RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 ATP8B1O43520 1251 aa12.61□□□□□ -0.39
CTHRC1-201ENST00000330295 SEC14L2O76054 403 aa12.61□□□□□ -0.39
CTHRC1-201ENST00000330295 IGHV2-5P01817 119 aa12.61□□□□□ -0.39
CTHRC1-201ENST00000330295 NR2F1P10589 423 aa12.61□□□□□ -0.39
CTHRC1-201ENST00000330295 UBL4AP11441 157 aa12.61□□□□□ -0.39
CTHRC1-201ENST00000330295 CDH2P19022 906 aaPredicted RBP12.61□□□□□ -0.39
CTHRC1-201ENST00000330295 NCF2P19878 526 aaPredicted RBP12.61□□□□□ -0.39
CTHRC1-201ENST00000330295 PAX7P23759 505 aa12.61□□□□□ -0.39
CTHRC1-201ENST00000330295 ATP4BP51164 291 aa12.61□□□□□ -0.39
CTHRC1-201ENST00000330295 P2RX1P51575 399 aa12.61□□□□□ -0.39
CTHRC1-201ENST00000330295 SLC16A1P53985 500 aa12.61□□□□□ -0.39
CTHRC1-201ENST00000330295 CSNK2A1P68400 391 aaPredicted RBP12.61□□□□□ -0.39
CTHRC1-201ENST00000330295 RELBQ01201 579 aa12.61□□□□□ -0.39
CTHRC1-201ENST00000330295 ZNF141Q15928 474 aa12.61□□□□□ -0.39
CTHRC1-201ENST00000330295 C2orf68Q2NKX9 166 aa12.61□□□□□ -0.39
CTHRC1-201ENST00000330295 AVPI1Q5T686 147 aa12.61□□□□□ -0.39
CTHRC1-201ENST00000330295 TSPO2Q5TGU0 170 aa12.61□□□□□ -0.39
CTHRC1-201ENST00000330295 C3orf33Q6P1S2 294 aa12.61□□□□□ -0.39
CTHRC1-201ENST00000330295 CBLN3Q6UW01 205 aa12.61□□□□□ -0.39
CTHRC1-201ENST00000330295 CCBE1Q6UXH8 406 aaPredicted RBP12.61□□□□□ -0.39
CTHRC1-201ENST00000330295 TMPPEQ6ZT21 453 aa12.61□□□□□ -0.39
CTHRC1-201ENST00000330295 ADGRG3Q86Y34 549 aa12.61□□□□□ -0.39
CTHRC1-201ENST00000330295 RAB8BQ92930 207 aa12.61□□□□□ -0.39
CTHRC1-201ENST00000330295 ROPN1LQ96C74 230 aa12.61□□□□□ -0.39
CTHRC1-201ENST00000330295 ARL5BQ96KC2 179 aa12.61□□□□□ -0.39
CTHRC1-201ENST00000330295 ZNF350Q9GZX5 532 aa12.61□□□□□ -0.39
CTHRC1-201ENST00000330295 TCF7L1Q9HCS4 588 aa12.61□□□□□ -0.39
CTHRC1-201ENST00000330295 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.61□□□□□ -0.39
CTHRC1-201ENST00000330295 CALML5Q9NZT1 146 aa12.61□□□□□ -0.39
CTHRC1-201ENST00000330295 MKLN1Q9UL63 735 aa12.61□□□□□ -0.39
CTHRC1-201ENST00000330295 SLC35A3Q9Y2D2 325 aa12.61□□□□□ -0.39
CTHRC1-201ENST00000330295 RYR2Q92736 4967 aa12.6□□□□□ -0.39
CTHRC1-201ENST00000330295 C5orf63A6NC05 138 aa12.6□□□□□ -0.39
CTHRC1-201ENST00000330295 OR6C65A6NJZ3 312 aa12.6□□□□□ -0.39
CTHRC1-201ENST00000330295 NPIPB9F8W1W9 429 aa12.6□□□□□ -0.39
CTHRC1-201ENST00000330295 OIP5O43482 229 aa12.6□□□□□ -0.39
CTHRC1-201ENST00000330295 EDF1O60869 148 aaKnown RBP12.6□□□□□ -0.39
CTHRC1-201ENST00000330295 CYP7B1O75881 506 aa12.6□□□□□ -0.39
CTHRC1-201ENST00000330295 NDUFA7O95182 113 aa12.6□□□□□ -0.39
CTHRC1-201ENST00000330295 CSTAP01040 98 aa12.6□□□□□ -0.39
CTHRC1-201ENST00000330295 IGLV1-44P01699 117 aa12.6□□□□□ -0.39
CTHRC1-201ENST00000330295 CRYBA1P05813 215 aa12.6□□□□□ -0.39
CTHRC1-201ENST00000330295 CRATP43155 626 aa12.6□□□□□ -0.39
CTHRC1-201ENST00000330295 CCR4P51679 360 aa12.6□□□□□ -0.39
CTHRC1-201ENST00000330295 MVKQ03426 396 aa12.6□□□□□ -0.39
CTHRC1-201ENST00000330295 COL10A1Q03692 680 aa12.6□□□□□ -0.39
CTHRC1-201ENST00000330295 CBFBQ13951 182 aa12.6□□□□□ -0.39
CTHRC1-201ENST00000330295 PDZK1Q5T2W1 519 aa12.6□□□□□ -0.39
CTHRC1-201ENST00000330295 METTL21CQ5VZV1 264 aa12.6□□□□□ -0.39
CTHRC1-201ENST00000330295 WDFY1Q8IWB7 410 aa12.6□□□□□ -0.39
CTHRC1-201ENST00000330295 OR5W2Q8NH69 310 aa12.6□□□□□ -0.39
CTHRC1-201ENST00000330295 RFWD2Q8NHY2 731 aa12.6□□□□□ -0.39
CTHRC1-201ENST00000330295 PIGXQ8TBF5 258 aa12.6□□□□□ -0.39
CTHRC1-201ENST00000330295 GPR119Q8TDV5 335 aa12.6□□□□□ -0.39
CTHRC1-201ENST00000330295 VPS33AQ96AX1 596 aa12.6□□□□□ -0.39
CTHRC1-201ENST00000330295 EBF4Q9BQW3 602 aa12.6□□□□□ -0.39
CTHRC1-201ENST00000330295 SERHL2Q9H4I8 314 aa12.6□□□□□ -0.39
CTHRC1-201ENST00000330295 MTHFD2LQ9H903 347 aaPredicted RBP12.6□□□□□ -0.39
CTHRC1-201ENST00000330295 TPT1P8Q9HAU6 139 aa12.6□□□□□ -0.39
CTHRC1-201ENST00000330295 NPHS2Q9NP85 383 aa12.6□□□□□ -0.39
CTHRC1-201ENST00000330295 ZNF446Q9NWS9 450 aa12.6□□□□□ -0.39
CTHRC1-201ENST00000330295 CCDC167Q9P0B6 97 aa12.6□□□□□ -0.39
CTHRC1-201ENST00000330295 P2RX2Q9UBL9 471 aa12.6□□□□□ -0.39
CTHRC1-201ENST00000330295 CARD8Q9Y2G2 431 aa12.6□□□□□ -0.39
CTHRC1-201ENST00000330295 CMAHPQ9Y471 501 aa12.6□□□□□ -0.39
CTHRC1-201ENST00000330295 NOTCH3Q9UM47 2321 aa12.59□□□□□ -0.39
CTHRC1-201ENST00000330295 A0A0G2JND7 137 aa12.59□□□□□ -0.39
CTHRC1-201ENST00000330295 HMGN4O00479 90 aa12.59□□□□□ -0.39
CTHRC1-201ENST00000330295 NR5A2O00482 541 aa12.59□□□□□ -0.39
CTHRC1-201ENST00000330295 FCMRO60667 390 aa12.59□□□□□ -0.39
CTHRC1-201ENST00000330295 NCR1O76036 304 aa12.59□□□□□ -0.39
CTHRC1-201ENST00000330295 GPANK1O95872 356 aa12.59□□□□□ -0.39
CTHRC1-201ENST00000330295 VIMP08670 466 aaKnown RBP12.59□□□□□ -0.39
CTHRC1-201ENST00000330295 UQCRBP14927 111 aa12.59□□□□□ -0.39
CTHRC1-201ENST00000330295 PPIBP23284 216 aaKnown RBP12.59□□□□□ -0.39
CTHRC1-201ENST00000330295 CDKN2CP42773 168 aa12.59□□□□□ -0.39
CTHRC1-201ENST00000330295 MTNR1AP48039 350 aa12.59□□□□□ -0.39
CTHRC1-201ENST00000330295 EVX1P49640 407 aa12.59□□□□□ -0.39
CTHRC1-201ENST00000330295 UBE2NP61088 152 aaKnown RBP12.59□□□□□ -0.39
CTHRC1-201ENST00000330295 TBRG1Q3YBR2 411 aa12.59□□□□□ -0.39
CTHRC1-201ENST00000330295 AGKQ53H12 422 aa12.59□□□□□ -0.39
CTHRC1-201ENST00000330295 SLC25A53Q5H9E4 307 aa12.59□□□□□ -0.39
CTHRC1-201ENST00000330295 BLOC1S3Q6QNY0 202 aa12.59□□□□□ -0.39
CTHRC1-201ENST00000330295 LRRC74BQ6ZQY2 392 aa12.59□□□□□ -0.39
CTHRC1-201ENST00000330295 RETREG3Q86VR2 466 aa12.59□□□□□ -0.39
CTHRC1-201ENST00000330295 CMIPQ8IY22 773 aa12.59□□□□□ -0.39
CTHRC1-201ENST00000330295 DEFB108BQ8NET1 73 aa12.59□□□□□ -0.39
CTHRC1-201ENST00000330295 OR9I1Q8NGQ6 314 aa12.59□□□□□ -0.39
CTHRC1-201ENST00000330295 PNPT1Q8TCS8 783 aaKnown RBP12.59□□□□□ -0.39
CTHRC1-201ENST00000330295 TMEM234Q8WY98 164 aa12.59□□□□□ -0.39
CTHRC1-201ENST00000330295 ZNF524Q96C55 264 aa12.59□□□□□ -0.39
CTHRC1-201ENST00000330295 SPDL1Q96EA4 605 aa12.59□□□□□ -0.39
CTHRC1-201ENST00000330295 MS4A7Q9GZW8 240 aaPredicted RBP12.59□□□□□ -0.39
CTHRC1-201ENST00000330295 LAT2Q9GZY6 243 aa12.59□□□□□ -0.39
CTHRC1-201ENST00000330295 ARMC7Q9H6L4 198 aa12.59□□□□□ -0.39
CTHRC1-201ENST00000330295 SERINC1Q9NRX5 453 aa12.59□□□□□ -0.39
CTHRC1-201ENST00000330295 C1RLQ9NZP8 487 aa12.59□□□□□ -0.39
CTHRC1-201ENST00000330295 RNF114Q9Y508 228 aa12.59□□□□□ -0.39
CTHRC1-201ENST00000330295 DNAH3Q8TD57 4116 aa12.59□□□□□ -0.39
CTHRC1-201ENST00000330295 A0A096LPI6 279 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms