENST00000338862 ILF3Q12906 894 aaKnown RBP eCLIP12.96□□□□□ -0.34
PCDH8-201ENST00000338862 ALG10Q5BKT4 473 aa12.96□□□□□ -0.34
PCDH8-201ENST00000338862 SLC25A30Q5SVS4 291 aa12.96□□□□□ -0.34
PCDH8-201ENST00000338862 LILRA6Q6PI73 481 aa12.96□□□□□ -0.34
PCDH8-201ENST00000338862 OR6V1Q8N148 313 aa12.96□□□□□ -0.34
PCDH8-201ENST00000338862 MFSD9Q8NBP5 474 aa12.96□□□□□ -0.34
PCDH8-201ENST00000338862 PAQR8Q8TEZ7 354 aa12.96□□□□□ -0.34
PCDH8-201ENST00000338862 ZNF707Q96C28 371 aaPredicted RBP12.96□□□□□ -0.34
PCDH8-201ENST00000338862 MRPS18AQ9NVS2 196 aaKnown RBP12.96□□□□□ -0.34
PCDH8-201ENST00000338862 CKLFQ9UBR5 152 aa12.96□□□□□ -0.34
PCDH8-201ENST00000338862 HELZP42694 1942 aaKnown RBP12.95□□□□□ -0.34
PCDH8-201ENST00000338862 GABARAPH6UMI1 98 aa12.95□□□□□ -0.34
PCDH8-201ENST00000338862 CYB5AP00167 134 aa12.95□□□□□ -0.34
PCDH8-201ENST00000338862 ITGA3P26006 1051 aa12.95□□□□□ -0.34
PCDH8-201ENST00000338862 ARFIP1P53367 373 aa12.95□□□□□ -0.34
PCDH8-201ENST00000338862 PPP1CAP62136 330 aa12.95□□□□□ -0.34
PCDH8-201ENST00000338862 OR7A5Q15622 319 aa12.95□□□□□ -0.34
PCDH8-201ENST00000338862 DCAF12L2Q5VW00 463 aa12.95□□□□□ -0.34
PCDH8-201ENST00000338862 RPL13AP3Q6NVV1 102 aa12.95□□□□□ -0.34
PCDH8-201ENST00000338862 POMGNT2Q8NAT1 580 aa12.95□□□□□ -0.34
PCDH8-201ENST00000338862 SOSTQ9BQB4 213 aa12.95□□□□□ -0.34
PCDH8-201ENST00000338862 FLRT3Q9NZU0 649 aa12.95□□□□□ -0.34
PCDH8-201ENST00000338862 ZNF230Q9UIE0 474 aaPredicted RBP12.95□□□□□ -0.34
PCDH8-201ENST00000338862 SHOXO15266 292 aa12.95□□□□□ -0.34
PCDH8-201ENST00000338862 CISD3P0C7P0 127 aa12.95□□□□□ -0.34
PCDH8-201ENST00000338862 ARHGAP11BQ3KRB8 267 aa12.95□□□□□ -0.34
PCDH8-201ENST00000338862 DMKNQ6E0U4 476 aaPredicted RBP12.95□□□□□ -0.34
PCDH8-201ENST00000338862 MUC20Q8N307 709 aaPredicted RBP12.95□□□□□ -0.34
PCDH8-201ENST00000338862 OR4C3Q8NH37 302 aa12.95□□□□□ -0.34
PCDH8-201ENST00000338862 HAVCR2Q8TDQ0 301 aa12.95□□□□□ -0.34
PCDH8-201ENST00000338862 METTL21AQ8WXB1 218 aa12.95□□□□□ -0.34
PCDH8-201ENST00000338862 FAM3CQ92520 227 aa12.95□□□□□ -0.34
PCDH8-201ENST00000338862 PGLYRP3Q96LB9 341 aa12.95□□□□□ -0.34
PCDH8-201ENST00000338862 LINC00615Q96LM1 132 aaPredicted RBP12.95□□□□□ -0.34
PCDH8-201ENST00000338862 IFT46Q9NQC8 304 aa12.95□□□□□ -0.34
PCDH8-201ENST00000338862 GPR160Q9UJ42 338 aa12.95□□□□□ -0.34
PCDH8-201ENST00000338862 GPR75O95800 540 aa12.95□□□□□ -0.34
PCDH8-201ENST00000338862 CAPZA2P47755 286 aa12.95□□□□□ -0.34
PCDH8-201ENST00000338862 LSSP48449 732 aa12.95□□□□□ -0.34
PCDH8-201ENST00000338862 NANOS3P60323 173 aaKnown RBP12.95□□□□□ -0.34
PCDH8-201ENST00000338862 DPTQ07507 201 aa12.95□□□□□ -0.34
PCDH8-201ENST00000338862 SEZ6L2Q6UXD5 910 aa12.95□□□□□ -0.34
PCDH8-201ENST00000338862 STAC2Q6ZMT1 411 aa12.95□□□□□ -0.34
PCDH8-201ENST00000338862 BMPERQ8N8U9 685 aa12.95□□□□□ -0.34
PCDH8-201ENST00000338862 INO80EQ8NBZ0 244 aaPredicted RBP12.95□□□□□ -0.34
PCDH8-201ENST00000338862 DGAT2Q96PD7 388 aa12.95□□□□□ -0.34
PCDH8-201ENST00000338862 ZNF350Q9GZX5 532 aa12.95□□□□□ -0.34
PCDH8-201ENST00000338862 ACTR10Q9NZ32 417 aa12.95□□□□□ -0.34
PCDH8-201ENST00000338862 TDRD6O60522 2096 aaKnown RBP12.95□□□□□ -0.34
PCDH8-201ENST00000338862 TSPAN11A1L157 253 aa12.94□□□□□ -0.34
PCDH8-201ENST00000338862 CARNS1A5YM72 827 aa12.94□□□□□ -0.34
PCDH8-201ENST00000338862 MCRIP1C9JLW8 97 aa12.94□□□□□ -0.34
PCDH8-201ENST00000338862 CEACAM5P06731 702 aa12.94□□□□□ -0.34
PCDH8-201ENST00000338862 CEBPGP53567 150 aa12.94□□□□□ -0.34
PCDH8-201ENST00000338862 POU4F2Q12837 409 aa12.94□□□□□ -0.34
PCDH8-201ENST00000338862 DUSP8Q13202 625 aa12.94□□□□□ -0.34
PCDH8-201ENST00000338862 KLF9Q13886 244 aaPredicted RBP12.94□□□□□ -0.34
PCDH8-201ENST00000338862 C2orf68Q2NKX9 166 aa12.94□□□□□ -0.34
PCDH8-201ENST00000338862 STEAP2Q8NFT2 490 aa12.94□□□□□ -0.34
PCDH8-201ENST00000338862 OR4S1Q8NGB4 309 aa12.94□□□□□ -0.34
PCDH8-201ENST00000338862 ZFYVE21Q9BQ24 234 aa12.94□□□□□ -0.34
PCDH8-201ENST00000338862 SYNDIG1Q9H7V2 258 aa12.94□□□□□ -0.34
PCDH8-201ENST00000338862 C2orf42Q9NWW7 574 aa12.94□□□□□ -0.34
PCDH8-201ENST00000338862 SCN5AQ14524 2016 aa12.94□□□□□ -0.34
PCDH8-201ENST00000338862 FADS1O60427 444 aa12.94□□□□□ -0.34
PCDH8-201ENST00000338862 PRAF2O60831 178 aa12.94□□□□□ -0.34
PCDH8-201ENST00000338862 RENP00797 406 aa12.94□□□□□ -0.34
PCDH8-201ENST00000338862 HLA-AP01891 365 aaKnown RBP12.94□□□□□ -0.34
PCDH8-201ENST00000338862 IFNGR1P15260 489 aa12.94□□□□□ -0.34
PCDH8-201ENST00000338862 UGT2B7P16662 529 aa12.94□□□□□ -0.34
PCDH8-201ENST00000338862 MAOAP21397 527 aa12.94□□□□□ -0.34
PCDH8-201ENST00000338862 GJA4P35212 333 aa12.94□□□□□ -0.34
PCDH8-201ENST00000338862 RPS21P63220 83 aaKnown RBP12.94□□□□□ -0.34
PCDH8-201ENST00000338862 GPR18Q14330 331 aa12.94□□□□□ -0.34
PCDH8-201ENST00000338862 MFSD13AQ14CX5 517 aa12.94□□□□□ -0.34
PCDH8-201ENST00000338862 HLA-DQA1Q5Y7H0 255 aa12.94□□□□□ -0.34
PCDH8-201ENST00000338862 FAM180AQ6UWF9 173 aa12.94□□□□□ -0.34
PCDH8-201ENST00000338862 OR1E3Q8WZA6 343 aa12.94□□□□□ -0.34
PCDH8-201ENST00000338862 RADILQ96JH8 1075 aa12.94□□□□□ -0.34
PCDH8-201ENST00000338862 ADOQ96SZ5 270 aa12.94□□□□□ -0.34
PCDH8-201ENST00000338862 POFUT1Q9H488 388 aa12.94□□□□□ -0.34
PCDH8-201ENST00000338862 WDR76Q9H967 626 aa12.94□□□□□ -0.34
PCDH8-201ENST00000338862 ELOVL3Q9HB03 270 aa12.94□□□□□ -0.34
PCDH8-201ENST00000338862 SOX1O00570 391 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms