RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 KLK2P20151 261 aa11.4□□□□□ -0.58
LIMK1-201ENST00000336180 IL18Q14116 193 aa11.4□□□□□ -0.58
LIMK1-201ENST00000336180 OR6V1Q8N148 313 aa11.4□□□□□ -0.58
LIMK1-201ENST00000336180 ZNF433Q8N7K0 673 aaPredicted RBP11.4□□□□□ -0.58
LIMK1-201ENST00000336180 ABHD4Q8TB40 342 aa11.4□□□□□ -0.58
LIMK1-201ENST00000336180 THEM6Q8WUY1 208 aa11.4□□□□□ -0.58
LIMK1-201ENST00000336180 GCDHQ92947 438 aaPredicted RBP11.4□□□□□ -0.58
LIMK1-201ENST00000336180 MVB12AQ96EY5 273 aa11.4□□□□□ -0.58
LIMK1-201ENST00000336180 ARRDC1-AS1Q9H2J1 176 aa11.4□□□□□ -0.58
LIMK1-201ENST00000336180 C12orf10Q9HB07 376 aa11.4□□□□□ -0.58
LIMK1-201ENST00000336180 NRIP3Q9NQ35 241 aa11.4□□□□□ -0.58
LIMK1-201ENST00000336180 TMED7Q9Y3B3 224 aa11.4□□□□□ -0.58
LIMK1-201ENST00000336180 PTGS2P35354 604 aa11.4□□□□□ -0.58
LIMK1-201ENST00000336180 ACSM3Q53FZ2 586 aa11.4□□□□□ -0.58
LIMK1-201ENST00000336180 NIPAL1Q6NVV3 410 aa11.4□□□□□ -0.58
LIMK1-201ENST00000336180 OR4D9Q8NGE8 314 aa11.4□□□□□ -0.58
LIMK1-201ENST00000336180 OR52N1Q8NH53 320 aa11.4□□□□□ -0.58
LIMK1-201ENST00000336180 CAPSLQ8WWF8 208 aa11.4□□□□□ -0.58
LIMK1-201ENST00000336180 JSRP1Q96MG2 331 aaPredicted RBP11.4□□□□□ -0.58
LIMK1-201ENST00000336180 ZNF578Q96N58 590 aaPredicted RBP11.4□□□□□ -0.58
LIMK1-201ENST00000336180 RBM14Q96PK6 669 aaKnown RBP11.4□□□□□ -0.58
LIMK1-201ENST00000336180 PFDN2Q9UHV9 154 aa11.4□□□□□ -0.58
LIMK1-201ENST00000336180 TBC1D24Q9ULP9 559 aa11.4□□□□□ -0.58
LIMK1-201ENST00000336180 CNOT1A5YKK6 2376 aaKnown RBP11.4□□□□□ -0.58
LIMK1-201ENST00000336180 TRBV2A0A0J9YWF9 115 aa11.39□□□□□ -0.59
LIMK1-201ENST00000336180 ACY1Q03154 408 aa11.39□□□□□ -0.59
LIMK1-201ENST00000336180 FMODQ06828 376 aa11.39□□□□□ -0.59
LIMK1-201ENST00000336180 KRR1Q13601 381 aaKnown RBP11.39□□□□□ -0.59
LIMK1-201ENST00000336180 C21orf62-AS1Q17RA5 79 aa11.39□□□□□ -0.59
LIMK1-201ENST00000336180 ELMOD2Q8IZ81 293 aa11.39□□□□□ -0.59
LIMK1-201ENST00000336180 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.39□□□□□ -0.59
LIMK1-201ENST00000336180 FAM71CQ8NEG0 241 aa11.39□□□□□ -0.59
LIMK1-201ENST00000336180 ZNF417Q8TAU3 575 aa11.39□□□□□ -0.59
LIMK1-201ENST00000336180 ZNF587Q96SQ5 575 aaPredicted RBP11.39□□□□□ -0.59
LIMK1-201ENST00000336180 BRD7Q9NPI1 651 aa11.39□□□□□ -0.59
LIMK1-201ENST00000336180 RXFP3Q9NSD7 469 aa11.39□□□□□ -0.59
LIMK1-201ENST00000336180 MED29Q9NX70 200 aa11.39□□□□□ -0.59
LIMK1-201ENST00000336180 NCDNQ9UBB6 729 aa11.39□□□□□ -0.59
LIMK1-201ENST00000336180 RASD1Q9Y272 281 aa11.39□□□□□ -0.59
LIMK1-201ENST00000336180 B3GNT3Q9Y2A9 372 aa11.39□□□□□ -0.59
LIMK1-201ENST00000336180 FAM186AA6NE01 2351 aa11.39□□□□□ -0.59
LIMK1-201ENST00000336180 IRGMA1A4Y4 181 aa11.39□□□□□ -0.59
LIMK1-201ENST00000336180 AKR7A3O95154 331 aa11.39□□□□□ -0.59
LIMK1-201ENST00000336180 WNT11O96014 354 aa11.39□□□□□ -0.59
LIMK1-201ENST00000336180 NANOS3P60323 173 aaKnown RBP11.39□□□□□ -0.59
LIMK1-201ENST00000336180 BIKQ13323 160 aa11.39□□□□□ -0.59
LIMK1-201ENST00000336180 OR7A5Q15622 319 aa11.39□□□□□ -0.59
LIMK1-201ENST00000336180 RPL13AP3Q6NVV1 102 aa11.39□□□□□ -0.59
LIMK1-201ENST00000336180 DPY19L2P2Q6ZN68 376 aa11.39□□□□□ -0.59
LIMK1-201ENST00000336180 ADGRG3Q86Y34 549 aa11.39□□□□□ -0.59
LIMK1-201ENST00000336180 ADAD1Q96M93 576 aaKnown RBP11.39□□□□□ -0.59
LIMK1-201ENST00000336180 SPSB2Q99619 263 aa11.39□□□□□ -0.59
LIMK1-201ENST00000336180 ATF6BQ99941 703 aa11.39□□□□□ -0.59
LIMK1-201ENST00000336180 WDR77Q9BQA1 342 aaPredicted RBP11.39□□□□□ -0.59
LIMK1-201ENST00000336180 DUSP23Q9BVJ7 150 aa11.39□□□□□ -0.59
LIMK1-201ENST00000336180 TAS2R10Q9NYW0 307 aa11.39□□□□□ -0.59
LIMK1-201ENST00000336180 PTRH2Q9Y3E5 179 aaKnown RBP11.39□□□□□ -0.59
LIMK1-201ENST00000336180 BOD1L1Q8NFC6 3051 aa11.39□□□□□ -0.59
LIMK1-201ENST00000336180 TRDV1A0A1B0GX56 115 aa11.39□□□□□ -0.59
LIMK1-201ENST00000336180 A0A1W2PNR3 127 aa11.39□□□□□ -0.59
LIMK1-201ENST00000336180 TMEM200CA6NKL6 621 aa11.39□□□□□ -0.59
LIMK1-201ENST00000336180 PRSS47A8MTI9 375 aa11.39□□□□□ -0.59
LIMK1-201ENST00000336180 RGS9O75916 674 aaPredicted RBP11.39□□□□□ -0.59
LIMK1-201ENST00000336180 IL1AP01583 271 aa11.39□□□□□ -0.59
LIMK1-201ENST00000336180 FREM3P0C091 2139 aa11.39□□□□□ -0.59
LIMK1-201ENST00000336180 IL7P13232 177 aa11.39□□□□□ -0.59
LIMK1-201ENST00000336180 SNRPBP14678 240 aaKnown RBP11.39□□□□□ -0.59
LIMK1-201ENST00000336180 SFTPDP35247 375 aa11.39□□□□□ -0.59
LIMK1-201ENST00000336180 EIF1AXP47813 144 aaKnown RBP11.39□□□□□ -0.59
LIMK1-201ENST00000336180 GDI2P50395 445 aaKnown RBP11.39□□□□□ -0.59
LIMK1-201ENST00000336180 ARMC4Q5T2S8 1044 aa11.39□□□□□ -0.59
LIMK1-201ENST00000336180 PXDC1Q5TGL8 231 aa11.39□□□□□ -0.59
LIMK1-201ENST00000336180 ASB18Q6ZVZ8 466 aa11.39□□□□□ -0.59
LIMK1-201ENST00000336180 DNAAF1Q8NEP3 725 aa11.39□□□□□ -0.59
LIMK1-201ENST00000336180 OR10AC1Q8NH08 325 aa11.39□□□□□ -0.59
LIMK1-201ENST00000336180 GAL3ST1Q99999 423 aa11.39□□□□□ -0.59
LIMK1-201ENST00000336180 DHRS9Q9BPW9 319 aa11.39□□□□□ -0.59
LIMK1-201ENST00000336180 BEX2Q9BXY8 128 aa11.39□□□□□ -0.59
LIMK1-201ENST00000336180 R4GN57 208 aa11.39□□□□□ -0.59
LIMK1-201ENST00000336180 BLACEA4D250 179 aa11.38□□□□□ -0.59
LIMK1-201ENST00000336180 CD14P08571 375 aa11.38□□□□□ -0.59
LIMK1-201ENST00000336180 PRKCAP17252 672 aa11.38□□□□□ -0.59
LIMK1-201ENST00000336180 TPTEP56180 551 aa11.38□□□□□ -0.59
LIMK1-201ENST00000336180 POLR2GP62487 172 aaKnown RBP eCLIP11.38□□□□□ -0.59
LIMK1-201ENST00000336180 DDI2Q5TDH0 399 aa11.38□□□□□ -0.59
LIMK1-201ENST00000336180 GLRX5Q86SX6 157 aa11.38□□□□□ -0.59
LIMK1-201ENST00000336180 SAMD12Q8N8I0 201 aa11.38□□□□□ -0.59
LIMK1-201ENST00000336180 OR5H6Q8NGV6 325 aa11.38□□□□□ -0.59
LIMK1-201ENST00000336180 TMCO6Q96DC7 493 aa11.38□□□□□ -0.59
LIMK1-201ENST00000336180 TAS2R5Q9NYW4 299 aa11.38□□□□□ -0.59
LIMK1-201ENST00000336180 MRTO4Q9UKD2 239 aaKnown RBP11.38□□□□□ -0.59
LIMK1-201ENST00000336180 POLHQ9Y253 713 aa11.38□□□□□ -0.59
LIMK1-201ENST00000336180 ZNF45Q02386 682 aa11.38□□□□□ -0.59
LIMK1-201ENST00000336180 FOXF1Q12946 379 aa11.38□□□□□ -0.59
LIMK1-201ENST00000336180 ACKR1Q16570 336 aa11.38□□□□□ -0.59
LIMK1-201ENST00000336180 RNLSQ5VYX0 342 aa11.38□□□□□ -0.59
LIMK1-201ENST00000336180 SERPINA12Q8IW75 414 aa11.38□□□□□ -0.59
LIMK1-201ENST00000336180 CMIPQ8IY22 773 aa11.38□□□□□ -0.59
LIMK1-201ENST00000336180 THAP4Q8WY91 577 aa11.38□□□□□ -0.59
LIMK1-201ENST00000336180 LAT2Q9GZY6 243 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms