RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 LYRM1O43325 122 aa11.37□□□□□ -0.59
FN1-202ENST00000336916 ALOX12BO75342 701 aa11.37□□□□□ -0.59
FN1-202ENST00000336916 ZNF266Q14584 549 aa11.37□□□□□ -0.59
FN1-202ENST00000336916 MBTPS1Q14703 1052 aa11.37□□□□□ -0.59
FN1-202ENST00000336916 PRAMEF9Q5VWM5 478 aa11.37□□□□□ -0.59
FN1-202ENST00000336916 CCBE1Q6UXH8 406 aaPredicted RBP11.37□□□□□ -0.59
FN1-202ENST00000336916 CBLL1Q75N03 491 aa11.37□□□□□ -0.59
FN1-202ENST00000336916 SIMC1Q8NDZ2 872 aa11.37□□□□□ -0.59
FN1-202ENST00000336916 ST8SIA1Q92185 356 aa11.37□□□□□ -0.59
FN1-202ENST00000336916 CR2P20023 1033 aa11.37□□□□□ -0.59
FN1-202ENST00000336916 POU3F3P20264 500 aaPredicted RBP11.37□□□□□ -0.59
FN1-202ENST00000336916 TPMTP51580 245 aa11.37□□□□□ -0.59
FN1-202ENST00000336916 PIANPQ8IYJ0 282 aa11.37□□□□□ -0.59
FN1-202ENST00000336916 ZNF778Q96MU6 729 aa11.37□□□□□ -0.59
FN1-202ENST00000336916 TP63Q9H3D4 680 aaPredicted RBP11.37□□□□□ -0.59
FN1-202ENST00000336916 RHBDD3Q9Y3P4 386 aa11.37□□□□□ -0.59
FN1-202ENST00000336916 PHF3Q92576 2039 aaKnown RBP11.36□□□□□ -0.59
FN1-202ENST00000336916 KIR2DS1A0A191URI9 304 aa11.36□□□□□ -0.59
FN1-202ENST00000336916 HLA-AP01891 365 aaKnown RBP11.36□□□□□ -0.59
FN1-202ENST00000336916 SERPINA2P20848 420 aa11.36□□□□□ -0.59
FN1-202ENST00000336916 KIR2DS4P43632 304 aa11.36□□□□□ -0.59
FN1-202ENST00000336916 SSTP61278 116 aa11.36□□□□□ -0.59
FN1-202ENST00000336916 FAM53BQ14153 422 aa11.36□□□□□ -0.59
FN1-202ENST00000336916 KIR2DS1Q14954 304 aa11.36□□□□□ -0.59
FN1-202ENST00000336916 RBMXL3Q8N7X1 1067 aaKnown RBP11.36□□□□□ -0.59
FN1-202ENST00000336916 THAP7Q9BT49 309 aaPredicted RBP11.36□□□□□ -0.59
FN1-202ENST00000336916 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.36□□□□□ -0.59
FN1-202ENST00000336916 F11P03951 625 aa11.36□□□□□ -0.59
FN1-202ENST00000336916 TACR1P25103 407 aa11.36□□□□□ -0.59
FN1-202ENST00000336916 GABREP78334 506 aa11.36□□□□□ -0.59
FN1-202ENST00000336916 TMEFF1Q8IYR6 380 aa11.36□□□□□ -0.59
FN1-202ENST00000336916 TMEM151AQ8N4L1 468 aa11.36□□□□□ -0.59
FN1-202ENST00000336916 LMNTD1Q8N9Z9 388 aa11.36□□□□□ -0.59
FN1-202ENST00000336916 SLC22A12Q96S37 553 aa11.36□□□□□ -0.59
FN1-202ENST00000336916 ZCCHC4Q9H5U6 513 aa11.36□□□□□ -0.59
FN1-202ENST00000336916 SLC5A10A0PJK1 596 aa11.36□□□□□ -0.59
FN1-202ENST00000336916 ZBTB42B2RXF5 422 aa11.36□□□□□ -0.59
FN1-202ENST00000336916 SULT1B1O43704 296 aa11.36□□□□□ -0.59
FN1-202ENST00000336916 ILKQ13418 452 aa11.36□□□□□ -0.59
FN1-202ENST00000336916 TPBGQ13641 420 aa11.36□□□□□ -0.59
FN1-202ENST00000336916 UBE2ZQ9H832 354 aaPredicted RBP11.36□□□□□ -0.59
FN1-202ENST00000336916 SLC22A11Q9NSA0 550 aa11.36□□□□□ -0.59
FN1-202ENST00000336916 C5AR2Q9P296 337 aa11.36□□□□□ -0.59
FN1-202ENST00000336916 RAB22AQ9UL26 194 aa11.36□□□□□ -0.59
FN1-202ENST00000336916 ZNF346Q9UL40 294 aaKnown RBP11.36□□□□□ -0.59
FN1-202ENST00000336916 HCRTR1O43613 425 aa11.36□□□□□ -0.59
FN1-202ENST00000336916 CLN5O75503 358 aa11.36□□□□□ -0.59
FN1-202ENST00000336916 GLAP06280 429 aa11.36□□□□□ -0.59
FN1-202ENST00000336916 MFAP5Q13361 173 aa11.36□□□□□ -0.59
FN1-202ENST00000336916 CFAP77Q6ZQR2 320 aa11.36□□□□□ -0.59
FN1-202ENST00000336916 NDUFAF7Q7L592 441 aa11.36□□□□□ -0.59
FN1-202ENST00000336916 GCNT2Q8N0V5 402 aa11.36□□□□□ -0.59
FN1-202ENST00000336916 CARFQ8N187 725 aa11.36□□□□□ -0.59
FN1-202ENST00000336916 LRRC18Q8N456 261 aa11.36□□□□□ -0.59
FN1-202ENST00000336916 L3MBTL4Q8NA19 623 aa11.36□□□□□ -0.59
FN1-202ENST00000336916 ABHD6Q9BV23 337 aa11.36□□□□□ -0.59
FN1-202ENST00000336916 KATNB1Q9BVA0 655 aa11.36□□□□□ -0.59
FN1-202ENST00000336916 MS4A8Q9BY19 250 aa11.36□□□□□ -0.59
FN1-202ENST00000336916 PTPRFP10586 1907 aa11.36□□□□□ -0.59
FN1-202ENST00000336916 KDM4EB2RXH2 506 aaPredicted RBP11.36□□□□□ -0.59
FN1-202ENST00000336916 HTR1FP30939 366 aa11.36□□□□□ -0.59
FN1-202ENST00000336916 ATPAF1Q5TC12 328 aaPredicted RBP11.36□□□□□ -0.59
FN1-202ENST00000336916 UBE2UQ5VVX9 321 aa11.36□□□□□ -0.59
FN1-202ENST00000336916 NXNL2Q5VZ03 156 aa11.36□□□□□ -0.59
FN1-202ENST00000336916 H1FNTQ75WM6 255 aaPredicted RBP11.36□□□□□ -0.59
FN1-202ENST00000336916 ATOH8Q96SQ7 321 aa11.36□□□□□ -0.59
FN1-202ENST00000336916 TCEAL2Q9H3H9 227 aaPredicted RBP11.36□□□□□ -0.59
FN1-202ENST00000336916 CHRNA9Q9UGM1 479 aa11.36□□□□□ -0.59
FN1-202ENST00000336916 MMP17Q9ULZ9 603 aa11.36□□□□□ -0.59
FN1-202ENST00000336916 SSUH2Q9Y2M2 353 aa11.36□□□□□ -0.59
FN1-202ENST00000336916 ZNF254O75437 659 aa11.36□□□□□ -0.59
FN1-202ENST00000336916 PAPD4Q6PIY7 484 aaKnown RBP11.36□□□□□ -0.59
FN1-202ENST00000336916 USP51Q70EK9 711 aa11.36□□□□□ -0.59
FN1-202ENST00000336916 SPPL3Q8TCT6 385 aa11.36□□□□□ -0.59
FN1-202ENST00000336916 ST7LQ8TDW4 575 aa11.36□□□□□ -0.59
FN1-202ENST00000336916 ATF6BQ99941 703 aa11.36□□□□□ -0.59
FN1-202ENST00000336916 AK6Q9Y3D8 172 aaKnown RBP11.36□□□□□ -0.59
FN1-202ENST00000336916 NUDT21O43809 227 aaKnown RBP11.35□□□□□ -0.59
FN1-202ENST00000336916 CD79BP40259 229 aa11.35□□□□□ -0.59
FN1-202ENST00000336916 NFATC3Q12968 1075 aa11.35□□□□□ -0.59
FN1-202ENST00000336916 SLC10A1Q14973 349 aa11.35□□□□□ -0.59
FN1-202ENST00000336916 AFMIDQ63HM1 303 aa11.35□□□□□ -0.59
FN1-202ENST00000336916 SUMF2Q8NBJ7 301 aa11.35□□□□□ -0.59
FN1-202ENST00000336916 ZNF419Q96HQ0 510 aaPredicted RBP11.35□□□□□ -0.59
FN1-202ENST00000336916 DCLRE1CQ96SD1 692 aaKnown RBP11.35□□□□□ -0.59
FN1-202ENST00000336916 RAD52P43351 418 aa11.35□□□□□ -0.59
FN1-202ENST00000336916 HOXA1P49639 335 aaPredicted RBP11.35□□□□□ -0.59
FN1-202ENST00000336916 CSNK1EP49674 416 aaKnown RBP11.35□□□□□ -0.59
FN1-202ENST00000336916 ERVFC1P60507 584 aa11.35□□□□□ -0.59
FN1-202ENST00000336916 SIX1Q15475 284 aaPredicted RBP11.35□□□□□ -0.59
FN1-202ENST00000336916 FAM57BQ71RH2 274 aa11.35□□□□□ -0.59
FN1-202ENST00000336916 SDR9C7Q8NEX9 313 aa11.35□□□□□ -0.59
FN1-202ENST00000336916 OR7G2Q8NG99 324 aa11.35□□□□□ -0.59
FN1-202ENST00000336916 RIMS4Q9H426 269 aaPredicted RBP11.35□□□□□ -0.59
FN1-202ENST00000336916 USP22Q9UPT9 525 aa11.35□□□□□ -0.59
FN1-202ENST00000336916 KLK4Q9Y5K2 254 aa11.35□□□□□ -0.59
FN1-202ENST00000336916 MEIS3P2A8K0S8 358 aa11.35□□□□□ -0.59
FN1-202ENST00000336916 RFPL3O75679 317 aa11.35□□□□□ -0.59
FN1-202ENST00000336916 IL2RAP01589 272 aa11.35□□□□□ -0.59
FN1-202ENST00000336916 RAF1P04049 648 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms