RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 ACOT11Q8WXI4 607 aaPredicted RBP12.32□□□□□ -0.44
LIMS1-201ENST00000332345 POP5Q969H6 163 aaKnown RBP12.32□□□□□ -0.44
LIMS1-201ENST00000332345 BPIFA2Q96DR5 249 aa12.32□□□□□ -0.44
LIMS1-201ENST00000332345 BOD1Q96IK1 185 aa12.32□□□□□ -0.44
LIMS1-201ENST00000332345 TXNDC15Q96J42 360 aa12.32□□□□□ -0.44
LIMS1-201ENST00000332345 ADAD1Q96M93 576 aaKnown RBP12.32□□□□□ -0.44
LIMS1-201ENST00000332345 OR2M2Q96R28 347 aa12.32□□□□□ -0.44
LIMS1-201ENST00000332345 EMC6Q9BV81 110 aa12.32□□□□□ -0.44
LIMS1-201ENST00000332345 MUC13Q9H3R2 512 aa12.32□□□□□ -0.44
LIMS1-201ENST00000332345 PLEKHF2Q9H8W4 249 aa12.32□□□□□ -0.44
LIMS1-201ENST00000332345 B3GAT2Q9NPZ5 323 aa12.32□□□□□ -0.44
LIMS1-201ENST00000332345 C20orf141Q9NUB4 165 aa12.32□□□□□ -0.44
LIMS1-201ENST00000332345 HEATR1Q9H583 2144 aaKnown RBP12.32□□□□□ -0.44
LIMS1-201ENST00000332345 ANKRD17O75179 2603 aaKnown RBP12.32□□□□□ -0.44
LIMS1-201ENST00000332345 POLQO75417 2590 aa12.31□□□□□ -0.44
LIMS1-201ENST00000332345 PDZD2O15018 2839 aa12.31□□□□□ -0.44
LIMS1-201ENST00000332345 A0A1W2PRG6 482 aa12.31□□□□□ -0.44
LIMS1-201ENST00000332345 A0A1W2PRQ8 180 aa12.31□□□□□ -0.44
LIMS1-201ENST00000332345 RPL36A-HNRNPH2H7BZ11 118 aa12.31□□□□□ -0.44
LIMS1-201ENST00000332345 SERPINI2O75830 405 aa12.31□□□□□ -0.44
LIMS1-201ENST00000332345 PRSS23O95084 383 aa12.31□□□□□ -0.44
LIMS1-201ENST00000332345 STAMBPO95630 424 aa12.31□□□□□ -0.44
LIMS1-201ENST00000332345 H1F0P07305 194 aaKnown RBP12.31□□□□□ -0.44
LIMS1-201ENST00000332345 HOXB1P14653 301 aaPredicted RBP12.31□□□□□ -0.44
LIMS1-201ENST00000332345 IFNGR1P15260 489 aa12.31□□□□□ -0.44
LIMS1-201ENST00000332345 PAX7P23759 505 aa12.31□□□□□ -0.44
LIMS1-201ENST00000332345 DNASE1P24855 282 aa12.31□□□□□ -0.44
LIMS1-201ENST00000332345 SH3BGRP55822 239 aaPredicted RBP12.31□□□□□ -0.44
LIMS1-201ENST00000332345 ROR2Q01974 943 aaKnown RBP12.31□□□□□ -0.44
LIMS1-201ENST00000332345 PRKCDQ05655 676 aa12.31□□□□□ -0.44
LIMS1-201ENST00000332345 DGCR6Q14129 220 aa12.31□□□□□ -0.44
LIMS1-201ENST00000332345 TRIM25Q14258 630 aaKnown RBP12.31□□□□□ -0.44
LIMS1-201ENST00000332345 MTX3Q5HYI7 312 aa12.31□□□□□ -0.44
LIMS1-201ENST00000332345 KLHL17Q6TDP4 642 aa12.31□□□□□ -0.44
LIMS1-201ENST00000332345 MBOAT2Q6ZWT7 520 aa12.31□□□□□ -0.44
LIMS1-201ENST00000332345 SLC35D2Q76EJ3 337 aa12.31□□□□□ -0.44
LIMS1-201ENST00000332345 TSEN54Q7Z6J9 526 aaKnown RBP12.31□□□□□ -0.44
LIMS1-201ENST00000332345 C20orf196Q8IYI0 205 aa12.31□□□□□ -0.44
LIMS1-201ENST00000332345 TMEM123Q8N131 208 aa12.31□□□□□ -0.44
LIMS1-201ENST00000332345 OR6N1Q8NGY5 312 aa12.31□□□□□ -0.44
LIMS1-201ENST00000332345 OR52N5Q8NH56 324 aa12.31□□□□□ -0.44
LIMS1-201ENST00000332345 OR6X1Q8NH79 312 aa12.31□□□□□ -0.44
LIMS1-201ENST00000332345 NINJ1Q92982 152 aa12.31□□□□□ -0.44
LIMS1-201ENST00000332345 SLC17A5Q9NRA2 495 aa12.31□□□□□ -0.44
LIMS1-201ENST00000332345 MAN2C1Q9NTJ4 1040 aa12.31□□□□□ -0.44
LIMS1-201ENST00000332345 MED29Q9NX70 200 aa12.31□□□□□ -0.44
LIMS1-201ENST00000332345 ST6GALNAC2Q9UJ37 374 aa12.31□□□□□ -0.44
LIMS1-201ENST00000332345 AMDHD2Q9Y303 409 aa12.31□□□□□ -0.44
LIMS1-201ENST00000332345 MAGED1Q9Y5V3 778 aaPredicted RBP12.31□□□□□ -0.44
LIMS1-201ENST00000332345 V9GYQ6 96 aa12.31□□□□□ -0.44
LIMS1-201ENST00000332345 A0A087WUU8 490 aa12.3□□□□□ -0.44
LIMS1-201ENST00000332345 hCG_2039718K7EN88 272 aa12.3□□□□□ -0.44
LIMS1-201ENST00000332345 GYG2O15488 501 aa12.3□□□□□ -0.44
LIMS1-201ENST00000332345 UBOX5O94941 541 aa12.3□□□□□ -0.44
LIMS1-201ENST00000332345 BCL10O95999 233 aa12.3□□□□□ -0.44
LIMS1-201ENST00000332345 WNT11O96014 354 aa12.3□□□□□ -0.44
LIMS1-201ENST00000332345 CD3EP07766 207 aa12.3□□□□□ -0.44
LIMS1-201ENST00000332345 SAGP10523 405 aaPredicted RBP12.3□□□□□ -0.44
LIMS1-201ENST00000332345 LOXP28300 417 aaPredicted RBP12.3□□□□□ -0.44
LIMS1-201ENST00000332345 AQP2P41181 271 aa12.3□□□□□ -0.44
LIMS1-201ENST00000332345 BIDP55957 195 aa12.3□□□□□ -0.44
LIMS1-201ENST00000332345 PRPS1P60891 318 aa12.3□□□□□ -0.44
LIMS1-201ENST00000332345 VLDLRP98155 873 aa12.3□□□□□ -0.44
LIMS1-201ENST00000332345 RPL18Q07020 188 aaKnown RBP12.3□□□□□ -0.44
LIMS1-201ENST00000332345 LGALS3BPQ08380 585 aa12.3□□□□□ -0.44
LIMS1-201ENST00000332345 CAMK2DQ13557 499 aa12.3□□□□□ -0.44
LIMS1-201ENST00000332345 LAPTM4AQ15012 233 aa12.3□□□□□ -0.44
LIMS1-201ENST00000332345 ANKDD1AQ495B1 522 aa12.3□□□□□ -0.44
LIMS1-201ENST00000332345 NCMAPQ5T1S8 102 aa12.3□□□□□ -0.44
LIMS1-201ENST00000332345 CARD17Q5XLA6 110 aa12.3□□□□□ -0.44
LIMS1-201ENST00000332345 ANKRD16Q6P6B7 361 aa12.3□□□□□ -0.44
LIMS1-201ENST00000332345 KLHL24Q6TFL4 600 aa12.3□□□□□ -0.44
LIMS1-201ENST00000332345 CYP2R1Q6VVX0 501 aa12.3□□□□□ -0.44
LIMS1-201ENST00000332345 DHFR2Q86XF0 187 aa12.3□□□□□ -0.44
LIMS1-201ENST00000332345 NRMQ8IXM6 262 aa12.3□□□□□ -0.44
LIMS1-201ENST00000332345 FAM86B1Q8N7N1 296 aa12.3□□□□□ -0.44
LIMS1-201ENST00000332345 NRGNQ92686 78 aa12.3□□□□□ -0.44
LIMS1-201ENST00000332345 ALKBH3Q96Q83 286 aaPredicted RBP12.3□□□□□ -0.44
LIMS1-201ENST00000332345 ZNF347Q96SE7 839 aa12.3□□□□□ -0.44
LIMS1-201ENST00000332345 PIP5K1AQ99755 562 aa12.3□□□□□ -0.44
LIMS1-201ENST00000332345 THTPAQ9BU02 230 aa12.3□□□□□ -0.44
LIMS1-201ENST00000332345 CRLF2Q9HC73 371 aa12.3□□□□□ -0.44
LIMS1-201ENST00000332345 GPR35Q9HC97 309 aa12.3□□□□□ -0.44
LIMS1-201ENST00000332345 IL1RAPQ9NPH3 570 aa12.3□□□□□ -0.44
LIMS1-201ENST00000332345 OBP2BQ9NPH6 170 aa12.3□□□□□ -0.44
LIMS1-201ENST00000332345 INIPQ9NRY2 104 aa12.3□□□□□ -0.44
LIMS1-201ENST00000332345 SLC25A15Q9Y619 301 aa12.3□□□□□ -0.44
LIMS1-201ENST00000332345 EFCAB9A8MZ26 197 aa12.29□□□□□ -0.44
LIMS1-201ENST00000332345 M0R3G1 203 aa12.29□□□□□ -0.44
LIMS1-201ENST00000332345 PIP5K1CO60331 668 aa12.29□□□□□ -0.44
LIMS1-201ENST00000332345 F13BP05160 661 aa12.29□□□□□ -0.44
LIMS1-201ENST00000332345 FABP3P05413 133 aa12.29□□□□□ -0.44
LIMS1-201ENST00000332345 TSPAN19P0C672 248 aa12.29□□□□□ -0.44
LIMS1-201ENST00000332345 CSNK1A1P48729 337 aa12.29□□□□□ -0.44
LIMS1-201ENST00000332345 SLC9A3P48764 834 aa12.29□□□□□ -0.44
LIMS1-201ENST00000332345 UBE2NP61088 152 aaKnown RBP12.29□□□□□ -0.44
LIMS1-201ENST00000332345 KEAP1Q14145 624 aa12.29□□□□□ -0.44
LIMS1-201ENST00000332345 DNAL1Q4LDG9 190 aa12.29□□□□□ -0.44
LIMS1-201ENST00000332345 FGD3Q5JSP0 725 aa12.29□□□□□ -0.44
LIMS1-201ENST00000332345 PODNL1Q6PEZ8 512 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms