RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 TNFRSF13CQ96RJ3 184 aa14.76□□□□□ -0.05
PDLIM1-201ENST00000329399 SERINC1Q9NRX5 453 aa14.76□□□□□ -0.05
PDLIM1-201ENST00000329399 TMED7Q9Y3B3 224 aa14.76□□□□□ -0.05
PDLIM1-201ENST00000329399 CEPT1Q9Y6K0 416 aa14.76□□□□□ -0.05
PDLIM1-201ENST00000329399 NAV2Q8IVL1 2488 aa14.76□□□□□ -0.05
PDLIM1-201ENST00000329399 A0A1B0GUH1 482 aa14.76□□□□□ -0.05
PDLIM1-201ENST00000329399 CH25HO95992 272 aa14.76□□□□□ -0.05
PDLIM1-201ENST00000329399 MT-ND2P03891 347 aa14.76□□□□□ -0.05
PDLIM1-201ENST00000329399 TPOP07202 933 aa14.76□□□□□ -0.05
PDLIM1-201ENST00000329399 TSPAN19P0C672 248 aa14.76□□□□□ -0.05
PDLIM1-201ENST00000329399 DBTP11182 482 aaKnown RBP14.76□□□□□ -0.05
PDLIM1-201ENST00000329399 ZNF3P17036 446 aa14.76□□□□□ -0.05
PDLIM1-201ENST00000329399 GDF1P27539 372 aa14.76□□□□□ -0.05
PDLIM1-201ENST00000329399 CLK1P49759 484 aaKnown RBP14.76□□□□□ -0.05
PDLIM1-201ENST00000329399 FXYD6P3P58550 94 aa14.76□□□□□ -0.05
PDLIM1-201ENST00000329399 IRF3Q14653 427 aa14.76□□□□□ -0.05
PDLIM1-201ENST00000329399 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.76□□□□□ -0.05
PDLIM1-201ENST00000329399 GXYLT1Q4G148 440 aa14.76□□□□□ -0.05
PDLIM1-201ENST00000329399 FOXB2Q5VYV0 432 aa14.76□□□□□ -0.05
PDLIM1-201ENST00000329399 MAMDC2Q7Z304 686 aaPredicted RBP14.76□□□□□ -0.05
PDLIM1-201ENST00000329399 SLC46A3Q7Z3Q1 461 aa14.76□□□□□ -0.05
PDLIM1-201ENST00000329399 YRDCQ86U90 279 aaKnown RBP14.76□□□□□ -0.05
PDLIM1-201ENST00000329399 KLHDC3Q9BQ90 382 aa14.76□□□□□ -0.05
PDLIM1-201ENST00000329399 POTEKPQ9BYX7 375 aa14.76□□□□□ -0.05
PDLIM1-201ENST00000329399 MCCC2Q9HCC0 563 aa14.76□□□□□ -0.05
PDLIM1-201ENST00000329399 FGF20Q9NP95 211 aaPredicted RBP14.76□□□□□ -0.05
PDLIM1-201ENST00000329399 ACKR4Q9NPB9 350 aa14.76□□□□□ -0.05
PDLIM1-201ENST00000329399 CHCHD3Q9NX63 227 aaKnown RBP14.76□□□□□ -0.05
PDLIM1-201ENST00000329399 WARS2Q9UGM6 360 aaKnown RBP14.76□□□□□ -0.05
PDLIM1-201ENST00000329399 DIMT1Q9UNQ2 313 aaKnown RBP14.76□□□□□ -0.05
PDLIM1-201ENST00000329399 MEMO1Q9Y316 297 aa14.76□□□□□ -0.05
PDLIM1-201ENST00000329399 TRGV5A0A0B4J1U4 118 aa14.75□□□□□ -0.05
PDLIM1-201ENST00000329399 CCDC160A6NGH7 325 aa14.75□□□□□ -0.05
PDLIM1-201ENST00000329399 SNPHO15079 494 aa14.75□□□□□ -0.05
PDLIM1-201ENST00000329399 NPIPB7O75200 414 aa14.75□□□□□ -0.05
PDLIM1-201ENST00000329399 TRAPPC6AO75865 159 aa14.75□□□□□ -0.05
PDLIM1-201ENST00000329399 NTN1O95631 604 aa14.75□□□□□ -0.05
PDLIM1-201ENST00000329399 FADS2O95864 444 aaKnown RBP14.75□□□□□ -0.05
PDLIM1-201ENST00000329399 ASAH2BP0C7U1 165 aa14.75□□□□□ -0.05
PDLIM1-201ENST00000329399 PRKCAP17252 672 aa14.75□□□□□ -0.05
PDLIM1-201ENST00000329399 NOS3P29474 1203 aa14.75□□□□□ -0.05
PDLIM1-201ENST00000329399 HTR1FP30939 366 aa14.75□□□□□ -0.05
PDLIM1-201ENST00000329399 MTNR1AP48039 350 aa14.75□□□□□ -0.05
PDLIM1-201ENST00000329399 MASP1P48740 699 aa14.75□□□□□ -0.05
PDLIM1-201ENST00000329399 ZNF91Q05481 1191 aa14.75□□□□□ -0.05
PDLIM1-201ENST00000329399 FHL1Q13642 323 aa14.75□□□□□ -0.05
PDLIM1-201ENST00000329399 WIPI1Q5MNZ9 446 aaPredicted RBP14.75□□□□□ -0.05
PDLIM1-201ENST00000329399 FAM69AQ5T7M9 428 aa14.75□□□□□ -0.05
PDLIM1-201ENST00000329399 GPR139Q6DWJ6 353 aa14.75□□□□□ -0.05
PDLIM1-201ENST00000329399 ADGRG3Q86Y34 549 aa14.75□□□□□ -0.05
PDLIM1-201ENST00000329399 FADS6Q8N9I5 356 aa14.75□□□□□ -0.05
PDLIM1-201ENST00000329399 OR1J4Q8NGS1 313 aa14.75□□□□□ -0.05
PDLIM1-201ENST00000329399 OR51A7Q8NH64 312 aa14.75□□□□□ -0.05
PDLIM1-201ENST00000329399 RAB2BQ8WUD1 216 aa14.75□□□□□ -0.05
PDLIM1-201ENST00000329399 ITLN2Q8WWU7 325 aaPredicted RBP14.75□□□□□ -0.05
PDLIM1-201ENST00000329399 ZBTB8AQ96BR9 441 aa14.75□□□□□ -0.05
PDLIM1-201ENST00000329399 DDIT4LQ96D03 193 aa14.75□□□□□ -0.05
PDLIM1-201ENST00000329399 DMRTA2Q96SC8 542 aa14.75□□□□□ -0.05
PDLIM1-201ENST00000329399 MYCBPQ99417 103 aaPredicted RBP14.75□□□□□ -0.05
PDLIM1-201ENST00000329399 DOK1Q99704 481 aa14.75□□□□□ -0.05
PDLIM1-201ENST00000329399 LDAHQ9H6V9 325 aa14.75□□□□□ -0.05
PDLIM1-201ENST00000329399 DNAJC27Q9NZQ0 273 aa14.75□□□□□ -0.05
PDLIM1-201ENST00000329399 AASSQ9UDR5 926 aa14.75□□□□□ -0.05
PDLIM1-201ENST00000329399 ERGIC3Q9Y282 383 aa14.75□□□□□ -0.05
PDLIM1-201ENST00000329399 CORINQ9Y5Q5 1042 aa14.75□□□□□ -0.05
PDLIM1-201ENST00000329399 COMMD3-BMI1R4GMX3 469 aa14.75□□□□□ -0.05
PDLIM1-201ENST00000329399 MAST4O15021 2626 aa14.75□□□□□ -0.05
PDLIM1-201ENST00000329399 NCOA6Q14686 2063 aaPredicted RBP14.74□□□□□ -0.05
PDLIM1-201ENST00000329399 SLC22A31A6NKX4 558 aa14.74□□□□□ -0.05
PDLIM1-201ENST00000329399 PRR23D1E9PI22 279 aaPredicted RBP14.74□□□□□ -0.05
PDLIM1-201ENST00000329399 H3BSA7 217 aa14.74□□□□□ -0.05
PDLIM1-201ENST00000329399 SUSD5O60279 629 aa14.74□□□□□ -0.05
PDLIM1-201ENST00000329399 RAB36O95755 333 aa14.74□□□□□ -0.05
PDLIM1-201ENST00000329399 HPNP05981 417 aa14.74□□□□□ -0.05
PDLIM1-201ENST00000329399 PRR23D2P0DMB1 279 aaPredicted RBP14.74□□□□□ -0.05
PDLIM1-201ENST00000329399 ACVR2AP27037 513 aa14.74□□□□□ -0.05
PDLIM1-201ENST00000329399 CAPZA2P47755 286 aa14.74□□□□□ -0.05
PDLIM1-201ENST00000329399 NUDT6P53370 316 aa14.74□□□□□ -0.05
PDLIM1-201ENST00000329399 EGR4Q05215 589 aa14.74□□□□□ -0.05
PDLIM1-201ENST00000329399 GLYR1Q49A26 553 aaPredicted RBP14.74□□□□□ -0.05
PDLIM1-201ENST00000329399 RTL6Q6ICC9 239 aa14.74□□□□□ -0.05
PDLIM1-201ENST00000329399 CXXC5Q7LFL8 322 aaKnown RBP14.74□□□□□ -0.05
PDLIM1-201ENST00000329399 ZNF367Q7RTV3 350 aa14.74□□□□□ -0.05
PDLIM1-201ENST00000329399 MEX3DQ86XN8 651 aaKnown RBP14.74□□□□□ -0.05
PDLIM1-201ENST00000329399 C10orf53Q8N6V4 93 aa14.74□□□□□ -0.05
PDLIM1-201ENST00000329399 FAM83FQ8NEG4 500 aaPredicted RBP14.74□□□□□ -0.05
PDLIM1-201ENST00000329399 NEIL3Q8TAT5 605 aa14.74□□□□□ -0.05
PDLIM1-201ENST00000329399 SLC25A43Q8WUT9 341 aaPredicted RBP14.74□□□□□ -0.05
PDLIM1-201ENST00000329399 JAM3Q9BX67 310 aa14.74□□□□□ -0.05
PDLIM1-201ENST00000329399 NRIP3Q9NQ35 241 aa14.74□□□□□ -0.05
PDLIM1-201ENST00000329399 HAO2Q9NYQ3 351 aa14.74□□□□□ -0.05
PDLIM1-201ENST00000329399 CHRNA9Q9UGM1 479 aa14.74□□□□□ -0.05
PDLIM1-201ENST00000329399 EXOSC1Q9Y3B2 195 aaKnown RBP14.74□□□□□ -0.05
PDLIM1-201ENST00000329399 TRAV27A0A087WT01 109 aa14.73□□□□□ -0.05
PDLIM1-201ENST00000329399 AQP7O14520 342 aa14.73□□□□□ -0.05
PDLIM1-201ENST00000329399 PRRG2O14669 202 aa14.73□□□□□ -0.05
PDLIM1-201ENST00000329399 ZIC3O60481 467 aa14.73□□□□□ -0.05
PDLIM1-201ENST00000329399 AHSA1O95433 338 aa14.73□□□□□ -0.05
PDLIM1-201ENST00000329399 TXNDC12O95881 172 aa14.73□□□□□ -0.05
PDLIM1-201ENST00000329399 TCEA1P23193 301 aaKnown RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms