RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 OR5H14A6NHG9 310 aa10.87□□□□□ -0.67
SHMT2-201ENST00000328923 OR52A4PA6NMU1 304 aa10.87□□□□□ -0.67
SHMT2-201ENST00000328923 RPL36A-HNRNPH2H7BZ11 118 aa10.87□□□□□ -0.67
SHMT2-201ENST00000328923 GAPDHSO14556 408 aaPredicted RBP10.87□□□□□ -0.67
SHMT2-201ENST00000328923 NSA2O95478 260 aaKnown RBP10.87□□□□□ -0.67
SHMT2-201ENST00000328923 IL18BPO95998 194 aa10.87□□□□□ -0.67
SHMT2-201ENST00000328923 FGBP02675 491 aa10.87□□□□□ -0.67
SHMT2-201ENST00000328923 CD74P04233 296 aa10.87□□□□□ -0.67
SHMT2-201ENST00000328923 IFNW1P05000 195 aa10.87□□□□□ -0.67
SHMT2-201ENST00000328923 ACRV1P26436 265 aa10.87□□□□□ -0.67
SHMT2-201ENST00000328923 PCBP3P57721 371 aaKnown RBP10.87□□□□□ -0.67
SHMT2-201ENST00000328923 FZD5Q13467 585 aa10.87□□□□□ -0.67
SHMT2-201ENST00000328923 OLFML2AQ68BL7 652 aa10.87□□□□□ -0.67
SHMT2-201ENST00000328923 VHLLQ6RSH7 139 aa10.87□□□□□ -0.67
SHMT2-201ENST00000328923 TRAPPC5Q8IUR0 188 aa10.87□□□□□ -0.67
SHMT2-201ENST00000328923 RNF141Q8WVD5 230 aa10.87□□□□□ -0.67
SHMT2-201ENST00000328923 SLC25A36Q96CQ1 311 aa10.87□□□□□ -0.67
SHMT2-201ENST00000328923 SULT4A1Q9BR01 284 aa10.87□□□□□ -0.67
SHMT2-201ENST00000328923 BOCQ9BWV1 1114 aa10.87□□□□□ -0.67
SHMT2-201ENST00000328923 OR52A5Q9H2C5 316 aa10.87□□□□□ -0.67
SHMT2-201ENST00000328923 PARD6AQ9NPB6 346 aa10.87□□□□□ -0.67
SHMT2-201ENST00000328923 PRSS21Q9Y6M0 314 aa10.87□□□□□ -0.67
SHMT2-201ENST00000328923 TRBC2A0A5B9 178 aa10.87□□□□□ -0.67
SHMT2-201ENST00000328923 M0R143 59 aa10.87□□□□□ -0.67
SHMT2-201ENST00000328923 ITGB1BP1O14713 200 aa10.87□□□□□ -0.67
SHMT2-201ENST00000328923 PPP1R2P9O14990 202 aa10.87□□□□□ -0.67
SHMT2-201ENST00000328923 ATP1B1P05026 303 aa10.87□□□□□ -0.67
SHMT2-201ENST00000328923 C8GP07360 202 aa10.87□□□□□ -0.67
SHMT2-201ENST00000328923 AOAHP28039 575 aa10.87□□□□□ -0.67
SHMT2-201ENST00000328923 ACSM2AQ08AH3 577 aa10.87□□□□□ -0.67
SHMT2-201ENST00000328923 NFATC2Q13469 925 aa10.87□□□□□ -0.67
SHMT2-201ENST00000328923 HNF4GQ14541 408 aa10.87□□□□□ -0.67
SHMT2-201ENST00000328923 TAF13Q15543 124 aa10.87□□□□□ -0.67
SHMT2-201ENST00000328923 PRRT3Q5FWE3 981 aa10.87□□□□□ -0.67
SHMT2-201ENST00000328923 ACSM2BQ68CK6 577 aa10.87□□□□□ -0.67
SHMT2-201ENST00000328923 ADNP2Q6IQ32 1131 aa10.87□□□□□ -0.67
SHMT2-201ENST00000328923 GAREM2Q75VX8 874 aa10.87□□□□□ -0.67
SHMT2-201ENST00000328923 TAF8Q7Z7C8 310 aa10.87□□□□□ -0.67
SHMT2-201ENST00000328923 CMTM4Q8IZR5 234 aa10.87□□□□□ -0.67
SHMT2-201ENST00000328923 CBARPQ8N350 705 aaPredicted RBP10.87□□□□□ -0.67
SHMT2-201ENST00000328923 JAGN1Q8N5M9 183 aa10.87□□□□□ -0.67
SHMT2-201ENST00000328923 C16orf78Q8WTQ4 265 aa10.87□□□□□ -0.67
SHMT2-201ENST00000328923 NUDCD2Q8WVJ2 157 aa10.87□□□□□ -0.67
SHMT2-201ENST00000328923 ZNF649Q9BS31 505 aa10.87□□□□□ -0.67
SHMT2-201ENST00000328923 BHLHE41Q9C0J9 482 aaPredicted RBP10.87□□□□□ -0.67
SHMT2-201ENST00000328923 GPATCH2Q9NW75 528 aa10.87□□□□□ -0.67
SHMT2-201ENST00000328923 FBXW2Q9UKT8 454 aa10.87□□□□□ -0.67
SHMT2-201ENST00000328923 STARD10Q9Y365 291 aa10.87□□□□□ -0.67
SHMT2-201ENST00000328923 ANKRD20A5PA0PJZ0 165 aa10.86□□□□□ -0.67
SHMT2-201ENST00000328923 ZNF587BE7ETH6 402 aa10.86□□□□□ -0.67
SHMT2-201ENST00000328923 FAAHO00519 579 aa10.86□□□□□ -0.67
SHMT2-201ENST00000328923 CIDEAO60543 219 aa10.86□□□□□ -0.67
SHMT2-201ENST00000328923 GSTP1P09211 210 aaKnown RBP10.86□□□□□ -0.67
SHMT2-201ENST00000328923 OR4Q2P0C623 313 aa10.86□□□□□ -0.67
SHMT2-201ENST00000328923 SLC6A11P48066 632 aa10.86□□□□□ -0.67
SHMT2-201ENST00000328923 DHPSP49366 369 aaPredicted RBP10.86□□□□□ -0.67
SHMT2-201ENST00000328923 TRIM40Q6P9F5 258 aa10.86□□□□□ -0.67
SHMT2-201ENST00000328923 SERPINA13PQ6UXR4 307 aa10.86□□□□□ -0.67
SHMT2-201ENST00000328923 CEACAM19Q7Z692 300 aa10.86□□□□□ -0.67
SHMT2-201ENST00000328923 PNLDC1Q8NA58 520 aaKnown RBP10.86□□□□□ -0.67
SHMT2-201ENST00000328923 ACBD4Q8NC06 268 aa10.86□□□□□ -0.67
SHMT2-201ENST00000328923 OR10A7Q8NGE5 316 aa10.86□□□□□ -0.67
SHMT2-201ENST00000328923 OR5AP2Q8NGF4 316 aa10.86□□□□□ -0.67
SHMT2-201ENST00000328923 SECTM1Q8WVN6 248 aa10.86□□□□□ -0.67
SHMT2-201ENST00000328923 OR8D1Q8WZ84 308 aa10.86□□□□□ -0.67
SHMT2-201ENST00000328923 PPCDCQ96CD2 204 aa10.86□□□□□ -0.67
SHMT2-201ENST00000328923 SLC12A9Q9BXP2 914 aa10.86□□□□□ -0.67
SHMT2-201ENST00000328923 CBLN4Q9NTU7 201 aa10.86□□□□□ -0.67
SHMT2-201ENST00000328923 ANGPT4Q9Y264 503 aa10.86□□□□□ -0.67
SHMT2-201ENST00000328923 SZT2Q5T011 3432 aa10.86□□□□□ -0.67
SHMT2-201ENST00000328923 FAM157AC9JC47 383 aa10.86□□□□□ -0.67
SHMT2-201ENST00000328923 PTBP3O95758 552 aaKnown RBP10.86□□□□□ -0.67
SHMT2-201ENST00000328923 FGF7P21781 194 aa10.86□□□□□ -0.67
SHMT2-201ENST00000328923 ELAVL4P26378 380 aaKnown RBP10.86□□□□□ -0.67
SHMT2-201ENST00000328923 CD1CP29017 333 aa10.86□□□□□ -0.67
SHMT2-201ENST00000328923 SULT1A1P50225 295 aa10.86□□□□□ -0.67
SHMT2-201ENST00000328923 TSPAN31Q12999 210 aa10.86□□□□□ -0.67
SHMT2-201ENST00000328923 ZNF234Q14588 700 aa10.86□□□□□ -0.67
SHMT2-201ENST00000328923 ZNF322Q6U7Q0 402 aaPredicted RBP10.86□□□□□ -0.67
SHMT2-201ENST00000328923 FAM151BQ6UXP7 276 aa10.86□□□□□ -0.67
SHMT2-201ENST00000328923 ZNF620Q6ZNG0 422 aa10.86□□□□□ -0.67
SHMT2-201ENST00000328923 ACOT7LQ6ZUV0 252 aa10.86□□□□□ -0.67
SHMT2-201ENST00000328923 OR2A12Q8NGT7 310 aa10.86□□□□□ -0.67
SHMT2-201ENST00000328923 BRIX1Q8TDN6 353 aaKnown RBP10.86□□□□□ -0.67
SHMT2-201ENST00000328923 EID2BQ96D98 161 aa10.86□□□□□ -0.67
SHMT2-201ENST00000328923 PACRGQ96M98 296 aaPredicted RBP10.86□□□□□ -0.67
SHMT2-201ENST00000328923 DIRC2Q96SL1 478 aa10.86□□□□□ -0.67
SHMT2-201ENST00000328923 CHST6Q9GZX3 395 aa10.86□□□□□ -0.67
SHMT2-201ENST00000328923 GAL3ST2Q9H3Q3 398 aa10.86□□□□□ -0.67
SHMT2-201ENST00000328923 ASB8Q9H765 288 aa10.86□□□□□ -0.67
SHMT2-201ENST00000328923 BRF2Q9HAW0 419 aa10.86□□□□□ -0.67
SHMT2-201ENST00000328923 A0A1W2PPK0 400 aa10.85□□□□□ -0.67
SHMT2-201ENST00000328923 H3BNC9 293 aa10.85□□□□□ -0.67
SHMT2-201ENST00000328923 GABARAPH6UMI1 98 aa10.85□□□□□ -0.67
SHMT2-201ENST00000328923 MFNGO00587 321 aa10.85□□□□□ -0.67
SHMT2-201ENST00000328923 MAGEB4O15481 346 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-201ENST00000328923 LRG1P02750 347 aa10.85□□□□□ -0.67
SHMT2-201ENST00000328923 CD5P06127 495 aa10.85□□□□□ -0.67
SHMT2-201ENST00000328923 FAM157CP0CG43 387 aa10.85□□□□□ -0.67
SHMT2-201ENST00000328923 ARAFP10398 606 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms