RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 TMEM129A0AVI4 362 aa14.04□□□□□ -0.16
VARS2-201ENST00000321897 FBXO24O75426 580 aa14.04□□□□□ -0.16
VARS2-201ENST00000321897 SCGNO76038 276 aa14.04□□□□□ -0.16
VARS2-201ENST00000321897 SOD1P00441 154 aa14.04□□□□□ -0.16
VARS2-201ENST00000321897 GZMMP51124 257 aa14.04□□□□□ -0.16
VARS2-201ENST00000321897 DUSP2Q05923 314 aa14.04□□□□□ -0.16
VARS2-201ENST00000321897 ALG11Q2TAA5 492 aa14.04□□□□□ -0.16
VARS2-201ENST00000321897 CLLU1Q5K131 121 aa14.04□□□□□ -0.16
VARS2-201ENST00000321897 Q6ZS52 159 aa14.04□□□□□ -0.16
VARS2-201ENST00000321897 SLC6A18Q96N87 628 aa14.04□□□□□ -0.16
VARS2-201ENST00000321897 SCML1Q9UN30 329 aa14.04□□□□□ -0.16
VARS2-201ENST00000321897 ACOT7O00154 380 aa14.04□□□□□ -0.16
VARS2-201ENST00000321897 DNAJB6O75190 326 aa14.04□□□□□ -0.16
VARS2-201ENST00000321897 MTNR1BP49286 362 aa14.04□□□□□ -0.16
VARS2-201ENST00000321897 DPTQ07507 201 aa14.04□□□□□ -0.16
VARS2-201ENST00000321897 TPBGQ13641 420 aa14.04□□□□□ -0.16
VARS2-201ENST00000321897 MBOAT2Q6ZWT7 520 aa14.04□□□□□ -0.16
VARS2-201ENST00000321897 ZNF584Q8IVC4 421 aa14.04□□□□□ -0.16
VARS2-201ENST00000321897 OR11H7Q8NGC8 314 aa14.04□□□□□ -0.16
VARS2-201ENST00000321897 GPA33Q99795 319 aa14.04□□□□□ -0.16
VARS2-201ENST00000321897 PPIL1Q9Y3C6 166 aa14.04□□□□□ -0.16
VARS2-201ENST00000321897 LOC105371267A0A1B0GV96 52 aa14.03□□□□□ -0.16
VARS2-201ENST00000321897 CFDP00746 253 aaPredicted RBP14.03□□□□□ -0.16
VARS2-201ENST00000321897 CELA2BP08218 269 aaPredicted RBP14.03□□□□□ -0.16
VARS2-201ENST00000321897 CCNOP22674 350 aa14.03□□□□□ -0.16
VARS2-201ENST00000321897 SEC61A1P61619 476 aaKnown RBP14.03□□□□□ -0.16
VARS2-201ENST00000321897 C19orf57Q0VDD7 668 aa14.03□□□□□ -0.16
VARS2-201ENST00000321897 EIF2B1Q14232 305 aaKnown RBP14.03□□□□□ -0.16
VARS2-201ENST00000321897 ELOCQ15369 112 aa14.03□□□□□ -0.16
VARS2-201ENST00000321897 PFDN5Q99471 154 aa14.03□□□□□ -0.16
VARS2-201ENST00000321897 G6PC3Q9BUM1 346 aa14.03□□□□□ -0.16
VARS2-201ENST00000321897 SLC35A3Q9Y2D2 325 aa14.03□□□□□ -0.16
VARS2-201ENST00000321897 V9GY05 133 aa14.03□□□□□ -0.16
VARS2-201ENST00000321897 A0A0B4J2A0 478 aa14.03□□□□□ -0.16
VARS2-201ENST00000321897 SLC16A7O60669 478 aa14.03□□□□□ -0.16
VARS2-201ENST00000321897 GCM2O75603 506 aaPredicted RBP14.03□□□□□ -0.16
VARS2-201ENST00000321897 AGTR1P30556 359 aa14.03□□□□□ -0.16
VARS2-201ENST00000321897 DCTDP32321 178 aa14.03□□□□□ -0.16
VARS2-201ENST00000321897 GPR143P51810 404 aa14.03□□□□□ -0.16
VARS2-201ENST00000321897 NRG3P56975 720 aa14.03□□□□□ -0.16
VARS2-201ENST00000321897 ACTC1P68032 377 aa14.03□□□□□ -0.16
VARS2-201ENST00000321897 ACTA1P68133 377 aa14.03□□□□□ -0.16
VARS2-201ENST00000321897 LCN10Q6JVE6 187 aa14.03□□□□□ -0.16
VARS2-201ENST00000321897 OR5M1Q8NGP8 315 aa14.03□□□□□ -0.16
VARS2-201ENST00000321897 WDFY2Q96P53 400 aa14.03□□□□□ -0.16
VARS2-201ENST00000321897 SMIM3Q9BZL3 60 aa14.03□□□□□ -0.16
VARS2-201ENST00000321897 NKX6-2Q9C056 277 aaPredicted RBP14.03□□□□□ -0.16
VARS2-201ENST00000321897 PARP12Q9H0J9 701 aaKnown RBP14.03□□□□□ -0.16
VARS2-201ENST00000321897 RGCCQ9H4X1 137 aa14.03□□□□□ -0.16
VARS2-201ENST00000321897 SHPKQ9UHJ6 478 aa14.03□□□□□ -0.16
VARS2-201ENST00000321897 SERTAD3Q9UJW9 196 aa14.03□□□□□ -0.16
VARS2-201ENST00000321897 P2RX6O15547 441 aa14.03□□□□□ -0.16
VARS2-201ENST00000321897 AKR1C3P42330 323 aa14.03□□□□□ -0.16
VARS2-201ENST00000321897 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.03□□□□□ -0.16
VARS2-201ENST00000321897 RNASE10Q5GAN6 216 aaKnown RBP14.03□□□□□ -0.16
VARS2-201ENST00000321897 FAM69AQ5T7M9 428 aa14.03□□□□□ -0.16
VARS2-201ENST00000321897 TMEM225Q6GV28 225 aa14.03□□□□□ -0.16
VARS2-201ENST00000321897 H3F3CQ6NXT2 135 aa14.03□□□□□ -0.16
VARS2-201ENST00000321897 NHLRC1Q6VVB1 395 aa14.03□□□□□ -0.16
VARS2-201ENST00000321897 LRRC56Q8IYG6 542 aaPredicted RBP14.03□□□□□ -0.16
VARS2-201ENST00000321897 SVBPQ8N300 66 aa14.03□□□□□ -0.16
VARS2-201ENST00000321897 HAVCR2Q8TDQ0 301 aa14.03□□□□□ -0.16
VARS2-201ENST00000321897 SCARB1Q8WTV0 552 aa14.03□□□□□ -0.16
VARS2-201ENST00000321897 ARL11Q969Q4 196 aa14.03□□□□□ -0.16
VARS2-201ENST00000321897 CNTNAP3BQ96NU0 1288 aa14.03□□□□□ -0.16
VARS2-201ENST00000321897 WDR77Q9BQA1 342 aaPredicted RBP14.03□□□□□ -0.16
VARS2-201ENST00000321897 KIR3DX1Q9H7L2 352 aa14.03□□□□□ -0.16
VARS2-201ENST00000321897 ZNF346Q9UL40 294 aaKnown RBP14.03□□□□□ -0.16
VARS2-201ENST00000321897 TTC28Q96AY4 2481 aa14.02□□□□□ -0.16
VARS2-201ENST00000321897 E9PI62 339 aa14.02□□□□□ -0.16
VARS2-201ENST00000321897 G3V3Y1 287 aa14.02□□□□□ -0.16
VARS2-201ENST00000321897 M0QYG6 137 aa14.02□□□□□ -0.16
VARS2-201ENST00000321897 TRAM1Q15629 374 aa14.02□□□□□ -0.16
VARS2-201ENST00000321897 MAPK14Q16539 360 aa14.02□□□□□ -0.16
VARS2-201ENST00000321897 ZNF585AQ6P3V2 769 aa14.02□□□□□ -0.16
VARS2-201ENST00000321897 IL17RCQ8NAC3 791 aa14.02□□□□□ -0.16
VARS2-201ENST00000321897 MRGPRX1Q96LB2 322 aa14.02□□□□□ -0.16
VARS2-201ENST00000321897 PRSS44E7EML9 344 aa14.02□□□□□ -0.17
VARS2-201ENST00000321897 WNT1P04628 370 aa14.02□□□□□ -0.17
VARS2-201ENST00000321897 ADRB1P08588 477 aa14.02□□□□□ -0.17
VARS2-201ENST00000321897 RORAP35398 523 aa14.02□□□□□ -0.17
VARS2-201ENST00000321897 SELENOPP49908 381 aa14.02□□□□□ -0.17
VARS2-201ENST00000321897 GKN2Q86XP6 184 aa14.02□□□□□ -0.17
VARS2-201ENST00000321897 STEAP2Q8NFT2 490 aa14.02□□□□□ -0.17
VARS2-201ENST00000321897 OR4Q3Q8NH05 313 aa14.02□□□□□ -0.17
VARS2-201ENST00000321897 SLC22A8Q8TCC7 542 aa14.02□□□□□ -0.17
VARS2-201ENST00000321897 TEAD3Q99594 435 aa14.02□□□□□ -0.17
VARS2-201ENST00000321897 ARHGAP9Q9BRR9 750 aa14.02□□□□□ -0.17
VARS2-201ENST00000321897 PRDM7Q9NQW5 492 aa14.02□□□□□ -0.17
VARS2-201ENST00000321897 NPC1O15118 1278 aa14.02□□□□□ -0.17
VARS2-201ENST00000321897 HPXP02790 462 aa14.02□□□□□ -0.17
VARS2-201ENST00000321897 ATP1B1P05026 303 aa14.02□□□□□ -0.17
VARS2-201ENST00000321897 LIMS3P0CW19 117 aa14.02□□□□□ -0.17
VARS2-201ENST00000321897 LIMS4P0CW20 117 aa14.02□□□□□ -0.17
VARS2-201ENST00000321897 PRPH2P23942 346 aa14.02□□□□□ -0.17
VARS2-201ENST00000321897 HSD11B1P28845 292 aa14.02□□□□□ -0.17
VARS2-201ENST00000321897 RGS19P49795 217 aa14.02□□□□□ -0.17
VARS2-201ENST00000321897 FOXL2P58012 376 aa14.02□□□□□ -0.17
VARS2-201ENST00000321897 SLC6A19Q695T7 634 aa14.02□□□□□ -0.17
VARS2-201ENST00000321897 OR6N1Q8NGY5 312 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms