RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 PLCXD1Q9NUJ7 323 aa10.83□□□□□ -0.68
HDAC6-201ENST00000334136 TRAV27A0A087WT01 109 aa10.82□□□□□ -0.68
HDAC6-201ENST00000334136 C1QBP02746 253 aa10.82□□□□□ -0.68
HDAC6-201ENST00000334136 KIR2DL3P43628 341 aa10.82□□□□□ -0.68
HDAC6-201ENST00000334136 ARHGDIBP52566 201 aa10.82□□□□□ -0.68
HDAC6-201ENST00000334136 NKPD1Q17RQ9 610 aa10.82□□□□□ -0.68
HDAC6-201ENST00000334136 ZNF385BQ569K4 471 aa10.82□□□□□ -0.68
HDAC6-201ENST00000334136 TMEM64Q6YI46 380 aa10.82□□□□□ -0.68
HDAC6-201ENST00000334136 MAML2Q8IZL2 1156 aaPredicted RBP10.82□□□□□ -0.68
HDAC6-201ENST00000334136 THAP4Q8WY91 577 aa10.82□□□□□ -0.68
HDAC6-201ENST00000334136 PMM1Q92871 262 aa10.82□□□□□ -0.68
HDAC6-201ENST00000334136 LCORQ96JN0 433 aaPredicted RBP10.82□□□□□ -0.68
HDAC6-201ENST00000334136 NRSN2Q9GZP1 204 aa10.82□□□□□ -0.68
HDAC6-201ENST00000334136 DIMT1Q9UNQ2 313 aaKnown RBP10.82□□□□□ -0.68
HDAC6-201ENST00000334136 MN1Q10571 1320 aaPredicted RBP10.82□□□□□ -0.68
HDAC6-201ENST00000334136 IGKV1-8A0A0C4DH67 115 aa10.82□□□□□ -0.68
HDAC6-201ENST00000334136 ARGFXA6NJG6 315 aa10.82□□□□□ -0.68
HDAC6-201ENST00000334136 ZNF780AO75290 641 aaPredicted RBP10.82□□□□□ -0.68
HDAC6-201ENST00000334136 ACP1P24666 158 aa10.82□□□□□ -0.68
HDAC6-201ENST00000334136 ASAH1Q13510 395 aa10.82□□□□□ -0.68
HDAC6-201ENST00000334136 PRTGQ2VWP7 1150 aa10.82□□□□□ -0.68
HDAC6-201ENST00000334136 ALG10BQ5I7T1 473 aa10.82□□□□□ -0.68
HDAC6-201ENST00000334136 SLX4IPQ5VYV7 408 aa10.82□□□□□ -0.68
HDAC6-201ENST00000334136 APOOLQ6UXV4 268 aa10.82□□□□□ -0.68
HDAC6-201ENST00000334136 PRSS45Q7RTY3 260 aa10.82□□□□□ -0.68
HDAC6-201ENST00000334136 NANOGP1Q8N7R0 232 aa10.82□□□□□ -0.68
HDAC6-201ENST00000334136 ZFAND1Q8TCF1 268 aa10.82□□□□□ -0.68
HDAC6-201ENST00000334136 KCNE4Q8WWG9 221 aa10.82□□□□□ -0.68
HDAC6-201ENST00000334136 ACOT11Q8WXI4 607 aaPredicted RBP10.82□□□□□ -0.68
HDAC6-201ENST00000334136 CNRIP1Q96F85 164 aaPredicted RBP10.82□□□□□ -0.68
HDAC6-201ENST00000334136 KATNB1Q9BVA0 655 aa10.82□□□□□ -0.68
HDAC6-201ENST00000334136 POLDIP3Q9BY77 421 aaKnown RBP10.82□□□□□ -0.68
HDAC6-201ENST00000334136 NOX3Q9HBY0 568 aa10.82□□□□□ -0.68
HDAC6-201ENST00000334136 LHX9Q9NQ69 397 aa10.82□□□□□ -0.68
HDAC6-201ENST00000334136 FKBP14Q9NWM8 211 aa10.82□□□□□ -0.68
HDAC6-201ENST00000334136 A0A1W2PPL8 197 aa10.82□□□□□ -0.68
HDAC6-201ENST00000334136 B4E171 279 aa10.82□□□□□ -0.68
HDAC6-201ENST00000334136 MAPK3P27361 379 aaPredicted RBP10.82□□□□□ -0.68
HDAC6-201ENST00000334136 TSPAN7P41732 249 aa10.82□□□□□ -0.68
HDAC6-201ENST00000334136 P2RX3P56373 397 aa10.82□□□□□ -0.68
HDAC6-201ENST00000334136 KIAA0040Q15053 153 aa10.82□□□□□ -0.68
HDAC6-201ENST00000334136 PGGHGQ32M88 737 aa10.82□□□□□ -0.68
HDAC6-201ENST00000334136 FAHD1Q6P587 224 aa10.82□□□□□ -0.68
HDAC6-201ENST00000334136 SIAH3Q8IW03 269 aa10.82□□□□□ -0.68
HDAC6-201ENST00000334136 IQCF2Q8IXL9 164 aa10.82□□□□□ -0.68
HDAC6-201ENST00000334136 NR4A3Q92570 626 aa10.82□□□□□ -0.68
HDAC6-201ENST00000334136 ZNF501Q96CX3 271 aaPredicted RBP10.82□□□□□ -0.68
HDAC6-201ENST00000334136 HS6ST2Q96MM7 605 aa10.82□□□□□ -0.68
HDAC6-201ENST00000334136 OR2M2Q96R28 347 aa10.82□□□□□ -0.68
HDAC6-201ENST00000334136 CDCA4Q9BXL8 241 aa10.82□□□□□ -0.68
HDAC6-201ENST00000334136 TRAPPC13A5PLN9 417 aa10.81□□□□□ -0.68
HDAC6-201ENST00000334136 ATP6V1G2-DDX39BF2Z307 99 aa10.81□□□□□ -0.68
HDAC6-201ENST00000334136 SCGB1D2O95969 90 aa10.81□□□□□ -0.68
HDAC6-201ENST00000334136 PGCP20142 388 aa10.81□□□□□ -0.68
HDAC6-201ENST00000334136 PRKXP51817 358 aa10.81□□□□□ -0.68
HDAC6-201ENST00000334136 MC2RQ01718 297 aa10.81□□□□□ -0.68
HDAC6-201ENST00000334136 OPCMLQ14982 345 aa10.81□□□□□ -0.68
HDAC6-201ENST00000334136 STOML3Q8TAV4 291 aa10.81□□□□□ -0.68
HDAC6-201ENST00000334136 THOC3Q96J01 351 aaKnown RBP10.81□□□□□ -0.68
HDAC6-201ENST00000334136 CNN2Q99439 309 aaKnown RBP10.81□□□□□ -0.68
HDAC6-201ENST00000334136 POTEKPQ9BYX7 375 aa10.81□□□□□ -0.68
HDAC6-201ENST00000334136 SRRQ9GZT4 340 aa10.81□□□□□ -0.68
HDAC6-201ENST00000334136 GRHPRQ9UBQ7 328 aa10.81□□□□□ -0.68
HDAC6-201ENST00000334136 POLHQ9Y253 713 aa10.81□□□□□ -0.68
HDAC6-201ENST00000334136 SVILO95425 2214 aa10.81□□□□□ -0.68
HDAC6-201ENST00000334136 AMY2AP04746 511 aa10.81□□□□□ -0.68
HDAC6-201ENST00000334136 AQP2P41181 271 aa10.81□□□□□ -0.68
HDAC6-201ENST00000334136 VEGFCP49767 419 aa10.81□□□□□ -0.68
HDAC6-201ENST00000334136 CSRP3P50461 194 aa10.81□□□□□ -0.68
HDAC6-201ENST00000334136 ENTPD8Q5MY95 495 aa10.81□□□□□ -0.68
HDAC6-201ENST00000334136 SYT9Q86SS6 491 aa10.81□□□□□ -0.68
HDAC6-201ENST00000334136 C10orf111Q8N326 155 aa10.81□□□□□ -0.68
HDAC6-201ENST00000334136 SLC16A11Q8NCK7 471 aa10.81□□□□□ -0.68
HDAC6-201ENST00000334136 TMEM185AQ8NFB2 350 aa10.81□□□□□ -0.68
HDAC6-201ENST00000334136 SLC2A12Q8TD20 617 aa10.81□□□□□ -0.68
HDAC6-201ENST00000334136 GABARAPL3Q9BY60 117 aa10.81□□□□□ -0.68
HDAC6-201ENST00000334136 ZNF436Q9C0F3 470 aaPredicted RBP10.81□□□□□ -0.68
HDAC6-201ENST00000334136 METTL21EPA6NDL7 271 aa10.81□□□□□ -0.68
HDAC6-201ENST00000334136 ACOD1A6NK06 481 aa10.81□□□□□ -0.68
HDAC6-201ENST00000334136 CDC40O60508 579 aaKnown RBP eCLIP10.81□□□□□ -0.68
HDAC6-201ENST00000334136 TP53P04637 393 aaPredicted RBP10.81□□□□□ -0.68
HDAC6-201ENST00000334136 SPARCP09486 303 aa10.81□□□□□ -0.68
HDAC6-201ENST00000334136 CEACAM1P13688 526 aa10.81□□□□□ -0.68
HDAC6-201ENST00000334136 SSR4P51571 173 aa10.81□□□□□ -0.68
HDAC6-201ENST00000334136 GPR176Q14439 515 aa10.81□□□□□ -0.68
HDAC6-201ENST00000334136 FCRLAQ7L513 359 aa10.81□□□□□ -0.68
HDAC6-201ENST00000334136 CCDC190Q86UF4 302 aa10.81□□□□□ -0.68
HDAC6-201ENST00000334136 ZNF619Q8N2I2 560 aa10.81□□□□□ -0.68
HDAC6-201ENST00000334136 SIRT6Q8N6T7 355 aa10.81□□□□□ -0.68
HDAC6-201ENST00000334136 GHSRQ92847 366 aa10.81□□□□□ -0.68
HDAC6-201ENST00000334136 NEURL3Q96EH8 262 aa10.81□□□□□ -0.68
HDAC6-201ENST00000334136 UTP23Q9BRU9 249 aaKnown RBP10.81□□□□□ -0.68
HDAC6-201ENST00000334136 VN1R1Q9GZP7 353 aa10.81□□□□□ -0.68
HDAC6-201ENST00000334136 C19orf53Q9UNZ5 99 aaPredicted RBP10.81□□□□□ -0.68
HDAC6-201ENST00000334136 SERTM1A2A2V5 107 aa10.8□□□□□ -0.68
HDAC6-201ENST00000334136 PRICKLE3O43900 615 aaPredicted RBP10.8□□□□□ -0.68
HDAC6-201ENST00000334136 ZXDCQ2QGD7 858 aaPredicted RBP10.8□□□□□ -0.68
HDAC6-201ENST00000334136 MFSD12Q6NUT3 480 aa10.8□□□□□ -0.68
HDAC6-201ENST00000334136 TMPRSS9Q7Z410 1059 aa10.8□□□□□ -0.68
HDAC6-201ENST00000334136 TMEM239Q8WW34 195 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms