RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 RPS26P11Q5JNZ5 115 aaPredicted RBP12.32□□□□□ -0.44
RPP40-201ENST00000319533 LIPNQ5VXI9 398 aa12.32□□□□□ -0.44
RPP40-201ENST00000319533 NIPAL3Q6P499 406 aa12.32□□□□□ -0.44
RPP40-201ENST00000319533 CLIP4Q8N3C7 705 aa12.32□□□□□ -0.44
RPP40-201ENST00000319533 CADM2Q8N3J6 435 aa12.32□□□□□ -0.44
RPP40-201ENST00000319533 RFLNBQ8N5W9 214 aa12.32□□□□□ -0.44
RPP40-201ENST00000319533 BBS10Q8TAM1 723 aa12.32□□□□□ -0.44
RPP40-201ENST00000319533 MAL2Q969L2 176 aa12.32□□□□□ -0.44
RPP40-201ENST00000319533 SLC35B4Q969S0 331 aa12.32□□□□□ -0.44
RPP40-201ENST00000319533 RNF166Q96A37 237 aaPredicted RBP12.32□□□□□ -0.44
RPP40-201ENST00000319533 PTDSS2Q9BVG9 487 aa12.32□□□□□ -0.44
RPP40-201ENST00000319533 SPATA9Q9BWV2 254 aa12.32□□□□□ -0.44
RPP40-201ENST00000319533 ZNF385DQ9H6B1 395 aa12.32□□□□□ -0.44
RPP40-201ENST00000319533 SEC61A2Q9H9S3 476 aa12.32□□□□□ -0.44
RPP40-201ENST00000319533 BCL2L10Q9HD36 194 aa12.32□□□□□ -0.44
RPP40-201ENST00000319533 SLC52A3Q9NQ40 469 aa12.32□□□□□ -0.44
RPP40-201ENST00000319533 VAPAQ9P0L0 249 aa12.32□□□□□ -0.44
RPP40-201ENST00000319533 SLAMF8Q9P0V8 285 aa12.32□□□□□ -0.44
RPP40-201ENST00000319533 KLHL14Q9P2G3 628 aa12.32□□□□□ -0.44
RPP40-201ENST00000319533 IFT52Q9Y366 437 aa12.32□□□□□ -0.44
RPP40-201ENST00000319533 A0A096LPE4 126 aa12.31□□□□□ -0.44
RPP40-201ENST00000319533 A0A1W2PPZ6 126 aa12.31□□□□□ -0.44
RPP40-201ENST00000319533 PNMTP11086 282 aa12.31□□□□□ -0.44
RPP40-201ENST00000319533 DAOP14920 347 aa12.31□□□□□ -0.44
RPP40-201ENST00000319533 THBS4P35443 961 aa12.31□□□□□ -0.44
RPP40-201ENST00000319533 CHN2P52757 468 aa12.31□□□□□ -0.44
RPP40-201ENST00000319533 TUBA1BP68363 451 aa12.31□□□□□ -0.44
RPP40-201ENST00000319533 TUBA4AP68366 448 aa12.31□□□□□ -0.44
RPP40-201ENST00000319533 ROR2Q01974 943 aaKnown RBP12.31□□□□□ -0.44
RPP40-201ENST00000319533 POU3F1Q03052 451 aaPredicted RBP12.31□□□□□ -0.44
RPP40-201ENST00000319533 EGR4Q05215 589 aa12.31□□□□□ -0.44
RPP40-201ENST00000319533 RIN1Q13671 783 aa12.31□□□□□ -0.44
RPP40-201ENST00000319533 C6orf89Q6UWU4 347 aa12.31□□□□□ -0.44
RPP40-201ENST00000319533 TUBA1AQ71U36 451 aa12.31□□□□□ -0.44
RPP40-201ENST00000319533 DHDDSQ86SQ9 333 aa12.31□□□□□ -0.44
RPP40-201ENST00000319533 MYPOPQ86VE0 399 aaPredicted RBP12.31□□□□□ -0.44
RPP40-201ENST00000319533 KRT73Q86Y46 540 aa12.31□□□□□ -0.44
RPP40-201ENST00000319533 MSRB3Q8IXL7 192 aa12.31□□□□□ -0.44
RPP40-201ENST00000319533 ZNF786Q8N393 782 aa12.31□□□□□ -0.44
RPP40-201ENST00000319533 TSPEARQ8WU66 669 aa12.31□□□□□ -0.44
RPP40-201ENST00000319533 ANKRD27Q96NW4 1050 aa12.31□□□□□ -0.44
RPP40-201ENST00000319533 B3GAT1Q9P2W7 334 aa12.31□□□□□ -0.44
RPP40-201ENST00000319533 GMEB1Q9Y692 573 aa12.31□□□□□ -0.44
RPP40-201ENST00000319533 TRBV5-3A0A0A0MS03 114 aa12.3□□□□□ -0.44
RPP40-201ENST00000319533 IGHV2OR16-5A0A0B4J2B6 119 aa12.3□□□□□ -0.44
RPP40-201ENST00000319533 LOC102725191A0A1B0GVB3 256 aa12.3□□□□□ -0.44
RPP40-201ENST00000319533 LRP5LA4QPB2 252 aa12.3□□□□□ -0.44
RPP40-201ENST00000319533 VSTM5A8MXK1 200 aa12.3□□□□□ -0.44
RPP40-201ENST00000319533 hCG_2039718K7EN88 272 aa12.3□□□□□ -0.44
RPP40-201ENST00000319533 AHSA1O95433 338 aa12.3□□□□□ -0.44
RPP40-201ENST00000319533 CELA3BP08861 270 aa12.3□□□□□ -0.44
RPP40-201ENST00000319533 NPR2P20594 1047 aa12.3□□□□□ -0.44
RPP40-201ENST00000319533 ARR3P36575 388 aa12.3□□□□□ -0.44
RPP40-201ENST00000319533 ARF1P84077 181 aaKnown RBP12.3□□□□□ -0.44
RPP40-201ENST00000319533 CDK6Q00534 326 aa12.3□□□□□ -0.44
RPP40-201ENST00000319533 ZNF311Q5JNZ3 666 aa12.3□□□□□ -0.44
RPP40-201ENST00000319533 VHLLQ6RSH7 139 aa12.3□□□□□ -0.44
RPP40-201ENST00000319533 SERPINA11Q86U17 422 aa12.3□□□□□ -0.44
RPP40-201ENST00000319533 CCDC36Q8IYA8 594 aa12.3□□□□□ -0.44
RPP40-201ENST00000319533 DPP10Q8N608 796 aa12.3□□□□□ -0.44
RPP40-201ENST00000319533 IL17RDQ8NFM7 739 aa12.3□□□□□ -0.44
RPP40-201ENST00000319533 SPATA5L1Q9BVQ7 753 aa12.3□□□□□ -0.44
RPP40-201ENST00000319533 C12orf10Q9HB07 376 aa12.3□□□□□ -0.44
RPP40-201ENST00000319533 GPR35Q9HC97 309 aa12.3□□□□□ -0.44
RPP40-201ENST00000319533 ZNF503-AS2A6NEH8 195 aa12.29□□□□□ -0.44
RPP40-201ENST00000319533 SLC43A1O75387 559 aa12.29□□□□□ -0.44
RPP40-201ENST00000319533 ERCC1P07992 297 aaPredicted RBP12.29□□□□□ -0.44
RPP40-201ENST00000319533 ARAFP10398 606 aa12.29□□□□□ -0.44
RPP40-201ENST00000319533 ETS2P15036 469 aa12.29□□□□□ -0.44
RPP40-201ENST00000319533 ZNF43P17038 809 aa12.29□□□□□ -0.44
RPP40-201ENST00000319533 GPX2P18283 190 aa12.29□□□□□ -0.44
RPP40-201ENST00000319533 SLC6A2P23975 617 aa12.29□□□□□ -0.44
RPP40-201ENST00000319533 IL2RGP31785 369 aa12.29□□□□□ -0.44
RPP40-201ENST00000319533 CDH15P55291 814 aa12.29□□□□□ -0.44
RPP40-201ENST00000319533 CLDN17P56750 224 aa12.29□□□□□ -0.44
RPP40-201ENST00000319533 NFYCQ13952 458 aa12.29□□□□□ -0.44
RPP40-201ENST00000319533 SCARB2Q14108 478 aa12.29□□□□□ -0.44
RPP40-201ENST00000319533 RUNDC3AQ59EK9 446 aa12.29□□□□□ -0.44
RPP40-201ENST00000319533 REEP3Q6NUK4 255 aa12.29□□□□□ -0.44
RPP40-201ENST00000319533 UGT2A3Q6UWM9 527 aa12.29□□□□□ -0.44
RPP40-201ENST00000319533 DLEU7Q6UYE1 221 aa12.29□□□□□ -0.44
RPP40-201ENST00000319533 KDM8Q8N371 416 aa12.29□□□□□ -0.44
RPP40-201ENST00000319533 LINC01356Q8N9X3 169 aa12.29□□□□□ -0.44
RPP40-201ENST00000319533 NFKBIDQ8NI38 313 aa12.29□□□□□ -0.44
RPP40-201ENST00000319533 OXGR1Q96P68 337 aa12.29□□□□□ -0.44
RPP40-201ENST00000319533 CPPED1Q9BRF8 314 aaPredicted RBP12.29□□□□□ -0.44
RPP40-201ENST00000319533 TMEM38AQ9H6F2 299 aa12.29□□□□□ -0.44
RPP40-201ENST00000319533 TMEFF2Q9UIK5 374 aaPredicted RBP12.29□□□□□ -0.44
RPP40-201ENST00000319533 TCF21O43680 179 aa12.28□□□□□ -0.44
RPP40-201ENST00000319533 APEX1P27695 318 aaKnown RBP12.28□□□□□ -0.44
RPP40-201ENST00000319533 PRKAR1BP31321 381 aa12.28□□□□□ -0.44
RPP40-201ENST00000319533 RPS5P46782 204 aaKnown RBP12.28□□□□□ -0.44
RPP40-201ENST00000319533 EVX1P49640 407 aa12.28□□□□□ -0.44
RPP40-201ENST00000319533 MAPRE2Q15555 327 aa12.28□□□□□ -0.44
RPP40-201ENST00000319533 CYP51A1Q16850 503 aa12.28□□□□□ -0.44
RPP40-201ENST00000319533 GKAP1Q5VSY0 366 aaPredicted RBP12.28□□□□□ -0.44
RPP40-201ENST00000319533 C5orf46Q6UWT4 87 aa12.28□□□□□ -0.44
RPP40-201ENST00000319533 MEX3DQ86XN8 651 aaKnown RBP12.28□□□□□ -0.44
RPP40-201ENST00000319533 TMEM123Q8N131 208 aa12.28□□□□□ -0.44
RPP40-201ENST00000319533 ZCCHC24Q8N2G6 241 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms