RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 CXorf51AA0A1B0GTR3 108 aa22.25■■□□□ 1.15
SOX1-201ENST00000330949 SULT2B1O00204 365 aa22.25■■□□□ 1.15
SOX1-201ENST00000330949 PRKRAO75569 313 aaKnown RBP22.25■■□□□ 1.15
SOX1-201ENST00000330949 NAA10P41227 235 aaPredicted RBP22.25■■□□□ 1.15
SOX1-201ENST00000330949 PPT1P50897 306 aa22.25■■□□□ 1.15
SOX1-201ENST00000330949 STEAP1BQ6NZ63 245 aa22.25■■□□□ 1.15
SOX1-201ENST00000330949 WDR88Q6ZMY6 472 aa22.25■■□□□ 1.15
SOX1-201ENST00000330949 MAMSTRQ6ZN01 415 aa22.25■■□□□ 1.15
SOX1-201ENST00000330949 WDSUB1Q8N9V3 476 aa22.25■■□□□ 1.15
SOX1-201ENST00000330949 PPP1R1CQ8WVI7 109 aa22.25■■□□□ 1.15
SOX1-201ENST00000330949 SLC39A7Q92504 469 aa22.25■■□□□ 1.15
SOX1-201ENST00000330949 OTUB2Q96DC9 234 aa22.25■■□□□ 1.15
SOX1-201ENST00000330949 SLC25A21Q9BQT8 299 aaPredicted RBP22.25■■□□□ 1.15
SOX1-201ENST00000330949 ZNF705EA8MWA4 302 aaPredicted RBP22.25■■□□□ 1.15
SOX1-201ENST00000330949 ST8SIA5O15466 376 aa22.25■■□□□ 1.15
SOX1-201ENST00000330949 EFEMP2O95967 443 aa22.25■■□□□ 1.15
SOX1-201ENST00000330949 CD3DP04234 171 aa22.25■■□□□ 1.15
SOX1-201ENST00000330949 TPT1P13693 172 aaKnown RBP22.25■■□□□ 1.15
SOX1-201ENST00000330949 ZNF136P52737 540 aa22.25■■□□□ 1.15
SOX1-201ENST00000330949 EIPR1Q53HC9 387 aa22.25■■□□□ 1.15
SOX1-201ENST00000330949 ARHGAP11AQ6P4F7 1023 aa22.25■■□□□ 1.15
SOX1-201ENST00000330949 UNQ6126/PRO20091Q6UXV3 157 aa22.25■■□□□ 1.15
SOX1-201ENST00000330949 RAD51AP1Q96B01 352 aa22.25■■□□□ 1.15
SOX1-201ENST00000330949 ZC3H10Q96K80 434 aaKnown RBP22.25■■□□□ 1.15
SOX1-201ENST00000330949 HSPA12BQ96MM6 686 aa22.25■■□□□ 1.15
SOX1-201ENST00000330949 POTEKPQ9BYX7 375 aa22.25■■□□□ 1.15
SOX1-201ENST00000330949 HCFC1R1Q9NWW0 138 aa22.25■■□□□ 1.15
SOX1-201ENST00000330949 RCC2Q9P258 522 aaKnown RBP22.25■■□□□ 1.15
SOX1-201ENST00000330949 FARS2O95363 451 aaKnown RBP22.24■■□□□ 1.15
SOX1-201ENST00000330949 PGDP52209 483 aa22.24■■□□□ 1.15
SOX1-201ENST00000330949 RAB33AQ14088 237 aa22.24■■□□□ 1.15
SOX1-201ENST00000330949 TMED4Q7Z7H5 227 aa22.24■■□□□ 1.15
SOX1-201ENST00000330949 TRAPPC5Q8IUR0 188 aa22.24■■□□□ 1.15
SOX1-201ENST00000330949 NRIP2Q9BQI9 281 aa22.24■■□□□ 1.15
SOX1-201ENST00000330949 TMEM231Q9H6L2 316 aa22.24■■□□□ 1.15
SOX1-201ENST00000330949 MTHFD2LQ9H903 347 aaPredicted RBP22.24■■□□□ 1.15
SOX1-201ENST00000330949 MYOZ1Q9NP98 299 aaPredicted RBP22.24■■□□□ 1.15
SOX1-201ENST00000330949 ACKR4Q9NPB9 350 aa22.24■■□□□ 1.15
SOX1-201ENST00000330949 PLAGL1Q9UM63 463 aa22.24■■□□□ 1.15
SOX1-201ENST00000330949 TRAV27A0A087WT01 109 aa22.24■■□□□ 1.15
SOX1-201ENST00000330949 LEFTY2O00292 366 aa22.24■■□□□ 1.15
SOX1-201ENST00000330949 CD34P28906 385 aa22.24■■□□□ 1.15
SOX1-201ENST00000330949 SSBP1Q04837 148 aaKnown RBP22.24■■□□□ 1.15
SOX1-201ENST00000330949 PJVKQ0ZLH3 352 aa22.24■■□□□ 1.15
SOX1-201ENST00000330949 LIPNQ5VXI9 398 aa22.24■■□□□ 1.15
SOX1-201ENST00000330949 ZNF836Q6ZNA1 936 aa22.24■■□□□ 1.15
SOX1-201ENST00000330949 OR2L13Q8N349 312 aa22.24■■□□□ 1.15
SOX1-201ENST00000330949 OR5AP2Q8NGF4 316 aa22.24■■□□□ 1.15
SOX1-201ENST00000330949 OR51A7Q8NH64 312 aa22.24■■□□□ 1.15
SOX1-201ENST00000330949 CNRIP1Q96F85 164 aaPredicted RBP22.24■■□□□ 1.15
SOX1-201ENST00000330949 KLHL31Q9H511 634 aa22.24■■□□□ 1.15
SOX1-201ENST00000330949 ASF1AQ9Y294 204 aa22.24■■□□□ 1.15
SOX1-201ENST00000330949 RPH3AQ9Y2J0 694 aaPredicted RBP22.24■■□□□ 1.15
SOX1-201ENST00000330949 PHYHO14832 338 aa22.23■■□□□ 1.15
SOX1-201ENST00000330949 OR2T1O43869 369 aa22.23■■□□□ 1.15
SOX1-201ENST00000330949 NDUFS1P28331 727 aa22.23■■□□□ 1.15
SOX1-201ENST00000330949 REEP5Q00765 189 aa22.23■■□□□ 1.15
SOX1-201ENST00000330949 AMZ1Q400G9 498 aa22.23■■□□□ 1.15
SOX1-201ENST00000330949 TPGS2Q68CL5 300 aa22.23■■□□□ 1.15
SOX1-201ENST00000330949 FRRS1Q6ZNA5 592 aa22.23■■□□□ 1.15
SOX1-201ENST00000330949 TMPRSS12Q86WS5 348 aa22.23■■□□□ 1.15
SOX1-201ENST00000330949 RPS4Y2Q8TD47 263 aa22.23■■□□□ 1.15
SOX1-201ENST00000330949 TCTEX1D2Q8WW35 142 aa22.23■■□□□ 1.15
SOX1-201ENST00000330949 TRPV4Q9HBA0 871 aa22.23■■□□□ 1.15
SOX1-201ENST00000330949 PRSS16Q9NQE7 514 aa22.23■■□□□ 1.15
SOX1-201ENST00000330949 C2orf42Q9NWW7 574 aa22.23■■□□□ 1.15
SOX1-201ENST00000330949 ICAM5Q9UMF0 924 aa22.23■■□□□ 1.15
SOX1-201ENST00000330949 DMRT1Q9Y5R6 373 aa22.23■■□□□ 1.15
SOX1-201ENST00000330949 TXNL1O43396 289 aa22.23■■□□□ 1.15
SOX1-201ENST00000330949 CERS1P27544 350 aa22.23■■□□□ 1.15
SOX1-201ENST00000330949 MAGEB1P43366 347 aa22.23■■□□□ 1.15
SOX1-201ENST00000330949 GGTLC2Q14390 218 aa22.23■■□□□ 1.15
SOX1-201ENST00000330949 ZNF750Q32MQ0 723 aa22.23■■□□□ 1.15
SOX1-201ENST00000330949 GFOD2Q3B7J2 385 aa22.23■■□□□ 1.15
SOX1-201ENST00000330949 ACER2Q5QJU3 275 aa22.23■■□□□ 1.15
SOX1-201ENST00000330949 DCUN1D3Q8IWE4 304 aa22.23■■□□□ 1.15
SOX1-201ENST00000330949 OR8S1Q8NH09 359 aa22.23■■□□□ 1.15
SOX1-201ENST00000330949 ADAMTS15Q8TE58 950 aa22.23■■□□□ 1.15
SOX1-201ENST00000330949 ACTRT3Q9BYD9 372 aa22.23■■□□□ 1.15
SOX1-201ENST00000330949 TMEM27Q9HBJ8 222 aa22.23■■□□□ 1.15
SOX1-201ENST00000330949 SLC25A13Q9UJS0 675 aa22.23■■□□□ 1.15
SOX1-201ENST00000330949 RANBP2P49792 3224 aaKnown RBP22.22■■□□□ 1.15
SOX1-201ENST00000330949 MCIDASD6RGH6 385 aa22.22■■□□□ 1.15
SOX1-201ENST00000330949 SDHAP31040 664 aa22.22■■□□□ 1.15
SOX1-201ENST00000330949 MC3RP41968 323 aa22.22■■□□□ 1.15
SOX1-201ENST00000330949 RBM34P42696 430 aaKnown RBP22.22■■□□□ 1.15
SOX1-201ENST00000330949 ANKRD16Q6P6B7 361 aa22.22■■□□□ 1.15
SOX1-201ENST00000330949 SLC35F3Q8IY50 421 aa22.22■■□□□ 1.15
SOX1-201ENST00000330949 CLEC1AQ8NC01 280 aa22.22■■□□□ 1.15
SOX1-201ENST00000330949 C14orf79Q96F83 325 aa22.22■■□□□ 1.15
SOX1-201ENST00000330949 PIK3IP1Q96FE7 263 aa22.22■■□□□ 1.15
SOX1-201ENST00000330949 NRTNQ99748 197 aa22.22■■□□□ 1.15
SOX1-201ENST00000330949 EDEM2Q9BV94 578 aa22.22■■□□□ 1.15
SOX1-201ENST00000330949 MED31Q9Y3C7 131 aa22.22■■□□□ 1.15
SOX1-201ENST00000330949 ZFPL1O95159 310 aa22.22■■□□□ 1.15
SOX1-201ENST00000330949 RPN2P04844 631 aa22.22■■□□□ 1.15
SOX1-201ENST00000330949 PRKXP51817 358 aa22.22■■□□□ 1.15
SOX1-201ENST00000330949 ATP1B3P54709 279 aa22.22■■□□□ 1.15
SOX1-201ENST00000330949 SLC9A5Q14940 896 aa22.22■■□□□ 1.15
SOX1-201ENST00000330949 MRM1Q6IN84 353 aaKnown RBP22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms